RNA–Protein interactions for RNA: ENST00000449307.3

AC006001.3-201, humanhuman

TSL 3 BASIC

Gene AC006001.3, Length 7,092 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006001.3-201ENST00000449307 NSUN5Q96P11 429 aaKnown RBP12.1□□□□□ -0.47
AC006001.3-201ENST00000449307 FOXQ1Q9C009 403 aa12.1□□□□□ -0.47
AC006001.3-201ENST00000449307 NUDT15Q9NV35 164 aa12.1□□□□□ -0.47
AC006001.3-201ENST00000449307 PIK3C2AO00443 1686 aa12.1□□□□□ -0.47
AC006001.3-201ENST00000449307 EPHA1P21709 976 aa12.1□□□□□ -0.47
AC006001.3-201ENST00000449307 GNMTQ14749 295 aa12.1□□□□□ -0.47
AC006001.3-201ENST00000449307 PRAMEF20Q5VT98 475 aa12.1□□□□□ -0.47
AC006001.3-201ENST00000449307 CRELD2Q6UXH1 353 aaPredicted RBP12.1□□□□□ -0.47
AC006001.3-201ENST00000449307 H1FXQ92522 213 aaKnown RBP12.1□□□□□ -0.47
AC006001.3-201ENST00000449307 HS6ST2Q96MM7 605 aa12.1□□□□□ -0.47
AC006001.3-201ENST00000449307 HIF1ANQ9NWT6 349 aa12.1□□□□□ -0.47
AC006001.3-201ENST00000449307 OR14J1Q9UGF5 321 aa12.1□□□□□ -0.47
AC006001.3-201ENST00000449307 AP1M2Q9Y6Q5 423 aa12.1□□□□□ -0.47
AC006001.3-201ENST00000449307 UGT3A2Q3SY77 523 aa12.1□□□□□ -0.47
AC006001.3-201ENST00000449307 KDELC1Q6UW63 502 aa12.1□□□□□ -0.47
AC006001.3-201ENST00000449307 VN1R2Q8NFZ6 395 aa12.1□□□□□ -0.47
AC006001.3-201ENST00000449307 STON2Q8WXE9 905 aa12.1□□□□□ -0.47
AC006001.3-201ENST00000449307 DMRTB1Q96MA1 342 aa12.1□□□□□ -0.47
AC006001.3-201ENST00000449307 SLC2A13Q96QE2 648 aa12.1□□□□□ -0.47
AC006001.3-201ENST00000449307 VRK1Q99986 396 aaPredicted RBP12.1□□□□□ -0.47
AC006001.3-201ENST00000449307 ACTRT3Q9BYD9 372 aa12.1□□□□□ -0.47
AC006001.3-201ENST00000449307 CALHM2Q9HA72 323 aa12.1□□□□□ -0.47
AC006001.3-201ENST00000449307 CUTCQ9NTM9 273 aa12.1□□□□□ -0.47
AC006001.3-201ENST00000449307 FAM159BA6NKW6 160 aa12.09□□□□□ -0.47
AC006001.3-201ENST00000449307 NUDT21O43809 227 aaKnown RBP12.09□□□□□ -0.47
AC006001.3-201ENST00000449307 AK1P00568 194 aa12.09□□□□□ -0.47
AC006001.3-201ENST00000449307 GTF2F2P13984 249 aa12.09□□□□□ -0.47
AC006001.3-201ENST00000449307 CTHP32929 405 aa12.09□□□□□ -0.47
AC006001.3-201ENST00000449307 CSNK1A1P48729 337 aa12.09□□□□□ -0.47
AC006001.3-201ENST00000449307 ZNF33AQ06730 810 aa12.09□□□□□ -0.47
AC006001.3-201ENST00000449307 COL9A3Q14050 684 aaPredicted RBP12.09□□□□□ -0.47
AC006001.3-201ENST00000449307 DAG1Q14118 895 aa12.09□□□□□ -0.47
AC006001.3-201ENST00000449307 CST9Q5W186 159 aa12.09□□□□□ -0.47
AC006001.3-201ENST00000449307 OR5L1Q8NGL2 311 aa12.09□□□□□ -0.47
AC006001.3-201ENST00000449307 OR9I1Q8NGQ6 314 aa12.09□□□□□ -0.47
AC006001.3-201ENST00000449307 KCND1Q9NSA2 647 aa12.09□□□□□ -0.47
AC006001.3-201ENST00000449307 BAZ2AQ9UIF9 1905 aaKnown RBP12.09□□□□□ -0.47
AC006001.3-201ENST00000449307 FAM230AA0A1W2PPH8 454 aa12.09□□□□□ -0.47
AC006001.3-201ENST00000449307 C15orf40Q8WUR7 153 aa12.09□□□□□ -0.47
AC006001.3-201ENST00000449307 UCN3Q969E3 161 aa12.09□□□□□ -0.47
AC006001.3-201ENST00000449307 FAM46AQ96IP4 442 aaKnown RBP12.09□□□□□ -0.47
AC006001.3-201ENST00000449307 MAN2C1Q9NTJ4 1040 aa12.09□□□□□ -0.47
AC006001.3-201ENST00000449307 FAM118AQ9NWS6 357 aa12.09□□□□□ -0.47
AC006001.3-201ENST00000449307 ANHXE9PGG2 379 aa12.09□□□□□ -0.47
AC006001.3-201ENST00000449307 YKT6O15498 198 aa12.09□□□□□ -0.47
AC006001.3-201ENST00000449307 PEX2P28328 305 aa12.09□□□□□ -0.47
AC006001.3-201ENST00000449307 AFF1P51825 1210 aaKnown RBP12.09□□□□□ -0.47
AC006001.3-201ENST00000449307 EIF2B1Q14232 305 aaKnown RBP12.09□□□□□ -0.47
AC006001.3-201ENST00000449307 TMEM69Q5SWH9 247 aa12.09□□□□□ -0.47
AC006001.3-201ENST00000449307 SIAH1Q8IUQ4 282 aa12.09□□□□□ -0.47
AC006001.3-201ENST00000449307 OR8H3Q8N146 312 aa12.09□□□□□ -0.47
AC006001.3-201ENST00000449307 ZNF334Q9HCZ1 680 aaPredicted RBP12.09□□□□□ -0.47
AC006001.3-201ENST00000449307 SACM1LQ9NTJ5 587 aa12.09□□□□□ -0.47
AC006001.3-201ENST00000449307 SCP2D1Q9UJQ7 156 aa12.09□□□□□ -0.47
AC006001.3-201ENST00000449307 AURKAO14965 403 aa12.09□□□□□ -0.47
AC006001.3-201ENST00000449307 AP1G1O43747 822 aa12.09□□□□□ -0.47
AC006001.3-201ENST00000449307 ZNF12P17014 697 aa12.09□□□□□ -0.47
AC006001.3-201ENST00000449307 FRKP42685 505 aaPredicted RBP12.09□□□□□ -0.47
AC006001.3-201ENST00000449307 DCDP81605 110 aaKnown RBP12.09□□□□□ -0.47
AC006001.3-201ENST00000449307 TLDC1Q6P9B6 456 aa12.09□□□□□ -0.47
AC006001.3-201ENST00000449307 DTX3Q8N9I9 347 aa12.09□□□□□ -0.47
AC006001.3-201ENST00000449307 OR4K13Q8NH42 304 aa12.09□□□□□ -0.47
AC006001.3-201ENST00000449307 MYRFLQ96LU7 910 aa12.09□□□□□ -0.47
AC006001.3-201ENST00000449307 PLEK2Q9NYT0 353 aa12.09□□□□□ -0.47
AC006001.3-201ENST00000449307 LOC105369274A0A096LPK9 316 aa12.09□□□□□ -0.47
AC006001.3-201ENST00000449307 ARGFXA6NJG6 315 aa12.09□□□□□ -0.47
AC006001.3-201ENST00000449307 PTGESO14684 152 aa12.09□□□□□ -0.47
AC006001.3-201ENST00000449307 MRPL33O75394 65 aaKnown RBP12.09□□□□□ -0.47
AC006001.3-201ENST00000449307 MAT1AQ00266 395 aaKnown RBP12.09□□□□□ -0.47
AC006001.3-201ENST00000449307 DEFB109BQ30KR1 87 aa12.09□□□□□ -0.47
AC006001.3-201ENST00000449307 HSD17B12Q53GQ0 312 aa12.09□□□□□ -0.47
AC006001.3-201ENST00000449307 ZNF554Q86TJ5 538 aa12.09□□□□□ -0.47
AC006001.3-201ENST00000449307 PDSS2Q86YH6 399 aa12.09□□□□□ -0.47
AC006001.3-201ENST00000449307 OR4N4Q8N0Y3 316 aa12.09□□□□□ -0.47
AC006001.3-201ENST00000449307 IFI44Q8TCB0 444 aa12.09□□□□□ -0.47
AC006001.3-201ENST00000449307 RFT1Q96AA3 541 aa12.09□□□□□ -0.47
AC006001.3-201ENST00000449307 TAS2R10Q9NYW0 307 aa12.09□□□□□ -0.47
AC006001.3-201ENST00000449307 CITO14578 2027 aa12.09□□□□□ -0.47
AC006001.3-201ENST00000449307 NPIPA5A0A0B4J1W7 369 aa12.09□□□□□ -0.47
AC006001.3-201ENST00000449307 NPIPA7E9PJI5 369 aa12.09□□□□□ -0.47
AC006001.3-201ENST00000449307 NPIPA8P0DM63 369 aa12.09□□□□□ -0.47
AC006001.3-201ENST00000449307 UBL4AP11441 157 aa12.09□□□□□ -0.47
AC006001.3-201ENST00000449307 TMEM11P17152 192 aa12.09□□□□□ -0.47
AC006001.3-201ENST00000449307 SSR4P51571 173 aa12.09□□□□□ -0.47
AC006001.3-201ENST00000449307 NFATC4Q14934 902 aa12.09□□□□□ -0.47
AC006001.3-201ENST00000449307 LRRC37A5PQ49AS3 106 aa12.09□□□□□ -0.47
AC006001.3-201ENST00000449307 OR6Q1Q8NGQ2 317 aa12.09□□□□□ -0.47
AC006001.3-201ENST00000449307 OR11L1Q8NGX0 322 aa12.09□□□□□ -0.47
AC006001.3-201ENST00000449307 COPZ2Q9P299 210 aa12.09□□□□□ -0.47
AC006001.3-201ENST00000449307 SAGE2PA6NJ88 616 aa12.08□□□□□ -0.48
AC006001.3-201ENST00000449307 KIAA0355O15063 1070 aa12.08□□□□□ -0.48
AC006001.3-201ENST00000449307 CYB5BO43169 146 aa12.08□□□□□ -0.48
AC006001.3-201ENST00000449307 PTHP01270 115 aa12.08□□□□□ -0.48
AC006001.3-201ENST00000449307 HOXA11P31270 313 aaPredicted RBP12.08□□□□□ -0.48
AC006001.3-201ENST00000449307 CTBSQ01459 385 aa12.08□□□□□ -0.48
AC006001.3-201ENST00000449307 AIMP2Q13155 320 aaKnown RBP12.08□□□□□ -0.48
AC006001.3-201ENST00000449307 OR8B8Q15620 311 aa12.08□□□□□ -0.48
AC006001.3-201ENST00000449307 PLCXD3Q63HM9 321 aa12.08□□□□□ -0.48
AC006001.3-201ENST00000449307 LCTLQ6UWM7 567 aa12.08□□□□□ -0.48
AC006001.3-201ENST00000449307 TMEM184AQ6ZMB5 413 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms