RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 MAP10Q9P2G4 905 aa15.97■□□□□ 0.15
LIME1-202ENST00000444951 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.97■□□□□ 0.15
LIME1-202ENST00000444951 TAGLN3Q9UI15 199 aa15.97■□□□□ 0.15
LIME1-202ENST00000444951 ZNF639Q9UID6 485 aa15.97■□□□□ 0.15
LIME1-202ENST00000444951 ZNF223Q9UK11 482 aaPredicted RBP15.97■□□□□ 0.15
LIME1-202ENST00000444951 C19orf53Q9UNZ5 99 aaPredicted RBP15.97■□□□□ 0.15
LIME1-202ENST00000444951 RP1L1Q8IWN7 2480 aaPredicted RBP15.96■□□□□ 0.15
LIME1-202ENST00000444951 SHANK1Q9Y566 2161 aa15.96■□□□□ 0.15
LIME1-202ENST00000444951 A0A087WV62 115 aa15.96■□□□□ 0.15
LIME1-202ENST00000444951 A0A096LPI6 279 aa15.96■□□□□ 0.15
LIME1-202ENST00000444951 CCT8L1PA6NM43 557 aa15.96■□□□□ 0.15
LIME1-202ENST00000444951 PRAMEF2O60811 474 aa15.96■□□□□ 0.15
LIME1-202ENST00000444951 COQ9O75208 318 aa15.96■□□□□ 0.15
LIME1-202ENST00000444951 SLITRK5O94991 958 aa15.96■□□□□ 0.15
LIME1-202ENST00000444951 ICAM2P13598 275 aa15.96■□□□□ 0.15
LIME1-202ENST00000444951 PRDX6P30041 224 aa15.96■□□□□ 0.15
LIME1-202ENST00000444951 CD97P48960 835 aa15.96■□□□□ 0.15
LIME1-202ENST00000444951 GPR143P51810 404 aa15.96■□□□□ 0.15
LIME1-202ENST00000444951 SLC37A1P57057 533 aa15.96■□□□□ 0.15
LIME1-202ENST00000444951 RPS26P62854 115 aaKnown RBP15.96■□□□□ 0.15
LIME1-202ENST00000444951 AIMP2Q13155 320 aaKnown RBP15.96■□□□□ 0.15
LIME1-202ENST00000444951 NNATQ16517 81 aa15.96■□□□□ 0.15
LIME1-202ENST00000444951 FCRLBQ6BAA4 426 aa15.96■□□□□ 0.15
LIME1-202ENST00000444951 SLC29A4Q7RTT9 530 aa15.96■□□□□ 0.15
LIME1-202ENST00000444951 C6orf120Q7Z4R8 191 aa15.96■□□□□ 0.15
LIME1-202ENST00000444951 C9orf40Q8IXQ3 194 aa15.96■□□□□ 0.15
LIME1-202ENST00000444951 SIRT6Q8N6T7 355 aa15.96■□□□□ 0.15
LIME1-202ENST00000444951 ZNF615Q8N8J6 731 aa15.96■□□□□ 0.15
LIME1-202ENST00000444951 PCYOX1LQ8NBM8 494 aa15.96■□□□□ 0.15
LIME1-202ENST00000444951 OR56A1Q8NGH5 318 aa15.96■□□□□ 0.15
LIME1-202ENST00000444951 GOT1L1Q8NHS2 421 aaPredicted RBP15.96■□□□□ 0.15
LIME1-202ENST00000444951 C16orf52Q8NHV5 167 aa15.96■□□□□ 0.15
LIME1-202ENST00000444951 PSMA8Q8TAA3 256 aa15.96■□□□□ 0.15
LIME1-202ENST00000444951 SFXN5Q8TD22 340 aa15.96■□□□□ 0.15
LIME1-202ENST00000444951 JADE3Q92613 823 aa15.96■□□□□ 0.15
LIME1-202ENST00000444951 C16orf58Q96GQ5 468 aa15.96■□□□□ 0.15
LIME1-202ENST00000444951 ING2Q9H160 280 aa15.96■□□□□ 0.15
LIME1-202ENST00000444951 MMP25Q9NPA2 562 aa15.96■□□□□ 0.15
LIME1-202ENST00000444951 DTX4Q9Y2E6 619 aa15.96■□□□□ 0.15
LIME1-202ENST00000444951 PCDHB14Q9Y5E9 798 aa15.96■□□□□ 0.15
LIME1-202ENST00000444951 ERN1O75460 977 aaKnown RBP15.95■□□□□ 0.14
LIME1-202ENST00000444951 BCAS2O75934 225 aaPredicted RBP15.95■□□□□ 0.14
LIME1-202ENST00000444951 UBOX5O94941 541 aa15.95■□□□□ 0.14
LIME1-202ENST00000444951 SERPINA7P05543 415 aa15.95■□□□□ 0.14
LIME1-202ENST00000444951 ESRRAP11474 423 aaPredicted RBP15.95■□□□□ 0.14
LIME1-202ENST00000444951 UQCRFS1P47985 274 aa15.95■□□□□ 0.14
LIME1-202ENST00000444951 EMDP50402 254 aa15.95■□□□□ 0.14
LIME1-202ENST00000444951 ST13P50502 369 aaKnown RBP15.95■□□□□ 0.14
LIME1-202ENST00000444951 NUDT2P50583 147 aa15.95■□□□□ 0.14
LIME1-202ENST00000444951 CCL11P51671 97 aa15.95■□□□□ 0.14
LIME1-202ENST00000444951 RNF4P78317 190 aa15.95■□□□□ 0.14
LIME1-202ENST00000444951 MXRA7P84157 204 aa15.95■□□□□ 0.14
LIME1-202ENST00000444951 ART3Q13508 389 aa15.95■□□□□ 0.14
LIME1-202ENST00000444951 LASP1Q14847 261 aaKnown RBP15.95■□□□□ 0.14
LIME1-202ENST00000444951 KRT72Q14CN4 511 aa15.95■□□□□ 0.14
LIME1-202ENST00000444951 NADK2Q4G0N4 442 aa15.95■□□□□ 0.14
LIME1-202ENST00000444951 IRAK1BP1Q5VVH5 260 aa15.95■□□□□ 0.14
LIME1-202ENST00000444951 HLA-DQA1Q5Y7H0 255 aa15.95■□□□□ 0.14
LIME1-202ENST00000444951 FAM91A1Q658Y4 838 aa15.95■□□□□ 0.14
LIME1-202ENST00000444951 TMEM64Q6YI46 380 aa15.95■□□□□ 0.14
LIME1-202ENST00000444951 C16orf47Q6ZP98 133 aaPredicted RBP15.95■□□□□ 0.14
LIME1-202ENST00000444951 DPP10Q8N608 796 aa15.95■□□□□ 0.14
LIME1-202ENST00000444951 TMEM102Q8N9M5 508 aaPredicted RBP15.95■□□□□ 0.14
LIME1-202ENST00000444951 BRIX1Q8TDN6 353 aaKnown RBP15.95■□□□□ 0.14
LIME1-202ENST00000444951 ELP5Q8TE02 316 aa15.95■□□□□ 0.14
LIME1-202ENST00000444951 MOAP1Q96BY2 351 aa15.95■□□□□ 0.14
LIME1-202ENST00000444951 NSL1Q96IY1 281 aa15.95■□□□□ 0.14
LIME1-202ENST00000444951 SLC35G5Q96KT7 338 aa15.95■□□□□ 0.14
LIME1-202ENST00000444951 MS4A4EQ96PG1 132 aa15.95■□□□□ 0.14
LIME1-202ENST00000444951 SLC39A3Q9BRY0 314 aa15.95■□□□□ 0.14
LIME1-202ENST00000444951 ITPAQ9BY32 194 aa15.95■□□□□ 0.14
LIME1-202ENST00000444951 TRIM8Q9BZR9 551 aa15.95■□□□□ 0.14
LIME1-202ENST00000444951 EFCAB1Q9HAE3 211 aa15.95■□□□□ 0.14
LIME1-202ENST00000444951 FOLH1BQ9HBA9 442 aa15.95■□□□□ 0.14
LIME1-202ENST00000444951 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.95■□□□□ 0.14
LIME1-202ENST00000444951 PPIEQ9UNP9 301 aaKnown RBP15.95■□□□□ 0.14
LIME1-202ENST00000444951 ICE1Q9Y2F5 2266 aa15.94■□□□□ 0.14
LIME1-202ENST00000444951 SPTBN1Q01082 2364 aaKnown RBP15.94■□□□□ 0.14
LIME1-202ENST00000444951 PRRC2CQ9Y520 2896 aaKnown RBP15.94■□□□□ 0.14
LIME1-202ENST00000444951 C2orf92A0A1B0GVN3 265 aa15.94■□□□□ 0.14
LIME1-202ENST00000444951 ZFAND5O76080 213 aa15.94■□□□□ 0.14
LIME1-202ENST00000444951 HMGN2P05204 90 aaKnown RBP15.94■□□□□ 0.14
LIME1-202ENST00000444951 PTPN6P29350 595 aa15.94■□□□□ 0.14
LIME1-202ENST00000444951 TRMT5Q32P41 509 aaKnown RBP15.94■□□□□ 0.14
LIME1-202ENST00000444951 LRIF1Q5T3J3 769 aa15.94■□□□□ 0.14
LIME1-202ENST00000444951 DLEU7Q6UYE1 221 aa15.94■□□□□ 0.14
LIME1-202ENST00000444951 MSRB3Q8IXL7 192 aa15.94■□□□□ 0.14
LIME1-202ENST00000444951 SLC9A6Q92581 669 aa15.94■□□□□ 0.14
LIME1-202ENST00000444951 WWTR1Q9GZV5 400 aa15.94■□□□□ 0.14
LIME1-202ENST00000444951 GID8Q9NWU2 228 aa15.94■□□□□ 0.14
LIME1-202ENST00000444951 SLC25A37Q9NYZ2 338 aa15.94■□□□□ 0.14
LIME1-202ENST00000444951 VAPAQ9P0L0 249 aa15.94■□□□□ 0.14
LIME1-202ENST00000444951 PRODH2Q9UF12 536 aa15.94■□□□□ 0.14
LIME1-202ENST00000444951 FAF1Q9UNN5 650 aaPredicted RBP15.94■□□□□ 0.14
LIME1-202ENST00000444951 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.93■□□□□ 0.14
LIME1-202ENST00000444951 OR6C76A6NM76 312 aa15.93■□□□□ 0.14
LIME1-202ENST00000444951 WWP2O00308 870 aa15.93■□□□□ 0.14
LIME1-202ENST00000444951 ZCCHC18P0CG32 403 aa15.93■□□□□ 0.14
LIME1-202ENST00000444951 CORO7P57737 925 aa15.93■□□□□ 0.14
LIME1-202ENST00000444951 EBPQ15125 230 aaKnown RBP15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms