RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 CDRT4Q8N9R6 151 aa13.03□□□□□ -0.32
SSBP3-208ENST00000444533 ADIPOR1Q96A54 375 aa13.03□□□□□ -0.32
SSBP3-208ENST00000444533 SPACA9Q96E40 222 aaPredicted RBP13.03□□□□□ -0.32
SSBP3-208ENST00000444533 BTBD9Q96Q07 612 aa13.03□□□□□ -0.32
SSBP3-208ENST00000444533 PANX1Q96RD7 426 aa13.03□□□□□ -0.32
SSBP3-208ENST00000444533 TRIM45Q9H8W5 580 aaPredicted RBP13.03□□□□□ -0.32
SSBP3-208ENST00000444533 ANKRA2Q9H9E1 313 aa13.03□□□□□ -0.32
SSBP3-208ENST00000444533 KLHL14Q9P2G3 628 aa13.03□□□□□ -0.32
SSBP3-208ENST00000444533 BTNL2Q9UIR0 455 aa13.03□□□□□ -0.32
SSBP3-208ENST00000444533 VPS4AQ9UN37 437 aa13.03□□□□□ -0.32
SSBP3-208ENST00000444533 NBEAQ8NFP9 2946 aa13.03□□□□□ -0.32
SSBP3-208ENST00000444533 TNRC6AQ8NDV7 1962 aaKnown RBP13.03□□□□□ -0.32
SSBP3-208ENST00000444533 CCDC154A6NI56 674 aa13.02□□□□□ -0.33
SSBP3-208ENST00000444533 TMEM200CA6NKL6 621 aa13.02□□□□□ -0.33
SSBP3-208ENST00000444533 REM1O75628 298 aa13.02□□□□□ -0.33
SSBP3-208ENST00000444533 CRYABP02511 175 aaKnown RBP13.02□□□□□ -0.33
SSBP3-208ENST00000444533 PRB1P04280 392 aa13.02□□□□□ -0.33
SSBP3-208ENST00000444533 ALOX5P09917 674 aa13.02□□□□□ -0.33
SSBP3-208ENST00000444533 FBXO45P0C2W1 286 aa13.02□□□□□ -0.33
SSBP3-208ENST00000444533 ABCD3P28288 659 aa13.02□□□□□ -0.33
SSBP3-208ENST00000444533 CHI3L1P36222 383 aaPredicted RBP13.02□□□□□ -0.33
SSBP3-208ENST00000444533 MRPL19P49406 292 aaKnown RBP13.02□□□□□ -0.33
SSBP3-208ENST00000444533 GNGT1P63211 74 aa13.02□□□□□ -0.33
SSBP3-208ENST00000444533 HBA1P69905 142 aa13.02□□□□□ -0.33
SSBP3-208ENST00000444533 NNATQ16517 81 aa13.02□□□□□ -0.33
SSBP3-208ENST00000444533 DECR1Q16698 335 aa13.02□□□□□ -0.33
SSBP3-208ENST00000444533 CYP27C1Q4G0S4 372 aa13.02□□□□□ -0.33
SSBP3-208ENST00000444533 FHL5Q5TD97 284 aa13.02□□□□□ -0.33
SSBP3-208ENST00000444533 SLC22A10Q63ZE4 541 aa13.02□□□□□ -0.33
SSBP3-208ENST00000444533 RPUSD3Q6P087 351 aaKnown RBP13.02□□□□□ -0.33
SSBP3-208ENST00000444533 PAOXQ6QHF9 649 aa13.02□□□□□ -0.33
SSBP3-208ENST00000444533 ANGPTL8Q6UXH0 198 aa13.02□□□□□ -0.33
SSBP3-208ENST00000444533 ANKRD46Q86W74 232 aa13.02□□□□□ -0.33
SSBP3-208ENST00000444533 SLC34A3Q8N130 599 aa13.02□□□□□ -0.33
SSBP3-208ENST00000444533 ZNF843Q8N446 348 aa13.02□□□□□ -0.33
SSBP3-208ENST00000444533 ZNF441Q8N8Z8 693 aa13.02□□□□□ -0.33
SSBP3-208ENST00000444533 MDS2Q8NDY4 140 aa13.02□□□□□ -0.33
SSBP3-208ENST00000444533 OR5M3Q8NGP4 307 aa13.02□□□□□ -0.33
SSBP3-208ENST00000444533 PSMA8Q8TAA3 256 aa13.02□□□□□ -0.33
SSBP3-208ENST00000444533 GPR151Q8TDV0 419 aa13.02□□□□□ -0.33
SSBP3-208ENST00000444533 SLC9A6Q92581 669 aa13.02□□□□□ -0.33
SSBP3-208ENST00000444533 TMCO6Q96DC7 493 aa13.02□□□□□ -0.33
SSBP3-208ENST00000444533 FAM120BQ96EK7 910 aaKnown RBP13.02□□□□□ -0.33
SSBP3-208ENST00000444533 ITCHQ96J02 903 aa13.02□□□□□ -0.33
SSBP3-208ENST00000444533 VSTM2LQ96N03 204 aa13.02□□□□□ -0.33
SSBP3-208ENST00000444533 SIGLEC12Q96PQ1 595 aa13.02□□□□□ -0.33
SSBP3-208ENST00000444533 FAM107BQ9H098 131 aa13.02□□□□□ -0.33
SSBP3-208ENST00000444533 NXF5Q9H1B4 397 aaKnown RBP13.02□□□□□ -0.33
SSBP3-208ENST00000444533 SACM1LQ9NTJ5 587 aa13.02□□□□□ -0.33
SSBP3-208ENST00000444533 CNIH4Q9P003 139 aa13.02□□□□□ -0.33
SSBP3-208ENST00000444533 CCDC167Q9P0B6 97 aa13.02□□□□□ -0.33
SSBP3-208ENST00000444533 NTMQ9P121 344 aa13.02□□□□□ -0.33
SSBP3-208ENST00000444533 LUZP4Q9P127 313 aa13.02□□□□□ -0.33
SSBP3-208ENST00000444533 RALYQ9UKM9 306 aaKnown RBP13.02□□□□□ -0.33
SSBP3-208ENST00000444533 GPR55Q9Y2T6 319 aaPredicted RBP13.02□□□□□ -0.33
SSBP3-208ENST00000444533 CSAG2Q9Y5P2 127 aa13.02□□□□□ -0.33
SSBP3-208ENST00000444533 COPG1Q9Y678 874 aaKnown RBP13.02□□□□□ -0.33
SSBP3-208ENST00000444533 RNF103-CHMP3A0A140T963 221 aa13.01□□□□□ -0.33
SSBP3-208ENST00000444533 GMNCA6NCL1 334 aa13.01□□□□□ -0.33
SSBP3-208ENST00000444533 DUXAA6NLW8 204 aa13.01□□□□□ -0.33
SSBP3-208ENST00000444533 RFXANKO14593 260 aa13.01□□□□□ -0.33
SSBP3-208ENST00000444533 SUV39H1O43463 412 aa13.01□□□□□ -0.33
SSBP3-208ENST00000444533 NEURL1O76050 574 aa13.01□□□□□ -0.33
SSBP3-208ENST00000444533 UQCRC2P22695 453 aa13.01□□□□□ -0.33
SSBP3-208ENST00000444533 LSP1P33241 339 aa13.01□□□□□ -0.33
SSBP3-208ENST00000444533 GABRA3P34903 492 aa13.01□□□□□ -0.33
SSBP3-208ENST00000444533 CLK3P49761 638 aaKnown RBP13.01□□□□□ -0.33
SSBP3-208ENST00000444533 ST13P50502 369 aaKnown RBP13.01□□□□□ -0.33
SSBP3-208ENST00000444533 DGKQP52824 942 aa13.01□□□□□ -0.33
SSBP3-208ENST00000444533 EFR3AQ14156 821 aa13.01□□□□□ -0.33
SSBP3-208ENST00000444533 AGKQ53H12 422 aa13.01□□□□□ -0.33
SSBP3-208ENST00000444533 TBCELQ5QJ74 424 aa13.01□□□□□ -0.33
SSBP3-208ENST00000444533 C6orf10Q5SRN2 563 aa13.01□□□□□ -0.33
SSBP3-208ENST00000444533 GK5Q6ZS86 529 aa13.01□□□□□ -0.33
SSBP3-208ENST00000444533 NUP54Q7Z3B4 507 aa13.01□□□□□ -0.33
SSBP3-208ENST00000444533 GALNTL5Q7Z4T8 443 aa13.01□□□□□ -0.33
SSBP3-208ENST00000444533 ZNF605Q86T29 641 aa13.01□□□□□ -0.33
SSBP3-208ENST00000444533 CLECL1Q8IZS7 167 aa13.01□□□□□ -0.33
SSBP3-208ENST00000444533 BCORP1Q8N888 145 aa13.01□□□□□ -0.33
SSBP3-208ENST00000444533 PSD4Q8NDX1 1056 aa13.01□□□□□ -0.33
SSBP3-208ENST00000444533 ADAMTS15Q8TE58 950 aa13.01□□□□□ -0.33
SSBP3-208ENST00000444533 OMA1Q96E52 524 aa13.01□□□□□ -0.33
SSBP3-208ENST00000444533 DTNBP1Q96EV8 351 aa13.01□□□□□ -0.33
SSBP3-208ENST00000444533 TEX37Q96LM6 180 aa13.01□□□□□ -0.33
SSBP3-208ENST00000444533 CCDC115Q96NT0 180 aa13.01□□□□□ -0.33
SSBP3-208ENST00000444533 ZNF317Q96PQ6 595 aaPredicted RBP13.01□□□□□ -0.33
SSBP3-208ENST00000444533 SECISBP2Q96T21 854 aaKnown RBP13.01□□□□□ -0.33
SSBP3-208ENST00000444533 ACTRT3Q9BYD9 372 aa13.01□□□□□ -0.33
SSBP3-208ENST00000444533 DTX4Q9Y2E6 619 aa13.01□□□□□ -0.33
SSBP3-208ENST00000444533 PCDHGA10Q9Y5H3 936 aa13.01□□□□□ -0.33
SSBP3-208ENST00000444533 CPAMD8Q8IZJ3 1885 aa13.01□□□□□ -0.33
SSBP3-208ENST00000444533 SPTA1P02549 2419 aa13.01□□□□□ -0.33
SSBP3-208ENST00000444533 C9JVG2 144 aa13□□□□□ -0.33
SSBP3-208ENST00000444533 ACOT7O00154 380 aa13□□□□□ -0.33
SSBP3-208ENST00000444533 NR5A2O00482 541 aa13□□□□□ -0.33
SSBP3-208ENST00000444533 TO15178 435 aa13□□□□□ -0.33
SSBP3-208ENST00000444533 SLC28A2O43868 658 aa13□□□□□ -0.33
SSBP3-208ENST00000444533 NME2P1O60361 137 aa13□□□□□ -0.33
SSBP3-208ENST00000444533 PPM1BO75688 479 aa13□□□□□ -0.33
SSBP3-208ENST00000444533 AGR2O95994 175 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms