RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 NUP43Q8NFH3 380 aa12.93□□□□□ -0.34
GTF3C3-206ENST00000448539 OR5M3Q8NGP4 307 aa12.93□□□□□ -0.34
GTF3C3-206ENST00000448539 FAR1Q8WVX9 515 aa12.93□□□□□ -0.34
GTF3C3-206ENST00000448539 MIB2Q96AX9 1013 aa12.93□□□□□ -0.34
GTF3C3-206ENST00000448539 TESCQ96BS2 214 aa12.93□□□□□ -0.34
GTF3C3-206ENST00000448539 BTBD9Q96Q07 612 aa12.93□□□□□ -0.34
GTF3C3-206ENST00000448539 OR52B2Q96RD2 323 aa12.93□□□□□ -0.34
GTF3C3-206ENST00000448539 NEUROD4Q9HD90 331 aa12.93□□□□□ -0.34
GTF3C3-206ENST00000448539 TCF7L2Q9NQB0 619 aa12.93□□□□□ -0.34
GTF3C3-206ENST00000448539 SACM1LQ9NTJ5 587 aa12.93□□□□□ -0.34
GTF3C3-206ENST00000448539 GPR55Q9Y2T6 319 aaPredicted RBP12.93□□□□□ -0.34
GTF3C3-206ENST00000448539 OR10H1Q9Y4A9 318 aa12.93□□□□□ -0.34
GTF3C3-206ENST00000448539 UBR5O95071 2799 aaPredicted RBP12.92□□□□□ -0.34
GTF3C3-206ENST00000448539 TTC36A6NLP5 189 aa12.92□□□□□ -0.34
GTF3C3-206ENST00000448539 E9PBE3 544 aa12.92□□□□□ -0.34
GTF3C3-206ENST00000448539 EDF1O60869 148 aaKnown RBP12.92□□□□□ -0.34
GTF3C3-206ENST00000448539 FLNBO75369 2602 aaKnown RBP12.92□□□□□ -0.34
GTF3C3-206ENST00000448539 C6orf47O95873 294 aa12.92□□□□□ -0.34
GTF3C3-206ENST00000448539 ABCB1P08183 1280 aaPredicted RBP12.92□□□□□ -0.34
GTF3C3-206ENST00000448539 NAGAP17050 411 aa12.92□□□□□ -0.34
GTF3C3-206ENST00000448539 CNR1P21554 472 aa12.92□□□□□ -0.34
GTF3C3-206ENST00000448539 IDH3AP50213 366 aa12.92□□□□□ -0.34
GTF3C3-206ENST00000448539 MEOX1P50221 254 aa12.92□□□□□ -0.34
GTF3C3-206ENST00000448539 FBXW4P57775 412 aa12.92□□□□□ -0.34
GTF3C3-206ENST00000448539 GPR85P60893 370 aa12.92□□□□□ -0.34
GTF3C3-206ENST00000448539 STX1BP61266 288 aa12.92□□□□□ -0.34
GTF3C3-206ENST00000448539 UFM1P61960 85 aa12.92□□□□□ -0.34
GTF3C3-206ENST00000448539 FOXK1P85037 733 aa12.92□□□□□ -0.34
GTF3C3-206ENST00000448539 PMP22Q01453 160 aa12.92□□□□□ -0.34
GTF3C3-206ENST00000448539 ALDH6A1Q02252 535 aaKnown RBP12.92□□□□□ -0.34
GTF3C3-206ENST00000448539 NTRK2Q16620 822 aa12.92□□□□□ -0.34
GTF3C3-206ENST00000448539 VPS26BQ4G0F5 336 aa12.92□□□□□ -0.34
GTF3C3-206ENST00000448539 PDCD4Q53EL6 469 aaKnown RBP12.92□□□□□ -0.34
GTF3C3-206ENST00000448539 TMEM198Q66K66 360 aa12.92□□□□□ -0.34
GTF3C3-206ENST00000448539 OR4F3Q6IEY1 312 aa12.92□□□□□ -0.34
GTF3C3-206ENST00000448539 LYPD8Q6UX82 237 aa12.92□□□□□ -0.34
GTF3C3-206ENST00000448539 GK5Q6ZS86 529 aa12.92□□□□□ -0.34
GTF3C3-206ENST00000448539 SLC44A2Q8IWA5 706 aaPredicted RBP12.92□□□□□ -0.34
GTF3C3-206ENST00000448539 SLC34A3Q8N130 599 aa12.92□□□□□ -0.34
GTF3C3-206ENST00000448539 POGLUT1Q8NBL1 392 aa12.92□□□□□ -0.34
GTF3C3-206ENST00000448539 GALNT11Q8NCW6 608 aa12.92□□□□□ -0.34
GTF3C3-206ENST00000448539 OR10G3Q8NGC4 313 aa12.92□□□□□ -0.34
GTF3C3-206ENST00000448539 OR8J2Q8NGG1 315 aa12.92□□□□□ -0.34
GTF3C3-206ENST00000448539 NUDT8Q8WV74 236 aa12.92□□□□□ -0.34
GTF3C3-206ENST00000448539 OMA1Q96E52 524 aa12.92□□□□□ -0.34
GTF3C3-206ENST00000448539 MARK4Q96L34 752 aa12.92□□□□□ -0.34
GTF3C3-206ENST00000448539 VSTM2LQ96N03 204 aa12.92□□□□□ -0.34
GTF3C3-206ENST00000448539 MS4A4EQ96PG1 132 aa12.92□□□□□ -0.34
GTF3C3-206ENST00000448539 TAAR6Q96RI8 345 aa12.92□□□□□ -0.34
GTF3C3-206ENST00000448539 CCDC28BQ9BUN5 200 aa12.92□□□□□ -0.34
GTF3C3-206ENST00000448539 Q9N2J8 555 aa12.92□□□□□ -0.34
GTF3C3-206ENST00000448539 EQTNQ9NQ60 294 aa12.92□□□□□ -0.34
GTF3C3-206ENST00000448539 ZCCHC3Q9NUD5 404 aaKnown RBP12.92□□□□□ -0.34
GTF3C3-206ENST00000448539 CNIH4Q9P003 139 aa12.92□□□□□ -0.34
GTF3C3-206ENST00000448539 NTNG1Q9Y2I2 539 aa12.92□□□□□ -0.34
GTF3C3-206ENST00000448539 GPR45Q9Y5Y3 372 aa12.92□□□□□ -0.34
GTF3C3-206ENST00000448539 ASPDHA6ND91 283 aa12.91□□□□□ -0.34
GTF3C3-206ENST00000448539 RNASET2O00584 256 aaKnown RBP12.91□□□□□ -0.34
GTF3C3-206ENST00000448539 ANKRD28O15084 1053 aa12.91□□□□□ -0.34
GTF3C3-206ENST00000448539 TO15178 435 aa12.91□□□□□ -0.34
GTF3C3-206ENST00000448539 NME6O75414 186 aaPredicted RBP12.91□□□□□ -0.34
GTF3C3-206ENST00000448539 REM1O75628 298 aa12.91□□□□□ -0.34
GTF3C3-206ENST00000448539 PPM1BO75688 479 aa12.91□□□□□ -0.34
GTF3C3-206ENST00000448539 SLC22A3O75751 556 aa12.91□□□□□ -0.34
GTF3C3-206ENST00000448539 VIMP08670 466 aaKnown RBP12.91□□□□□ -0.34
GTF3C3-206ENST00000448539 CT45A8P0DMV1 189 aa12.91□□□□□ -0.34
GTF3C3-206ENST00000448539 CT45A9P0DMV2 189 aa12.91□□□□□ -0.34
GTF3C3-206ENST00000448539 CCL3P10147 92 aa12.91□□□□□ -0.34
GTF3C3-206ENST00000448539 TROVE2P10155 538 aaKnown RBP eCLIP12.91□□□□□ -0.34
GTF3C3-206ENST00000448539 IL12BP29460 328 aa12.91□□□□□ -0.34
GTF3C3-206ENST00000448539 SOAT1P35610 550 aa12.91□□□□□ -0.34
GTF3C3-206ENST00000448539 CORO7P57737 925 aa12.91□□□□□ -0.34
GTF3C3-206ENST00000448539 PLGLB1Q02325 96 aa12.91□□□□□ -0.34
GTF3C3-206ENST00000448539 ELOAQ14241 798 aaKnown RBP12.91□□□□□ -0.34
GTF3C3-206ENST00000448539 FAM174BQ3ZCQ3 159 aa12.91□□□□□ -0.34
GTF3C3-206ENST00000448539 CT45A2Q5DJT8 189 aa12.91□□□□□ -0.34
GTF3C3-206ENST00000448539 SPANXN4Q5MJ08 99 aa12.91□□□□□ -0.34
GTF3C3-206ENST00000448539 BHLHB9Q6PI77 547 aa12.91□□□□□ -0.34
GTF3C3-206ENST00000448539 MIER2Q8N344 545 aa12.91□□□□□ -0.34
GTF3C3-206ENST00000448539 FBXW8Q8N3Y1 598 aa12.91□□□□□ -0.34
GTF3C3-206ENST00000448539 GLB1L3Q8NCI6 653 aaPredicted RBP12.91□□□□□ -0.34
GTF3C3-206ENST00000448539 OR4A15Q8NGL6 344 aa12.91□□□□□ -0.34
GTF3C3-206ENST00000448539 PAQR8Q8TEZ7 354 aa12.91□□□□□ -0.34
GTF3C3-206ENST00000448539 NR4A3Q92570 626 aa12.91□□□□□ -0.34
GTF3C3-206ENST00000448539 DIO2Q92813 273 aa12.91□□□□□ -0.34
GTF3C3-206ENST00000448539 TMBIM1Q969X1 311 aa12.91□□□□□ -0.34
GTF3C3-206ENST00000448539 MOAP1Q96BY2 351 aa12.91□□□□□ -0.34
GTF3C3-206ENST00000448539 THOC1Q96FV9 657 aaKnown RBP12.91□□□□□ -0.34
GTF3C3-206ENST00000448539 FAM173AQ9BQD7 235 aa12.91□□□□□ -0.34
GTF3C3-206ENST00000448539 SIKE1Q9BRV8 207 aa12.91□□□□□ -0.34
GTF3C3-206ENST00000448539 NPHS2Q9NP85 383 aa12.91□□□□□ -0.34
GTF3C3-206ENST00000448539 MRTO4Q9UKD2 239 aaKnown RBP12.91□□□□□ -0.34
GTF3C3-206ENST00000448539 PRSS51A0A1B0GVH4 220 aa12.9□□□□□ -0.34
GTF3C3-206ENST00000448539 G3V3Y1 287 aa12.9□□□□□ -0.34
GTF3C3-206ENST00000448539 PSMG1O95456 288 aa12.9□□□□□ -0.34
GTF3C3-206ENST00000448539 CPSF4O95639 269 aaKnown RBP12.9□□□□□ -0.34
GTF3C3-206ENST00000448539 ZNF24P17028 368 aa12.9□□□□□ -0.34
GTF3C3-206ENST00000448539 CCT3P49368 545 aaKnown RBP12.9□□□□□ -0.34
GTF3C3-206ENST00000448539 PRIM2P49643 509 aa12.9□□□□□ -0.34
GTF3C3-206ENST00000448539 KCNJ2P63252 427 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms