RNA–Protein interactions for RNA: ENST00000454555.2

LINC00343-203, long intergenic non-protein coding RNA 343, humanhuman

TSL 2 BASIC

Gene LINC00343, Length 1,765 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-203ENST00000454555 KIAA1024LP59773 190 aa12.52□□□□□ -0.41
LINC00343-203ENST00000454555 MRPS15P82914 257 aaKnown RBP12.52□□□□□ -0.41
LINC00343-203ENST00000454555 CDK3Q00526 305 aa12.52□□□□□ -0.41
LINC00343-203ENST00000454555 TCF15Q12870 199 aa12.52□□□□□ -0.41
LINC00343-203ENST00000454555 HEPACAMQ14CZ8 416 aa12.52□□□□□ -0.41
LINC00343-203ENST00000454555 SF1Q15637 639 aaKnown RBP12.52□□□□□ -0.41
LINC00343-203ENST00000454555 CLPPQ16740 277 aaPredicted RBP12.52□□□□□ -0.41
LINC00343-203ENST00000454555 KLHL22Q53GT1 634 aa12.52□□□□□ -0.41
LINC00343-203ENST00000454555 PEAR1Q5VY43 1037 aaPredicted RBP12.52□□□□□ -0.41
LINC00343-203ENST00000454555 NXPE4Q6UWF7 544 aa12.52□□□□□ -0.41
LINC00343-203ENST00000454555 SLC34A3Q8N130 599 aa12.52□□□□□ -0.41
LINC00343-203ENST00000454555 KRT78Q8N1N4 520 aa12.52□□□□□ -0.41
LINC00343-203ENST00000454555 ZNF480Q8WV37 535 aa12.52□□□□□ -0.41
LINC00343-203ENST00000454555 SLC5A11Q8WWX8 675 aa12.52□□□□□ -0.41
LINC00343-203ENST00000454555 NR4A3Q92570 626 aa12.52□□□□□ -0.41
LINC00343-203ENST00000454555 LOXL4Q96JB6 756 aa12.52□□□□□ -0.41
LINC00343-203ENST00000454555 ZNF354BQ96LW1 612 aa12.52□□□□□ -0.41
LINC00343-203ENST00000454555 SLC6A18Q96N87 628 aa12.52□□□□□ -0.41
LINC00343-203ENST00000454555 COQ7Q99807 217 aa12.52□□□□□ -0.41
LINC00343-203ENST00000454555 POLR2J2Q9GZM3 115 aaKnown RBP12.52□□□□□ -0.41
LINC00343-203ENST00000454555 PHPT1Q9NRX4 125 aaPredicted RBP12.52□□□□□ -0.41
LINC00343-203ENST00000454555 GPR27Q9NS67 375 aa12.52□□□□□ -0.41
LINC00343-203ENST00000454555 DDX28Q9NUL7 540 aaKnown RBP12.52□□□□□ -0.41
LINC00343-203ENST00000454555 CA5BQ9Y2D0 317 aa12.52□□□□□ -0.41
LINC00343-203ENST00000454555 MTX2O75431 263 aa12.51□□□□□ -0.41
LINC00343-203ENST00000454555 RAB36O95755 333 aa12.51□□□□□ -0.41
LINC00343-203ENST00000454555 NPPBP16860 134 aa12.51□□□□□ -0.41
LINC00343-203ENST00000454555 CPEP16870 476 aa12.51□□□□□ -0.41
LINC00343-203ENST00000454555 ELAVL4P26378 380 aaKnown RBP12.51□□□□□ -0.41
LINC00343-203ENST00000454555 CD38P28907 300 aa12.51□□□□□ -0.41
LINC00343-203ENST00000454555 MLLT3P42568 568 aaPredicted RBP12.51□□□□□ -0.41
LINC00343-203ENST00000454555 SLC9A3P48764 834 aa12.51□□□□□ -0.41
LINC00343-203ENST00000454555 CRISP3P54108 245 aa12.51□□□□□ -0.41
LINC00343-203ENST00000454555 ZNF91Q05481 1191 aa12.51□□□□□ -0.41
LINC00343-203ENST00000454555 TMEM115Q12893 351 aaPredicted RBP12.51□□□□□ -0.41
LINC00343-203ENST00000454555 GANABQ14697 944 aaKnown RBP12.51□□□□□ -0.41
LINC00343-203ENST00000454555 LARS2Q15031 903 aaKnown RBP12.51□□□□□ -0.41
LINC00343-203ENST00000454555 CARTPTQ16568 116 aa12.51□□□□□ -0.41
LINC00343-203ENST00000454555 MPEG1Q2M385 716 aa12.51□□□□□ -0.41
LINC00343-203ENST00000454555 GLYR1Q49A26 553 aaPredicted RBP12.51□□□□□ -0.41
LINC00343-203ENST00000454555 C3orf38Q5JPI3 329 aa12.51□□□□□ -0.41
LINC00343-203ENST00000454555 DDI2Q5TDH0 399 aa12.51□□□□□ -0.41
LINC00343-203ENST00000454555 METAP1DQ6UB28 335 aaPredicted RBP12.51□□□□□ -0.41
LINC00343-203ENST00000454555 Q6ZSR6 202 aa12.51□□□□□ -0.41
LINC00343-203ENST00000454555 VWA5B2Q8N398 1253 aa12.51□□□□□ -0.41
LINC00343-203ENST00000454555 RASGEF1AQ8N9B8 481 aa12.51□□□□□ -0.41
LINC00343-203ENST00000454555 OR9A1PQ8NGU1 263 aa12.51□□□□□ -0.41
LINC00343-203ENST00000454555 ST6GAL2Q96JF0 529 aa12.51□□□□□ -0.41
LINC00343-203ENST00000454555 ZNF514Q96K75 400 aaPredicted RBP12.51□□□□□ -0.41
LINC00343-203ENST00000454555 QRFPRQ96P65 431 aa12.51□□□□□ -0.41
LINC00343-203ENST00000454555 DEPDC7Q96QD5 511 aa12.51□□□□□ -0.41
LINC00343-203ENST00000454555 LGR4Q9BXB1 951 aa12.51□□□□□ -0.41
LINC00343-203ENST00000454555 MIR1-1HGQ9H1L0 117 aa12.51□□□□□ -0.41
LINC00343-203ENST00000454555 TRIM39Q9HCM9 518 aa12.51□□□□□ -0.41
LINC00343-203ENST00000454555 MRPS18AQ9NVS2 196 aaKnown RBP12.51□□□□□ -0.41
LINC00343-203ENST00000454555 SUSD2Q9UGT4 822 aa12.51□□□□□ -0.41
LINC00343-203ENST00000454555 PILRBQ9UKJ0 227 aa12.51□□□□□ -0.41
LINC00343-203ENST00000454555 OR1A2Q9Y585 309 aa12.51□□□□□ -0.41
LINC00343-203ENST00000454555 SLCO1B1Q9Y6L6 691 aa12.51□□□□□ -0.41
LINC00343-203ENST00000454555 MEIOCA2RUB1 952 aa12.51□□□□□ -0.41
LINC00343-203ENST00000454555 CCDC182A6NF36 153 aa12.51□□□□□ -0.41
LINC00343-203ENST00000454555 H0Y8X5 98 aa12.51□□□□□ -0.41
LINC00343-203ENST00000454555 BCAT2O15382 392 aaPredicted RBP12.51□□□□□ -0.41
LINC00343-203ENST00000454555 MFN2O95140 757 aa12.51□□□□□ -0.41
LINC00343-203ENST00000454555 RECKO95980 971 aa12.51□□□□□ -0.41
LINC00343-203ENST00000454555 ALPPP05187 535 aa12.51□□□□□ -0.41
LINC00343-203ENST00000454555 POU2F1P14859 743 aa12.51□□□□□ -0.41
LINC00343-203ENST00000454555 KELP23276 732 aa12.51□□□□□ -0.41
LINC00343-203ENST00000454555 ZNF79Q15937 498 aa12.51□□□□□ -0.41
LINC00343-203ENST00000454555 ZNF658BQ4V348 819 aaPredicted RBP12.51□□□□□ -0.41
LINC00343-203ENST00000454555 TIGD3Q6B0B8 471 aa12.51□□□□□ -0.41
LINC00343-203ENST00000454555 CEACAM20Q6UY09 585 aa12.51□□□□□ -0.41
LINC00343-203ENST00000454555 PHC2Q8IXK0 858 aa12.51□□□□□ -0.41
LINC00343-203ENST00000454555 RDH10Q8IZV5 341 aa12.51□□□□□ -0.41
LINC00343-203ENST00000454555 GPR151Q8TDV0 419 aa12.51□□□□□ -0.41
LINC00343-203ENST00000454555 CIDECQ96AQ7 238 aaPredicted RBP12.51□□□□□ -0.41
LINC00343-203ENST00000454555 KLHDC7BQ96G42 594 aa12.51□□□□□ -0.41
LINC00343-203ENST00000454555 TSSK6Q9BXA6 273 aa12.51□□□□□ -0.41
LINC00343-203ENST00000454555 PRRG3Q9BZD7 231 aa12.51□□□□□ -0.41
LINC00343-203ENST00000454555 BARHL1Q9BZE3 327 aa12.51□□□□□ -0.41
LINC00343-203ENST00000454555 PITHD1Q9GZP4 211 aaPredicted RBP12.51□□□□□ -0.41
LINC00343-203ENST00000454555 POLR2J3Q9H1A7 115 aaKnown RBP12.51□□□□□ -0.41
LINC00343-203ENST00000454555 C14orf119Q9NWQ9 140 aa12.51□□□□□ -0.41
LINC00343-203ENST00000454555 TAS2R16Q9NYV7 291 aa12.51□□□□□ -0.41
LINC00343-203ENST00000454555 R4GN57 208 aa12.51□□□□□ -0.41
LINC00343-203ENST00000454555 C17orf113A0A1B0GUU1 675 aa12.5□□□□□ -0.41
LINC00343-203ENST00000454555 A0A1W2PRQ8 180 aa12.5□□□□□ -0.41
LINC00343-203ENST00000454555 TMEM129A0AVI4 362 aa12.5□□□□□ -0.41
LINC00343-203ENST00000454555 TMEM202A6NGA9 273 aa12.5□□□□□ -0.41
LINC00343-203ENST00000454555 OR10H3O60404 316 aa12.5□□□□□ -0.41
LINC00343-203ENST00000454555 HCN1O60741 890 aa12.5□□□□□ -0.41
LINC00343-203ENST00000454555 WNT1P04628 370 aa12.5□□□□□ -0.41
LINC00343-203ENST00000454555 THEGLP0DJG4 465 aa12.5□□□□□ -0.41
LINC00343-203ENST00000454555 NR2F6P10588 404 aa12.5□□□□□ -0.41
LINC00343-203ENST00000454555 GNSP15586 552 aa12.5□□□□□ -0.41
LINC00343-203ENST00000454555 DDCP20711 480 aa12.5□□□□□ -0.41
LINC00343-203ENST00000454555 MAGP20916 626 aa12.5□□□□□ -0.41
LINC00343-203ENST00000454555 GSTM3P21266 225 aa12.5□□□□□ -0.41
LINC00343-203ENST00000454555 CFL1P23528 166 aaKnown RBP12.5□□□□□ -0.41
LINC00343-203ENST00000454555 HLA-DMAP28067 261 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms