RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 PGRMC2O15173 223 aa12.94□□□□□ -0.34
LYSMD3-202ENST00000453259 SIAH2O43255 324 aa12.94□□□□□ -0.34
LYSMD3-202ENST00000453259 EMC8O43402 210 aa12.94□□□□□ -0.34
LYSMD3-202ENST00000453259 CRLF1O75462 422 aa12.94□□□□□ -0.34
LYSMD3-202ENST00000453259 CSNK2A2P19784 350 aaPredicted RBP12.94□□□□□ -0.34
LYSMD3-202ENST00000453259 NT5EP21589 574 aa12.94□□□□□ -0.34
LYSMD3-202ENST00000453259 GMPRP36959 345 aa12.94□□□□□ -0.34
LYSMD3-202ENST00000453259 PPICP45877 212 aa12.94□□□□□ -0.34
LYSMD3-202ENST00000453259 PTH2RP49190 550 aa12.94□□□□□ -0.34
LYSMD3-202ENST00000453259 ALDH18A1P54886 795 aaKnown RBP12.94□□□□□ -0.34
LYSMD3-202ENST00000453259 HMGCS1Q01581 520 aa12.94□□□□□ -0.34
LYSMD3-202ENST00000453259 SRYQ05066 204 aa12.94□□□□□ -0.34
LYSMD3-202ENST00000453259 ETFDHQ16134 617 aa12.94□□□□□ -0.34
LYSMD3-202ENST00000453259 PRICKLE4Q2TBC4 344 aa12.94□□□□□ -0.34
LYSMD3-202ENST00000453259 PLEKHM3Q6ZWE6 761 aa12.94□□□□□ -0.34
LYSMD3-202ENST00000453259 RAPH1Q70E73 1250 aa12.94□□□□□ -0.34
LYSMD3-202ENST00000453259 P4HA3Q7Z4N8 544 aa12.94□□□□□ -0.34
LYSMD3-202ENST00000453259 PRR22Q8IZ63 422 aa12.94□□□□□ -0.34
LYSMD3-202ENST00000453259 MEIOBQ8N635 442 aa12.94□□□□□ -0.34
LYSMD3-202ENST00000453259 DOK4Q8TEW6 326 aa12.94□□□□□ -0.34
LYSMD3-202ENST00000453259 IGFBPL1Q8WX77 278 aa12.94□□□□□ -0.34
LYSMD3-202ENST00000453259 STARD4Q96DR4 205 aa12.94□□□□□ -0.34
LYSMD3-202ENST00000453259 SLC35A4Q96G79 324 aa12.94□□□□□ -0.34
LYSMD3-202ENST00000453259 MARK4Q96L34 752 aa12.94□□□□□ -0.34
LYSMD3-202ENST00000453259 SFXN2Q96NB2 322 aa12.94□□□□□ -0.34
LYSMD3-202ENST00000453259 FAM111AQ96PZ2 611 aa12.94□□□□□ -0.34
LYSMD3-202ENST00000453259 NODALQ96S42 347 aa12.94□□□□□ -0.34
LYSMD3-202ENST00000453259 GALNT9Q9HCQ5 603 aa12.94□□□□□ -0.34
LYSMD3-202ENST00000453259 ZNF701Q9NV72 531 aaPredicted RBP12.94□□□□□ -0.34
LYSMD3-202ENST00000453259 KLHL28Q9NXS3 571 aa12.94□□□□□ -0.34
LYSMD3-202ENST00000453259 ZNF639Q9UID6 485 aa12.94□□□□□ -0.34
LYSMD3-202ENST00000453259 PSME2Q9UL46 239 aa12.94□□□□□ -0.34
LYSMD3-202ENST00000453259 ZNF175Q9Y473 711 aa12.94□□□□□ -0.34
LYSMD3-202ENST00000453259 WIF1Q9Y5W5 379 aa12.94□□□□□ -0.34
LYSMD3-202ENST00000453259 TRIM64A6NGJ6 449 aa12.93□□□□□ -0.34
LYSMD3-202ENST00000453259 TRIM64BA6NI03 449 aa12.93□□□□□ -0.34
LYSMD3-202ENST00000453259 WASHC1A8K0Z3 465 aa12.93□□□□□ -0.34
LYSMD3-202ENST00000453259 EFCAB8A8MWE9 144 aa12.93□□□□□ -0.34
LYSMD3-202ENST00000453259 UGT2B11O75310 529 aa12.93□□□□□ -0.34
LYSMD3-202ENST00000453259 BCAS2O75934 225 aaPredicted RBP12.93□□□□□ -0.34
LYSMD3-202ENST00000453259 SMNDC1O75940 238 aaKnown RBP eCLIP12.93□□□□□ -0.34
LYSMD3-202ENST00000453259 ALDOAP04075 364 aaKnown RBP12.93□□□□□ -0.34
LYSMD3-202ENST00000453259 PEPDP12955 493 aa12.93□□□□□ -0.34
LYSMD3-202ENST00000453259 MTHFD2P13995 350 aa12.93□□□□□ -0.34
LYSMD3-202ENST00000453259 POU2F1P14859 743 aa12.93□□□□□ -0.34
LYSMD3-202ENST00000453259 NR1H2P55055 460 aa12.93□□□□□ -0.34
LYSMD3-202ENST00000453259 MRPS22P82650 360 aaKnown RBP12.93□□□□□ -0.34
LYSMD3-202ENST00000453259 FAM27E3Q08E93 113 aa12.93□□□□□ -0.34
LYSMD3-202ENST00000453259 NAB1Q13506 487 aa12.93□□□□□ -0.34
LYSMD3-202ENST00000453259 EFR3AQ14156 821 aa12.93□□□□□ -0.34
LYSMD3-202ENST00000453259 CPSF6Q16630 551 aaKnown RBP eCLIP12.93□□□□□ -0.34
LYSMD3-202ENST00000453259 FAM83EQ2M2I3 478 aa12.93□□□□□ -0.34
LYSMD3-202ENST00000453259 SLC48A1Q6P1K1 146 aa12.93□□□□□ -0.34
LYSMD3-202ENST00000453259 SLC35F6Q8N357 371 aa12.93□□□□□ -0.34
LYSMD3-202ENST00000453259 RNF175Q8N4F7 328 aa12.93□□□□□ -0.34
LYSMD3-202ENST00000453259 TMEM171Q8WVE6 324 aa12.93□□□□□ -0.34
LYSMD3-202ENST00000453259 PGM2Q96G03 612 aa12.93□□□□□ -0.34
LYSMD3-202ENST00000453259 COL21A1Q96P44 957 aa12.93□□□□□ -0.34
LYSMD3-202ENST00000453259 ITPAQ9BY32 194 aa12.93□□□□□ -0.34
LYSMD3-202ENST00000453259 IPPKQ9H8X2 491 aa12.93□□□□□ -0.34
LYSMD3-202ENST00000453259 FANCFQ9NPI8 374 aa12.93□□□□□ -0.34
LYSMD3-202ENST00000453259 DKKL1Q9UK85 242 aa12.93□□□□□ -0.34
LYSMD3-202ENST00000453259 DTX4Q9Y2E6 619 aa12.93□□□□□ -0.34
LYSMD3-202ENST00000453259 RAI1Q7Z5J4 1906 aaPredicted RBP12.93□□□□□ -0.34
LYSMD3-202ENST00000453259 MED12LQ86YW9 2145 aa12.92□□□□□ -0.34
LYSMD3-202ENST00000453259 A0A087X1B8 175 aa12.92□□□□□ -0.34
LYSMD3-202ENST00000453259 CXorf49A8MYA2 514 aaPredicted RBP12.92□□□□□ -0.34
LYSMD3-202ENST00000453259 TNFRSF21O75509 655 aa12.92□□□□□ -0.34
LYSMD3-202ENST00000453259 CLDN9O95484 217 aa12.92□□□□□ -0.34
LYSMD3-202ENST00000453259 TGM6O95932 706 aa12.92□□□□□ -0.34
LYSMD3-202ENST00000453259 FCGR2AP12318 317 aa12.92□□□□□ -0.34
LYSMD3-202ENST00000453259 GFAPP14136 432 aa12.92□□□□□ -0.34
LYSMD3-202ENST00000453259 CCKARP32238 428 aa12.92□□□□□ -0.34
LYSMD3-202ENST00000453259 DEKP35659 375 aaKnown RBP12.92□□□□□ -0.34
LYSMD3-202ENST00000453259 GANABQ14697 944 aaKnown RBP12.92□□□□□ -0.34
LYSMD3-202ENST00000453259 ACAP2Q15057 778 aa12.92□□□□□ -0.34
LYSMD3-202ENST00000453259 BEX5Q5H9J7 111 aa12.92□□□□□ -0.34
LYSMD3-202ENST00000453259 SAMD14Q8IZD0 417 aaPredicted RBP12.92□□□□□ -0.34
LYSMD3-202ENST00000453259 CNEP1R1Q8N9A8 125 aa12.92□□□□□ -0.34
LYSMD3-202ENST00000453259 RNF138Q8WVD3 245 aa12.92□□□□□ -0.34
LYSMD3-202ENST00000453259 NANOS1Q8WY41 292 aaKnown RBP12.92□□□□□ -0.34
LYSMD3-202ENST00000453259 ZNF845Q96IR2 970 aaPredicted RBP12.92□□□□□ -0.34
LYSMD3-202ENST00000453259 BTBD9Q96Q07 612 aa12.92□□□□□ -0.34
LYSMD3-202ENST00000453259 BRINP2Q9C0B6 783 aa12.92□□□□□ -0.34
LYSMD3-202ENST00000453259 MAT2BQ9NZL9 334 aa12.92□□□□□ -0.34
LYSMD3-202ENST00000453259 BCAP29Q9UHQ4 241 aa12.92□□□□□ -0.34
LYSMD3-202ENST00000453259 ADAM21Q9UKJ8 722 aa12.92□□□□□ -0.34
LYSMD3-202ENST00000453259 PCDHA9Q9Y5H5 950 aa12.92□□□□□ -0.34
LYSMD3-202ENST00000453259 FBN1P35555 2871 aaKnown RBP12.92□□□□□ -0.34
LYSMD3-202ENST00000453259 ZSCAN12O43309 604 aa12.91□□□□□ -0.34
LYSMD3-202ENST00000453259 IFNA2P01563 188 aa12.91□□□□□ -0.34
LYSMD3-202ENST00000453259 CNTFP26441 200 aa12.91□□□□□ -0.34
LYSMD3-202ENST00000453259 SSTR1P30872 391 aa12.91□□□□□ -0.34
LYSMD3-202ENST00000453259 KRT20P35900 424 aa12.91□□□□□ -0.34
LYSMD3-202ENST00000453259 MAPK12P53778 367 aa12.91□□□□□ -0.34
LYSMD3-202ENST00000453259 DSCR4P56555 118 aaPredicted RBP12.91□□□□□ -0.34
LYSMD3-202ENST00000453259 MGAT2Q10469 447 aa12.91□□□□□ -0.34
LYSMD3-202ENST00000453259 CALCOCO2Q13137 446 aa12.91□□□□□ -0.34
LYSMD3-202ENST00000453259 GTF2H2Q13888 395 aa12.91□□□□□ -0.34
LYSMD3-202ENST00000453259 SLMAPQ14BN4 828 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms