RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 HCN1O60741 890 aa9.94□□□□□ -0.82
SF3A1-203ENST00000444440 CRCPO75575 148 aa9.94□□□□□ -0.82
SF3A1-203ENST00000444440 TOXO94900 526 aa9.94□□□□□ -0.82
SF3A1-203ENST00000444440 CHRNGP07510 517 aa9.94□□□□□ -0.82
SF3A1-203ENST00000444440 ANXA4P09525 319 aaPredicted RBP9.94□□□□□ -0.82
SF3A1-203ENST00000444440 DRD2P14416 443 aa9.94□□□□□ -0.82
SF3A1-203ENST00000444440 COX6B1P14854 86 aa9.94□□□□□ -0.82
SF3A1-203ENST00000444440 IGFBP2P18065 325 aa9.94□□□□□ -0.82
SF3A1-203ENST00000444440 PTPN6P29350 595 aa9.94□□□□□ -0.82
SF3A1-203ENST00000444440 ARRB2P32121 409 aa9.94□□□□□ -0.82
SF3A1-203ENST00000444440 CRYZQ08257 329 aaKnown RBP9.94□□□□□ -0.82
SF3A1-203ENST00000444440 ZNF763Q0D2J5 394 aa9.94□□□□□ -0.82
SF3A1-203ENST00000444440 KIAA0040Q15053 153 aa9.94□□□□□ -0.82
SF3A1-203ENST00000444440 SPDYAQ5MJ70 313 aa9.94□□□□□ -0.82
SF3A1-203ENST00000444440 C6orf163Q5TEZ5 329 aa9.94□□□□□ -0.82
SF3A1-203ENST00000444440 LIPMQ5VYY2 423 aa9.94□□□□□ -0.82
SF3A1-203ENST00000444440 TRIM46Q7Z4K8 759 aa9.94□□□□□ -0.82
SF3A1-203ENST00000444440 TRABD2AQ86V40 505 aa9.94□□□□□ -0.82
SF3A1-203ENST00000444440 OR4N2Q8NGD1 307 aa9.94□□□□□ -0.82
SF3A1-203ENST00000444440 LILRB4Q8NHJ6 448 aa9.94□□□□□ -0.82
SF3A1-203ENST00000444440 NEIL3Q8TAT5 605 aa9.94□□□□□ -0.82
SF3A1-203ENST00000444440 RND1Q92730 232 aa9.94□□□□□ -0.82
SF3A1-203ENST00000444440 TMEM41AQ96HV5 264 aa9.94□□□□□ -0.82
SF3A1-203ENST00000444440 VSTM2LQ96N03 204 aa9.94□□□□□ -0.82
SF3A1-203ENST00000444440 TREX2Q9BQ50 279 aaPredicted RBP9.94□□□□□ -0.82
SF3A1-203ENST00000444440 ACKR4Q9NPB9 350 aa9.94□□□□□ -0.82
SF3A1-203ENST00000444440 PFDN4Q9NQP4 134 aa9.94□□□□□ -0.82
SF3A1-203ENST00000444440 SLC35C2Q9NQQ7 365 aa9.94□□□□□ -0.82
SF3A1-203ENST00000444440 COQ3Q9NZJ6 369 aa9.94□□□□□ -0.82
SF3A1-203ENST00000444440 SLC17A7Q9P2U7 560 aa9.94□□□□□ -0.82
SF3A1-203ENST00000444440 LGALS13Q9UHV8 139 aa9.94□□□□□ -0.82
SF3A1-203ENST00000444440 ACAD8Q9UKU7 415 aa9.94□□□□□ -0.82
SF3A1-203ENST00000444440 GPR55Q9Y2T6 319 aaPredicted RBP9.94□□□□□ -0.82
SF3A1-203ENST00000444440 C15orf41Q9Y2V0 281 aa9.94□□□□□ -0.82
SF3A1-203ENST00000444440 SLC6A5Q9Y345 797 aa9.94□□□□□ -0.82
SF3A1-203ENST00000444440 ZNF780BQ9Y6R6 833 aa9.94□□□□□ -0.82
SF3A1-203ENST00000444440 ANKRD17O75179 2603 aaKnown RBP9.94□□□□□ -0.82
SF3A1-203ENST00000444440 FRG2CA6NGY1 282 aa9.93□□□□□ -0.82
SF3A1-203ENST00000444440 MYO1GB0I1T2 1018 aa9.93□□□□□ -0.82
SF3A1-203ENST00000444440 TMEM233B4DJY2 109 aa9.93□□□□□ -0.82
SF3A1-203ENST00000444440 TP53I11O14683 189 aa9.93□□□□□ -0.82
SF3A1-203ENST00000444440 TSPAN2O60636 221 aa9.93□□□□□ -0.82
SF3A1-203ENST00000444440 TRIM13O60858 407 aa9.93□□□□□ -0.82
SF3A1-203ENST00000444440 ICOSLGO75144 302 aa9.93□□□□□ -0.82
SF3A1-203ENST00000444440 SPAG7O75391 227 aa9.93□□□□□ -0.82
SF3A1-203ENST00000444440 ERLIN1O75477 346 aa9.93□□□□□ -0.82
SF3A1-203ENST00000444440 HPNP05981 417 aa9.93□□□□□ -0.82
SF3A1-203ENST00000444440 DDCP20711 480 aa9.93□□□□□ -0.82
SF3A1-203ENST00000444440 ALDH3A1P30838 453 aa9.93□□□□□ -0.82
SF3A1-203ENST00000444440 CHRNB4P30926 498 aa9.93□□□□□ -0.82
SF3A1-203ENST00000444440 PTGER4P35408 488 aa9.93□□□□□ -0.82
SF3A1-203ENST00000444440 PPICP45877 212 aa9.93□□□□□ -0.82
SF3A1-203ENST00000444440 TMED10P49755 219 aaKnown RBP9.93□□□□□ -0.82
SF3A1-203ENST00000444440 CDK9P50750 372 aaKnown RBP9.93□□□□□ -0.82
SF3A1-203ENST00000444440 NRG3P56975 720 aa9.93□□□□□ -0.82
SF3A1-203ENST00000444440 C2orf80Q0P641 193 aa9.93□□□□□ -0.82
SF3A1-203ENST00000444440 PLCXD2Q0VAA5 305 aa9.93□□□□□ -0.82
SF3A1-203ENST00000444440 EIPR1Q53HC9 387 aa9.93□□□□□ -0.82
SF3A1-203ENST00000444440 ZNF385BQ569K4 471 aa9.93□□□□□ -0.82
SF3A1-203ENST00000444440 WIPI1Q5MNZ9 446 aaPredicted RBP9.93□□□□□ -0.82
SF3A1-203ENST00000444440 C1orf185Q5T7R7 199 aa9.93□□□□□ -0.82
SF3A1-203ENST00000444440 TMEM211Q6ICI0 200 aa9.93□□□□□ -0.82
SF3A1-203ENST00000444440 ANGPTL8Q6UXH0 198 aa9.93□□□□□ -0.82
SF3A1-203ENST00000444440 B3GNT6Q6ZMB0 384 aa9.93□□□□□ -0.82
SF3A1-203ENST00000444440 Q6ZSR9 355 aa9.93□□□□□ -0.82
SF3A1-203ENST00000444440 WDR53Q7Z5U6 358 aaPredicted RBP9.93□□□□□ -0.82
SF3A1-203ENST00000444440 ULK2Q8IYT8 1036 aa9.93□□□□□ -0.82
SF3A1-203ENST00000444440 BANPQ8N9N5 519 aa9.93□□□□□ -0.82
SF3A1-203ENST00000444440 NAXEQ8NCW5 288 aa9.93□□□□□ -0.82
SF3A1-203ENST00000444440 TMBIM1Q969X1 311 aa9.93□□□□□ -0.82
SF3A1-203ENST00000444440 SARAFQ96BY9 339 aa9.93□□□□□ -0.82
SF3A1-203ENST00000444440 APOPT1Q96IL0 206 aa9.93□□□□□ -0.82
SF3A1-203ENST00000444440 BTBD9Q96Q07 612 aa9.93□□□□□ -0.82
SF3A1-203ENST00000444440 SECISBP2Q96T21 854 aaKnown RBP9.93□□□□□ -0.82
SF3A1-203ENST00000444440 EXO5Q9H790 373 aa9.93□□□□□ -0.82
SF3A1-203ENST00000444440 FOLH1BQ9HBA9 442 aa9.93□□□□□ -0.82
SF3A1-203ENST00000444440 MYNNQ9NPC7 610 aa9.93□□□□□ -0.82
SF3A1-203ENST00000444440 MKS1Q9NXB0 559 aa9.93□□□□□ -0.82
SF3A1-203ENST00000444440 QPCTLQ9NXS2 382 aa9.93□□□□□ -0.82
SF3A1-203ENST00000444440 SENP1Q9P0U3 644 aa9.93□□□□□ -0.82
SF3A1-203ENST00000444440 PSME2Q9UL46 239 aa9.93□□□□□ -0.82
SF3A1-203ENST00000444440 FIS1Q9Y3D6 152 aa9.93□□□□□ -0.82
SF3A1-203ENST00000444440 VPS13CQ709C8 3753 aa9.93□□□□□ -0.82
SF3A1-203ENST00000444440 HEATR5AQ86XA9 2040 aa9.93□□□□□ -0.82
SF3A1-203ENST00000444440 FIGNL2A6NMB9 653 aa9.92□□□□□ -0.82
SF3A1-203ENST00000444440 CAPN14A8MX76 684 aa9.92□□□□□ -0.82
SF3A1-203ENST00000444440 SNPHO15079 494 aa9.92□□□□□ -0.82
SF3A1-203ENST00000444440 TO15178 435 aa9.92□□□□□ -0.82
SF3A1-203ENST00000444440 RGS16O15492 202 aaPredicted RBP9.92□□□□□ -0.82
SF3A1-203ENST00000444440 RSL1D1O76021 490 aaKnown RBP9.92□□□□□ -0.82
SF3A1-203ENST00000444440 JUNP05412 331 aaKnown RBP9.92□□□□□ -0.82
SF3A1-203ENST00000444440 UROSP10746 265 aa9.92□□□□□ -0.82
SF3A1-203ENST00000444440 DRD5P21918 477 aa9.92□□□□□ -0.82
SF3A1-203ENST00000444440 MSX1P28360 303 aa9.92□□□□□ -0.82
SF3A1-203ENST00000444440 MC3RP41968 323 aa9.92□□□□□ -0.82
SF3A1-203ENST00000444440 PSG6Q00889 435 aa9.92□□□□□ -0.82
SF3A1-203ENST00000444440 HEPACAMQ14CZ8 416 aa9.92□□□□□ -0.82
SF3A1-203ENST00000444440 IMPG1Q17R60 797 aa9.92□□□□□ -0.82
SF3A1-203ENST00000444440 KRT71Q3SY84 523 aa9.92□□□□□ -0.82
SF3A1-203ENST00000444440 TBCELQ5QJ74 424 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms