RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 RAB40CQ96S21 281 aa3.61□□□□□ -1.83
HMGB3P6-201ENST00000444896 BPIFA3Q9BQP9 254 aa3.61□□□□□ -1.83
HMGB3P6-201ENST00000444896 LY9Q9HBG7 655 aa3.61□□□□□ -1.83
HMGB3P6-201ENST00000444896 MID1IP1Q9NPA3 183 aa3.61□□□□□ -1.83
HMGB3P6-201ENST00000444896 DEPPQ9NTK1 212 aa3.61□□□□□ -1.83
HMGB3P6-201ENST00000444896 RBM28Q9NW13 759 aaKnown RBP3.61□□□□□ -1.83
HMGB3P6-201ENST00000444896 GTSE1Q9NYZ3 720 aa3.61□□□□□ -1.83
HMGB3P6-201ENST00000444896 TECRQ9NZ01 308 aaKnown RBP3.61□□□□□ -1.83
HMGB3P6-201ENST00000444896 RAI14Q9P0K7 980 aa3.61□□□□□ -1.83
HMGB3P6-201ENST00000444896 EXOC7Q9UPT5 735 aa3.61□□□□□ -1.83
HMGB3P6-201ENST00000444896 A0A1B0GUL6 1792 aa3.61□□□□□ -1.83
HMGB3P6-201ENST00000444896 BCL9LQ86UU0 1499 aa3.6□□□□□ -1.83
HMGB3P6-201ENST00000444896 MYO5AQ9Y4I1 1855 aaKnown RBP3.6□□□□□ -1.83
HMGB3P6-201ENST00000444896 MYH13Q9UKX3 1938 aa3.6□□□□□ -1.83
HMGB3P6-201ENST00000444896 LTBP4Q8N2S1 1624 aa3.6□□□□□ -1.83
HMGB3P6-201ENST00000444896 NHSQ6T4R5 1651 aa3.6□□□□□ -1.83
HMGB3P6-201ENST00000444896 A0A1B0GVL5 298 aa3.6□□□□□ -1.83
HMGB3P6-201ENST00000444896 KIF2AO00139 706 aaPredicted RBP3.6□□□□□ -1.83
HMGB3P6-201ENST00000444896 PDHXO00330 501 aa3.6□□□□□ -1.83
HMGB3P6-201ENST00000444896 TOM1O60784 492 aa3.6□□□□□ -1.83
HMGB3P6-201ENST00000444896 SEMA4FO95754 770 aa3.6□□□□□ -1.83
HMGB3P6-201ENST00000444896 TXNDC12O95881 172 aa3.6□□□□□ -1.83
HMGB3P6-201ENST00000444896 GAS8O95995 478 aa3.6□□□□□ -1.83
HMGB3P6-201ENST00000444896 HPRP00739 348 aa3.6□□□□□ -1.83
HMGB3P6-201ENST00000444896 HOXD4P09016 255 aaPredicted RBP3.6□□□□□ -1.83
HMGB3P6-201ENST00000444896 GSTA2P09210 222 aa3.6□□□□□ -1.83
HMGB3P6-201ENST00000444896 CALM1P0DP23 149 aa3.6□□□□□ -1.83
HMGB3P6-201ENST00000444896 CALM2P0DP24 149 aa3.6□□□□□ -1.83
HMGB3P6-201ENST00000444896 CALM3P0DP25 149 aa3.6□□□□□ -1.83
HMGB3P6-201ENST00000444896 CMA1P23946 247 aa3.6□□□□□ -1.83
HMGB3P6-201ENST00000444896 NDUFA8P51970 172 aa3.6□□□□□ -1.83
HMGB3P6-201ENST00000444896 PEX3P56589 373 aa3.6□□□□□ -1.83
HMGB3P6-201ENST00000444896 RPL27P61353 136 aaKnown RBP3.6□□□□□ -1.83
HMGB3P6-201ENST00000444896 LMO4P61968 165 aa3.6□□□□□ -1.83
HMGB3P6-201ENST00000444896 SLC17A1Q14916 467 aa3.6□□□□□ -1.83
HMGB3P6-201ENST00000444896 HEPACAMQ14CZ8 416 aa3.6□□□□□ -1.83
HMGB3P6-201ENST00000444896 ODF2Q5BJF6 829 aa3.6□□□□□ -1.83
HMGB3P6-201ENST00000444896 C9orf66Q5T8R8 295 aa3.6□□□□□ -1.83
HMGB3P6-201ENST00000444896 ZNF730Q6ZMV8 503 aa3.6□□□□□ -1.83
HMGB3P6-201ENST00000444896 CARNMT1Q8N4J0 409 aa3.6□□□□□ -1.83
HMGB3P6-201ENST00000444896 C4orf32Q8N8J7 132 aa3.6□□□□□ -1.83
HMGB3P6-201ENST00000444896 OR1B1Q8NGR6 318 aa3.6□□□□□ -1.83
HMGB3P6-201ENST00000444896 OR4L1Q8NH43 312 aa3.6□□□□□ -1.83
HMGB3P6-201ENST00000444896 KIAA1524Q8TCG1 905 aa3.6□□□□□ -1.83
HMGB3P6-201ENST00000444896 PCNPQ8WW12 178 aaKnown RBP3.6□□□□□ -1.83
HMGB3P6-201ENST00000444896 MRPL53Q96EL3 112 aaKnown RBP3.6□□□□□ -1.83
HMGB3P6-201ENST00000444896 CRNKL1Q9BZJ0 848 aaKnown RBP3.6□□□□□ -1.83
HMGB3P6-201ENST00000444896 STRADBQ9C0K7 418 aa3.6□□□□□ -1.83
HMGB3P6-201ENST00000444896 WWP1Q9H0M0 922 aa3.6□□□□□ -1.83
HMGB3P6-201ENST00000444896 ADNPQ9H2P0 1102 aa3.6□□□□□ -1.83
HMGB3P6-201ENST00000444896 DPEP3Q9H4B8 488 aa3.6□□□□□ -1.83
HMGB3P6-201ENST00000444896 MOB1AQ9H8S9 216 aa3.6□□□□□ -1.83
HMGB3P6-201ENST00000444896 NMUR1Q9HB89 426 aa3.6□□□□□ -1.83
HMGB3P6-201ENST00000444896 DDX28Q9NUL7 540 aaKnown RBP3.6□□□□□ -1.83
HMGB3P6-201ENST00000444896 ZNF346Q9UL40 294 aaKnown RBP3.6□□□□□ -1.83
HMGB3P6-201ENST00000444896 CSAG2Q9Y5P2 127 aa3.6□□□□□ -1.83
HMGB3P6-201ENST00000444896 STYXL1Q9Y6J8 313 aa3.6□□□□□ -1.83
HMGB3P6-201ENST00000444896 COL24A1Q17RW2 1714 aa3.6□□□□□ -1.83
HMGB3P6-201ENST00000444896 LAMB1P07942 1786 aa3.6□□□□□ -1.83
HMGB3P6-201ENST00000444896 FER1L5A0AVI2 2057 aa3.59□□□□□ -1.83
HMGB3P6-201ENST00000444896 CASZ1Q86V15 1759 aa3.59□□□□□ -1.83
HMGB3P6-201ENST00000444896 ACOD1A6NK06 481 aa3.59□□□□□ -1.83
HMGB3P6-201ENST00000444896 RPL37AP8A6NKH3 93 aa3.59□□□□□ -1.83
HMGB3P6-201ENST00000444896 NEDD8-MDP1E9PL57 170 aa3.59□□□□□ -1.83
HMGB3P6-201ENST00000444896 TXNL1O43396 289 aa3.59□□□□□ -1.83
HMGB3P6-201ENST00000444896 RANBP6O60518 1105 aaKnown RBP3.59□□□□□ -1.83
HMGB3P6-201ENST00000444896 SMC2O95347 1197 aa3.59□□□□□ -1.83
HMGB3P6-201ENST00000444896 MMP1P03956 469 aa3.59□□□□□ -1.83
HMGB3P6-201ENST00000444896 CT45A8P0DMV1 189 aa3.59□□□□□ -1.83
HMGB3P6-201ENST00000444896 CT45A9P0DMV2 189 aa3.59□□□□□ -1.83
HMGB3P6-201ENST00000444896 IL4RP24394 825 aa3.59□□□□□ -1.83
HMGB3P6-201ENST00000444896 LMO2P25791 158 aa3.59□□□□□ -1.83
HMGB3P6-201ENST00000444896 U2AF2P26368 475 aaKnown RBP eCLIP3.59□□□□□ -1.83
HMGB3P6-201ENST00000444896 MARCKSP29966 332 aaPredicted RBP3.59□□□□□ -1.83
HMGB3P6-201ENST00000444896 MTIF2P46199 727 aaKnown RBP3.59□□□□□ -1.83
HMGB3P6-201ENST00000444896 PGFP49763 221 aa3.59□□□□□ -1.83
HMGB3P6-201ENST00000444896 RIDAP52758 137 aaKnown RBP3.59□□□□□ -1.83
HMGB3P6-201ENST00000444896 DSCR10P59022 87 aa3.59□□□□□ -1.83
HMGB3P6-201ENST00000444896 MYL5Q02045 173 aa3.59□□□□□ -1.83
HMGB3P6-201ENST00000444896 FCHO2Q0JRZ9 810 aa3.59□□□□□ -1.83
HMGB3P6-201ENST00000444896 NPRL3Q12980 569 aa3.59□□□□□ -1.83
HMGB3P6-201ENST00000444896 CCL14Q16627 93 aa3.59□□□□□ -1.83
HMGB3P6-201ENST00000444896 TPD52L1Q16890 204 aaPredicted RBP3.59□□□□□ -1.83
HMGB3P6-201ENST00000444896 ECSCRQ19T08 205 aa3.59□□□□□ -1.83
HMGB3P6-201ENST00000444896 CT45A2Q5DJT8 189 aa3.59□□□□□ -1.83
HMGB3P6-201ENST00000444896 RESP18Q5W5W9 173 aa3.59□□□□□ -1.83
HMGB3P6-201ENST00000444896 ZNF841Q6ZN19 808 aa3.59□□□□□ -1.83
HMGB3P6-201ENST00000444896 ITIH5Q86UX2 942 aa3.59□□□□□ -1.83
HMGB3P6-201ENST00000444896 NBPF5PQ86XG9 351 aaPredicted RBP3.59□□□□□ -1.83
HMGB3P6-201ENST00000444896 LMNTD2Q8IXW0 634 aa3.59□□□□□ -1.83
HMGB3P6-201ENST00000444896 BANPQ8N9N5 519 aa3.59□□□□□ -1.83
HMGB3P6-201ENST00000444896 CNNM3Q8NE01 707 aa3.59□□□□□ -1.83
HMGB3P6-201ENST00000444896 CCDC112Q8NEF3 446 aa3.59□□□□□ -1.83
HMGB3P6-201ENST00000444896 GLYATL1Q969I3 302 aa3.59□□□□□ -1.83
HMGB3P6-201ENST00000444896 MRPL24Q96A35 216 aaKnown RBP3.59□□□□□ -1.83
HMGB3P6-201ENST00000444896 PNPLA2Q96AD5 504 aa3.59□□□□□ -1.83
HMGB3P6-201ENST00000444896 CFAP36Q96G28 342 aa3.59□□□□□ -1.83
HMGB3P6-201ENST00000444896 JPT2Q9H910 190 aa3.59□□□□□ -1.83
HMGB3P6-201ENST00000444896 MARCH7Q9H992 704 aa3.59□□□□□ -1.83
HMGB3P6-201ENST00000444896 MTRRQ9UBK8 725 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms