RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 HSD17B2P37059 387 aa13.9□□□□□ -0.18
SF1-211ENST00000448404 PXNP49023 591 aaPredicted RBP13.9□□□□□ -0.18
SF1-211ENST00000448404 TPMTP51580 245 aa13.9□□□□□ -0.18
SF1-211ENST00000448404 SLC13A2Q13183 592 aa13.9□□□□□ -0.18
SF1-211ENST00000448404 RUNX2Q13950 521 aa13.9□□□□□ -0.18
SF1-211ENST00000448404 UBE2UQ5VVX9 321 aa13.9□□□□□ -0.18
SF1-211ENST00000448404 MLIPQ5VWP3 458 aa13.9□□□□□ -0.18
SF1-211ENST00000448404 NUDT18Q6ZVK8 323 aa13.9□□□□□ -0.18
SF1-211ENST00000448404 SLC34A3Q8N130 599 aa13.9□□□□□ -0.18
SF1-211ENST00000448404 MFSD4AQ8N468 514 aa13.9□□□□□ -0.18
SF1-211ENST00000448404 EXOSC4Q9NPD3 245 aaKnown RBP13.9□□□□□ -0.18
SF1-211ENST00000448404 AKIP1Q9NQ31 210 aa13.9□□□□□ -0.18
SF1-211ENST00000448404 DZANK1Q9NVP4 752 aa13.9□□□□□ -0.18
SF1-211ENST00000448404 NDRG2Q9UN36 371 aaKnown RBP13.9□□□□□ -0.18
SF1-211ENST00000448404 ENTPD4Q9Y227 616 aa13.9□□□□□ -0.18
SF1-211ENST00000448404 DNMT3AQ9Y6K1 912 aaPredicted RBP13.9□□□□□ -0.18
SF1-211ENST00000448404 AP1M2Q9Y6Q5 423 aa13.9□□□□□ -0.18
SF1-211ENST00000448404 DSCR3O14972 297 aa13.9□□□□□ -0.18
SF1-211ENST00000448404 DPM1O60762 260 aa13.9□□□□□ -0.18
SF1-211ENST00000448404 EIF2DP41214 584 aaKnown RBP13.9□□□□□ -0.18
SF1-211ENST00000448404 MRM1Q6IN84 353 aaKnown RBP13.9□□□□□ -0.18
SF1-211ENST00000448404 SLC48A1Q6P1K1 146 aa13.9□□□□□ -0.18
SF1-211ENST00000448404 OR13H1Q8NG92 308 aa13.9□□□□□ -0.18
SF1-211ENST00000448404 MCFD2Q8NI22 146 aa13.9□□□□□ -0.18
SF1-211ENST00000448404 IPCEF1Q8WWN9 437 aaPredicted RBP13.9□□□□□ -0.18
SF1-211ENST00000448404 KLHL6Q8WZ60 621 aa13.9□□□□□ -0.18
SF1-211ENST00000448404 CDS1Q92903 461 aa13.9□□□□□ -0.18
SF1-211ENST00000448404 ZNF607Q96SK3 696 aa13.9□□□□□ -0.18
SF1-211ENST00000448404 YARS2Q9Y2Z4 477 aaKnown RBP13.9□□□□□ -0.18
SF1-211ENST00000448404 IFT52Q9Y366 437 aa13.9□□□□□ -0.18
SF1-211ENST00000448404 ALPK2Q86TB3 2170 aa13.9□□□□□ -0.19
SF1-211ENST00000448404 SLC22A1O15245 554 aa13.89□□□□□ -0.19
SF1-211ENST00000448404 PIP5K1CO60331 668 aa13.89□□□□□ -0.19
SF1-211ENST00000448404 GTF2E2P29084 291 aaKnown RBP13.89□□□□□ -0.19
SF1-211ENST00000448404 CMPK1P30085 196 aa13.89□□□□□ -0.19
SF1-211ENST00000448404 LTBRP36941 435 aa13.89□□□□□ -0.19
SF1-211ENST00000448404 MAN2A2P49641 1150 aa13.89□□□□□ -0.19
SF1-211ENST00000448404 KCNJ8Q15842 424 aa13.89□□□□□ -0.19
SF1-211ENST00000448404 ALG11Q2TAA5 492 aa13.89□□□□□ -0.19
SF1-211ENST00000448404 ZNF425Q6IV72 752 aa13.89□□□□□ -0.19
SF1-211ENST00000448404 KIF18BQ86Y91 864 aa13.89□□□□□ -0.19
SF1-211ENST00000448404 NKAIN4Q8IVV8 208 aa13.89□□□□□ -0.19
SF1-211ENST00000448404 ZFPM2Q8WW38 1151 aa13.89□□□□□ -0.19
SF1-211ENST00000448404 ELP4Q96EB1 424 aa13.89□□□□□ -0.19
SF1-211ENST00000448404 KCNS3Q9BQ31 491 aa13.89□□□□□ -0.19
SF1-211ENST00000448404 FAIM2Q9BWQ8 316 aa13.89□□□□□ -0.19
SF1-211ENST00000448404 SLC38A1Q9H2H9 487 aa13.89□□□□□ -0.19
SF1-211ENST00000448404 TPK1Q9H3S4 243 aa13.89□□□□□ -0.19
SF1-211ENST00000448404 CCNB1IP1Q9NPC3 277 aa13.89□□□□□ -0.19
SF1-211ENST00000448404 ABCB10Q9NRK6 738 aa13.89□□□□□ -0.19
SF1-211ENST00000448404 ACSS1Q9NUB1 689 aaPredicted RBP13.89□□□□□ -0.19
SF1-211ENST00000448404 ASXL3Q9C0F0 2248 aa13.89□□□□□ -0.19
SF1-211ENST00000448404 FANCMQ8IYD8 2048 aa13.89□□□□□ -0.19
SF1-211ENST00000448404 OSMP13725 252 aa13.89□□□□□ -0.19
SF1-211ENST00000448404 HOXB6P17509 224 aaKnown RBP13.89□□□□□ -0.19
SF1-211ENST00000448404 CD79BP40259 229 aa13.89□□□□□ -0.19
SF1-211ENST00000448404 SERPINB10P48595 397 aa13.89□□□□□ -0.19
SF1-211ENST00000448404 RGS6P49758 472 aa13.89□□□□□ -0.19
SF1-211ENST00000448404 ALDH6A1Q02252 535 aaKnown RBP13.89□□□□□ -0.19
SF1-211ENST00000448404 SSX1Q16384 188 aa13.89□□□□□ -0.19
SF1-211ENST00000448404 ZNF311Q5JNZ3 666 aa13.89□□□□□ -0.19
SF1-211ENST00000448404 FAM92BQ6ZTR7 304 aa13.89□□□□□ -0.19
SF1-211ENST00000448404 PRICKLE2Q7Z3G6 844 aa13.89□□□□□ -0.19
SF1-211ENST00000448404 NRROSQ86YC3 692 aa13.89□□□□□ -0.19
SF1-211ENST00000448404 CADM3Q8N126 398 aa13.89□□□□□ -0.19
SF1-211ENST00000448404 CYP4Z2PQ8N1L4 340 aa13.89□□□□□ -0.19
SF1-211ENST00000448404 ZFP41Q8N8Y5 198 aa13.89□□□□□ -0.19
SF1-211ENST00000448404 TRUB1Q8WWH5 349 aaKnown RBP13.89□□□□□ -0.19
SF1-211ENST00000448404 MYDGFQ969H8 173 aa13.89□□□□□ -0.19
SF1-211ENST00000448404 SLC35A4Q96G79 324 aa13.89□□□□□ -0.19
SF1-211ENST00000448404 FAM46AQ96IP4 442 aaKnown RBP13.89□□□□□ -0.19
SF1-211ENST00000448404 ZNF681Q96N22 645 aa13.89□□□□□ -0.19
SF1-211ENST00000448404 SIAEQ9HAT2 523 aa13.89□□□□□ -0.19
SF1-211ENST00000448404 ADAP2Q9NPF8 381 aa13.89□□□□□ -0.19
SF1-211ENST00000448404 SEMA4GQ9NTN9 838 aa13.89□□□□□ -0.19
SF1-211ENST00000448404 A0A087WUU8 490 aa13.88□□□□□ -0.19
SF1-211ENST00000448404 CDC123O75794 336 aaPredicted RBP13.88□□□□□ -0.19
SF1-211ENST00000448404 GKN3PP0CG01 181 aa13.88□□□□□ -0.19
SF1-211ENST00000448404 CSNK2A2P19784 350 aaPredicted RBP13.88□□□□□ -0.19
SF1-211ENST00000448404 SOX18P35713 384 aa13.88□□□□□ -0.19
SF1-211ENST00000448404 GPR4P46093 362 aa13.88□□□□□ -0.19
SF1-211ENST00000448404 UGT2B15P54855 530 aa13.88□□□□□ -0.19
SF1-211ENST00000448404 GINS1Q14691 196 aa13.88□□□□□ -0.19
SF1-211ENST00000448404 Q6ZSR6 202 aa13.88□□□□□ -0.19
SF1-211ENST00000448404 MTSS1LQ765P7 747 aa13.88□□□□□ -0.19
SF1-211ENST00000448404 SLC46A3Q7Z3Q1 461 aa13.88□□□□□ -0.19
SF1-211ENST00000448404 SLC22A18ASQ8N1D0 253 aa13.88□□□□□ -0.19
SF1-211ENST00000448404 FAM83FQ8NEG4 500 aaPredicted RBP13.88□□□□□ -0.19
SF1-211ENST00000448404 OR6Q1Q8NGQ2 317 aa13.88□□□□□ -0.19
SF1-211ENST00000448404 PIK3R3Q92569 461 aa13.88□□□□□ -0.19
SF1-211ENST00000448404 POP5Q969H6 163 aaKnown RBP13.88□□□□□ -0.19
SF1-211ENST00000448404 MGLLQ99685 303 aa13.88□□□□□ -0.19
SF1-211ENST00000448404 GABRG3Q99928 467 aa13.88□□□□□ -0.19
SF1-211ENST00000448404 FKBP14Q9NWM8 211 aa13.88□□□□□ -0.19
SF1-211ENST00000448404 CABIN1Q9Y6J0 2220 aa13.88□□□□□ -0.19
SF1-211ENST00000448404 LRRC72A6NJI9 287 aa13.88□□□□□ -0.19
SF1-211ENST00000448404 ARHGAP33O14559 1287 aa13.88□□□□□ -0.19
SF1-211ENST00000448404 PRG2P13727 222 aa13.88□□□□□ -0.19
SF1-211ENST00000448404 UGT2B7P16662 529 aa13.88□□□□□ -0.19
SF1-211ENST00000448404 PPP2R1BP30154 601 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms