RNA–Protein interactions for RNA: ENST00000448872.6

RCL1-208, Transcript of RNA terminal phosphate cyclase like 1, humanhuman

TSL 1 (best) BASIC

Gene RCL1, Length 1,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1-208ENST00000448872 FBXO27Q8NI29 283 aa10.97□□□□□ -0.65
RCL1-208ENST00000448872 ZFP90Q8TF47 636 aa10.97□□□□□ -0.65
RCL1-208ENST00000448872 PIK3R3Q92569 461 aa10.97□□□□□ -0.65
RCL1-208ENST00000448872 SLC9A6Q92581 669 aa10.97□□□□□ -0.65
RCL1-208ENST00000448872 JADE3Q92613 823 aa10.97□□□□□ -0.65
RCL1-208ENST00000448872 CMTM5Q96DZ9 223 aa10.97□□□□□ -0.65
RCL1-208ENST00000448872 NEURL3Q96EH8 262 aa10.97□□□□□ -0.65
RCL1-208ENST00000448872 NXF5Q9H1B4 397 aaKnown RBP10.97□□□□□ -0.65
RCL1-208ENST00000448872 ZNF552Q9H707 407 aaPredicted RBP10.97□□□□□ -0.65
RCL1-208ENST00000448872 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.97□□□□□ -0.65
RCL1-208ENST00000448872 ANKRD10Q9NXR5 420 aa10.97□□□□□ -0.65
RCL1-208ENST00000448872 MYOTQ9UBF9 498 aa10.97□□□□□ -0.65
RCL1-208ENST00000448872 PRODH2Q9UF12 536 aa10.97□□□□□ -0.65
RCL1-208ENST00000448872 GPR55Q9Y2T6 319 aaPredicted RBP10.97□□□□□ -0.65
RCL1-208ENST00000448872 KCNE3Q9Y6H6 103 aa10.97□□□□□ -0.65
RCL1-208ENST00000448872 DSPP15924 2871 aaKnown RBP10.96□□□□□ -0.65
RCL1-208ENST00000448872 GXYLT2A0PJZ3 443 aa10.96□□□□□ -0.65
RCL1-208ENST00000448872 BBIP1A8MTZ0 92 aa10.96□□□□□ -0.65
RCL1-208ENST00000448872 ERN1O75460 977 aaKnown RBP10.96□□□□□ -0.65
RCL1-208ENST00000448872 ITGA10O75578 1167 aa10.96□□□□□ -0.65
RCL1-208ENST00000448872 CEACAM4O75871 244 aa10.96□□□□□ -0.65
RCL1-208ENST00000448872 NADKO95544 446 aaPredicted RBP10.96□□□□□ -0.65
RCL1-208ENST00000448872 PDGFAP04085 211 aa10.96□□□□□ -0.65
RCL1-208ENST00000448872 IFI6P09912 130 aa10.96□□□□□ -0.65
RCL1-208ENST00000448872 T-ENOLP0DO92 83 aa10.96□□□□□ -0.65
RCL1-208ENST00000448872 PRDX6P30041 224 aa10.96□□□□□ -0.65
RCL1-208ENST00000448872 GABRA3P34903 492 aa10.96□□□□□ -0.65
RCL1-208ENST00000448872 SOX11P35716 441 aa10.96□□□□□ -0.65
RCL1-208ENST00000448872 MAN2A2P49641 1150 aa10.96□□□□□ -0.65
RCL1-208ENST00000448872 MVDP53602 400 aa10.96□□□□□ -0.65
RCL1-208ENST00000448872 POLE2P56282 527 aa10.96□□□□□ -0.65
RCL1-208ENST00000448872 MLF1P58340 268 aa10.96□□□□□ -0.65
RCL1-208ENST00000448872 MTPNP58546 118 aa10.96□□□□□ -0.65
RCL1-208ENST00000448872 STX5Q13190 355 aa10.96□□□□□ -0.65
RCL1-208ENST00000448872 KRT72Q14CN4 511 aa10.96□□□□□ -0.65
RCL1-208ENST00000448872 LINC00303Q3SY05 128 aa10.96□□□□□ -0.65
RCL1-208ENST00000448872 COQ5Q5HYK3 327 aa10.96□□□□□ -0.65
RCL1-208ENST00000448872 ACER2Q5QJU3 275 aa10.96□□□□□ -0.65
RCL1-208ENST00000448872 EXOSC6Q5RKV6 272 aaKnown RBP10.96□□□□□ -0.65
RCL1-208ENST00000448872 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.96□□□□□ -0.65
RCL1-208ENST00000448872 ZNF468Q5VIY5 522 aaPredicted RBP10.96□□□□□ -0.65
RCL1-208ENST00000448872 HLA-DQA1Q5Y7H0 255 aa10.96□□□□□ -0.65
RCL1-208ENST00000448872 TNFAIP8L2Q6P589 184 aaPredicted RBP10.96□□□□□ -0.65
RCL1-208ENST00000448872 GALNT10Q86SR1 603 aa10.96□□□□□ -0.65
RCL1-208ENST00000448872 RPS19BP1Q86WX3 136 aaKnown RBP10.96□□□□□ -0.65
RCL1-208ENST00000448872 SLC44A2Q8IWA5 706 aaPredicted RBP10.96□□□□□ -0.65
RCL1-208ENST00000448872 BEST3Q8N1M1 668 aa10.96□□□□□ -0.65
RCL1-208ENST00000448872 HORMAD2Q8N7B1 307 aa10.96□□□□□ -0.65
RCL1-208ENST00000448872 TRIML2Q8N7C3 387 aa10.96□□□□□ -0.65
RCL1-208ENST00000448872 NUBPLQ8TB37 319 aa10.96□□□□□ -0.65
RCL1-208ENST00000448872 RAB8BQ92930 207 aa10.96□□□□□ -0.65
RCL1-208ENST00000448872 MOAP1Q96BY2 351 aa10.96□□□□□ -0.65
RCL1-208ENST00000448872 LRRC58Q96CX6 371 aa10.96□□□□□ -0.65
RCL1-208ENST00000448872 SLC35G5Q96KT7 338 aa10.96□□□□□ -0.65
RCL1-208ENST00000448872 BTBD9Q96Q07 612 aa10.96□□□□□ -0.65
RCL1-208ENST00000448872 CGREF1Q99674 301 aa10.96□□□□□ -0.65
RCL1-208ENST00000448872 LMF2Q9BU23 707 aaKnown RBP10.96□□□□□ -0.65
RCL1-208ENST00000448872 TPT1P8Q9HAU6 139 aa10.96□□□□□ -0.65
RCL1-208ENST00000448872 PLA2G3Q9NZ20 509 aa10.96□□□□□ -0.65
RCL1-208ENST00000448872 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.96□□□□□ -0.65
RCL1-208ENST00000448872 TAGLN3Q9UI15 199 aa10.96□□□□□ -0.65
RCL1-208ENST00000448872 CLIC1O00299 241 aa10.95□□□□□ -0.66
RCL1-208ENST00000448872 UBOX5O94941 541 aa10.95□□□□□ -0.66
RCL1-208ENST00000448872 ALPPP05187 535 aa10.95□□□□□ -0.66
RCL1-208ENST00000448872 FAM87AP0C7U9 286 aa10.95□□□□□ -0.66
RCL1-208ENST00000448872 DRD5P21918 477 aa10.95□□□□□ -0.66
RCL1-208ENST00000448872 MATN1P21941 496 aa10.95□□□□□ -0.66
RCL1-208ENST00000448872 MAP3K8P41279 467 aa10.95□□□□□ -0.66
RCL1-208ENST00000448872 PPICP45877 212 aa10.95□□□□□ -0.66
RCL1-208ENST00000448872 NUDT2P50583 147 aa10.95□□□□□ -0.66
RCL1-208ENST00000448872 TRMT5Q32P41 509 aaKnown RBP10.95□□□□□ -0.66
RCL1-208ENST00000448872 RUNDC3AQ59EK9 446 aa10.95□□□□□ -0.66
RCL1-208ENST00000448872 CRB2Q5IJ48 1285 aa10.95□□□□□ -0.66
RCL1-208ENST00000448872 AGAP7PQ5VUJ5 663 aa10.95□□□□□ -0.66
RCL1-208ENST00000448872 IRAK1BP1Q5VVH5 260 aa10.95□□□□□ -0.66
RCL1-208ENST00000448872 DESI1Q6ICB0 168 aa10.95□□□□□ -0.66
RCL1-208ENST00000448872 LYPD8Q6UX82 237 aa10.95□□□□□ -0.66
RCL1-208ENST00000448872 OLIG3Q7RTU3 272 aa10.95□□□□□ -0.66
RCL1-208ENST00000448872 GPR155Q7Z3F1 870 aa10.95□□□□□ -0.66
RCL1-208ENST00000448872 CDRT4Q8N9R6 151 aa10.95□□□□□ -0.66
RCL1-208ENST00000448872 OR5L2Q8NGL0 311 aa10.95□□□□□ -0.66
RCL1-208ENST00000448872 GPR151Q8TDV0 419 aa10.95□□□□□ -0.66
RCL1-208ENST00000448872 HOXB13Q92826 284 aaPredicted RBP10.95□□□□□ -0.66
RCL1-208ENST00000448872 CDS1Q92903 461 aa10.95□□□□□ -0.66
RCL1-208ENST00000448872 SLC35A4Q96G79 324 aa10.95□□□□□ -0.66
RCL1-208ENST00000448872 LCORQ96JN0 433 aaPredicted RBP10.95□□□□□ -0.66
RCL1-208ENST00000448872 AGAP4Q96P64 663 aa10.95□□□□□ -0.66
RCL1-208ENST00000448872 OR7D2Q96RA2 312 aa10.95□□□□□ -0.66
RCL1-208ENST00000448872 RASL10BQ96S79 203 aa10.95□□□□□ -0.66
RCL1-208ENST00000448872 CPPED1Q9BRF8 314 aaPredicted RBP10.95□□□□□ -0.66
RCL1-208ENST00000448872 ACTRT3Q9BYD9 372 aa10.95□□□□□ -0.66
RCL1-208ENST00000448872 OR51I1Q9H343 314 aa10.95□□□□□ -0.66
RCL1-208ENST00000448872 STMN3Q9NZ72 180 aa10.95□□□□□ -0.66
RCL1-208ENST00000448872 FAF1Q9UNN5 650 aaPredicted RBP10.95□□□□□ -0.66
RCL1-208ENST00000448872 CFL2Q9Y281 166 aa10.95□□□□□ -0.66
RCL1-208ENST00000448872 ANKRD11Q6UB99 2663 aaPredicted RBP10.95□□□□□ -0.66
RCL1-208ENST00000448872 ITPR1Q14643 2758 aa10.95□□□□□ -0.66
RCL1-208ENST00000448872 URB1O60287 2271 aaKnown RBP10.94□□□□□ -0.66
RCL1-208ENST00000448872 PRAMEF27A3QJZ7 478 aa10.94□□□□□ -0.66
RCL1-208ENST00000448872 FRG2CA6NGY1 282 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms