RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 SPAG7O75391 227 aa17.25■□□□□ 0.35
ATPAF2-201ENST00000444058 CT45A8P0DMV1 189 aa17.25■□□□□ 0.35
ATPAF2-201ENST00000444058 CT45A9P0DMV2 189 aa17.25■□□□□ 0.35
ATPAF2-201ENST00000444058 ACVR2AP27037 513 aa17.25■□□□□ 0.35
ATPAF2-201ENST00000444058 PLCXD2Q0VAA5 305 aa17.25■□□□□ 0.35
ATPAF2-201ENST00000444058 NNATQ16517 81 aa17.25■□□□□ 0.35
ATPAF2-201ENST00000444058 UGT3A2Q3SY77 523 aa17.25■□□□□ 0.35
ATPAF2-201ENST00000444058 CT45A2Q5DJT8 189 aa17.25■□□□□ 0.35
ATPAF2-201ENST00000444058 ARL13AQ5H913 290 aaPredicted RBP17.25■□□□□ 0.35
ATPAF2-201ENST00000444058 FNDC7Q5VTL7 733 aa17.25■□□□□ 0.35
ATPAF2-201ENST00000444058 PRR22Q8IZ63 422 aa17.25■□□□□ 0.35
ATPAF2-201ENST00000444058 MARVELD2Q8N4S9 558 aa17.25■□□□□ 0.35
ATPAF2-201ENST00000444058 NEIL3Q8TAT5 605 aa17.25■□□□□ 0.35
ATPAF2-201ENST00000444058 CA5BP1Q8WTZ4 195 aa17.25■□□□□ 0.35
ATPAF2-201ENST00000444058 ASB5Q8WWX0 329 aa17.25■□□□□ 0.35
ATPAF2-201ENST00000444058 RND1Q92730 232 aa17.25■□□□□ 0.35
ATPAF2-201ENST00000444058 KAT2AQ92830 837 aa17.25■□□□□ 0.35
ATPAF2-201ENST00000444058 MARVELD3Q96A59 401 aa17.25■□□□□ 0.35
ATPAF2-201ENST00000444058 SLC35A4Q96G79 324 aa17.25■□□□□ 0.35
ATPAF2-201ENST00000444058 JSRP1Q96MG2 331 aaPredicted RBP17.25■□□□□ 0.35
ATPAF2-201ENST00000444058 TUBB1Q9H4B7 451 aa17.25■□□□□ 0.35
ATPAF2-201ENST00000444058 PNPLA3Q9NST1 481 aa17.25■□□□□ 0.35
ATPAF2-201ENST00000444058 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.25■□□□□ 0.35
ATPAF2-201ENST00000444058 ACAD8Q9UKU7 415 aa17.25■□□□□ 0.35
ATPAF2-201ENST00000444058 TRAF6Q9Y4K3 522 aa17.25■□□□□ 0.35
ATPAF2-201ENST00000444058 V9GYY5 206 aaPredicted RBP17.25■□□□□ 0.35
ATPAF2-201ENST00000444058 ITPR2Q14571 2701 aa17.25■□□□□ 0.35
ATPAF2-201ENST00000444058 TBX19O60806 448 aa17.24■□□□□ 0.35
ATPAF2-201ENST00000444058 COQ9O75208 318 aa17.24■□□□□ 0.35
ATPAF2-201ENST00000444058 ERN1O75460 977 aaKnown RBP17.24■□□□□ 0.35
ATPAF2-201ENST00000444058 HPNP05981 417 aa17.24■□□□□ 0.35
ATPAF2-201ENST00000444058 CHRNGP07510 517 aa17.24■□□□□ 0.35
ATPAF2-201ENST00000444058 ENDOUP21128 410 aaKnown RBP17.24■□□□□ 0.35
ATPAF2-201ENST00000444058 GRNP28799 593 aaKnown RBP17.24■□□□□ 0.35
ATPAF2-201ENST00000444058 NTSP30990 170 aa17.24■□□□□ 0.35
ATPAF2-201ENST00000444058 PTGER4P35408 488 aa17.24■□□□□ 0.35
ATPAF2-201ENST00000444058 MASP1P48740 699 aa17.24■□□□□ 0.35
ATPAF2-201ENST00000444058 NCBP2P52298 156 aaKnown RBP eCLIP17.24■□□□□ 0.351e-6■■□□□ 13
ATPAF2-201ENST00000444058 WLSQ5T9L3 541 aa17.24■□□□□ 0.35
ATPAF2-201ENST00000444058 BICRALQ6AI39 1079 aa17.24■□□□□ 0.35
ATPAF2-201ENST00000444058 TIGD3Q6B0B8 471 aa17.24■□□□□ 0.35
ATPAF2-201ENST00000444058 NCCRP1Q6ZVX7 275 aaPredicted RBP17.24■□□□□ 0.35
ATPAF2-201ENST00000444058 OR7G2Q8NG99 324 aa17.24■□□□□ 0.35
ATPAF2-201ENST00000444058 OR6Y1Q8NGX8 325 aa17.24■□□□□ 0.35
ATPAF2-201ENST00000444058 OR2T11Q8NH01 316 aa17.24■□□□□ 0.35
ATPAF2-201ENST00000444058 CDC26Q8NHZ8 85 aa17.24■□□□□ 0.35
ATPAF2-201ENST00000444058 SDCCAG3Q96C92 435 aa17.24■□□□□ 0.35
ATPAF2-201ENST00000444058 TMCO6Q96DC7 493 aa17.24■□□□□ 0.35
ATPAF2-201ENST00000444058 EXO5Q9H790 373 aa17.24■□□□□ 0.35
ATPAF2-201ENST00000444058 METTL7AQ9H8H3 244 aa17.24■□□□□ 0.35
ATPAF2-201ENST00000444058 C19orf53Q9UNZ5 99 aaPredicted RBP17.24■□□□□ 0.35
ATPAF2-201ENST00000444058 C15orf41Q9Y2V0 281 aa17.24■□□□□ 0.35
ATPAF2-201ENST00000444058 CELSR2Q9HCU4 2923 aa17.24■□□□□ 0.35
ATPAF2-201ENST00000444058 LSM1O15116 133 aaKnown RBP17.23■□□□□ 0.35
ATPAF2-201ENST00000444058 UGT2B11O75310 529 aa17.23■□□□□ 0.35
ATPAF2-201ENST00000444058 LRATO95237 230 aa17.23■□□□□ 0.35
ATPAF2-201ENST00000444058 GABRA1P14867 456 aa17.23■□□□□ 0.35
ATPAF2-201ENST00000444058 TACR1P25103 407 aa17.23■□□□□ 0.35
ATPAF2-201ENST00000444058 GDF1P27539 372 aa17.23■□□□□ 0.35
ATPAF2-201ENST00000444058 CHRNB4P30926 498 aa17.23■□□□□ 0.35
ATPAF2-201ENST00000444058 ETV4P43268 484 aa17.23■□□□□ 0.35
ATPAF2-201ENST00000444058 CDK9P50750 372 aaKnown RBP17.23■□□□□ 0.35
ATPAF2-201ENST00000444058 ZNF844Q08AG5 666 aa17.23■□□□□ 0.35
ATPAF2-201ENST00000444058 CDSNQ15517 529 aa17.23■□□□□ 0.35
ATPAF2-201ENST00000444058 PRSS53Q2L4Q9 553 aa17.23■□□□□ 0.35
ATPAF2-201ENST00000444058 OR2L13Q8N349 312 aa17.23■□□□□ 0.35
ATPAF2-201ENST00000444058 LIX1Q8N485 282 aa17.23■□□□□ 0.35
ATPAF2-201ENST00000444058 AMDHD1Q96NU7 426 aa17.23■□□□□ 0.35
ATPAF2-201ENST00000444058 COL21A1Q96P44 957 aa17.23■□□□□ 0.35
ATPAF2-201ENST00000444058 MECRQ9BV79 373 aa17.23■□□□□ 0.35
ATPAF2-201ENST00000444058 ANKRA2Q9H9E1 313 aa17.23■□□□□ 0.35
ATPAF2-201ENST00000444058 FOLH1BQ9HBA9 442 aa17.23■□□□□ 0.35
ATPAF2-201ENST00000444058 SSU72Q9NP77 194 aaKnown RBP17.23■□□□□ 0.35
ATPAF2-201ENST00000444058 SPRR3Q9UBC9 169 aa17.23■□□□□ 0.35
ATPAF2-201ENST00000444058 PTGDR2Q9Y5Y4 395 aa17.23■□□□□ 0.35
ATPAF2-201ENST00000444058 TEX15Q9BXT5 2789 aa17.23■□□□□ 0.35
ATPAF2-201ENST00000444058 CRYBG3Q68DQ2 2970 aa17.22■□□□□ 0.35
ATPAF2-201ENST00000444058 NINQ8N4C6 2090 aa17.22■□□□□ 0.35
ATPAF2-201ENST00000444058 ICOSLGO75144 302 aa17.22■□□□□ 0.35
ATPAF2-201ENST00000444058 PSMG1O95456 288 aa17.22■□□□□ 0.35
ATPAF2-201ENST00000444058 JUNP05412 331 aaKnown RBP17.22■□□□□ 0.35
ATPAF2-201ENST00000444058 BPGMP07738 259 aa17.22■□□□□ 0.35
ATPAF2-201ENST00000444058 LINC00032P0C843 101 aa17.22■□□□□ 0.35
ATPAF2-201ENST00000444058 CREB1P16220 341 aa17.22■□□□□ 0.35
ATPAF2-201ENST00000444058 CORO7P57737 925 aa17.22■□□□□ 0.35
ATPAF2-201ENST00000444058 MRPS22P82650 360 aaKnown RBP17.22■□□□□ 0.35
ATPAF2-201ENST00000444058 EFR3AQ14156 821 aa17.22■□□□□ 0.35
ATPAF2-201ENST00000444058 KRT71Q3SY84 523 aa17.22■□□□□ 0.35
ATPAF2-201ENST00000444058 RFTN2Q52LD8 501 aaPredicted RBP17.22■□□□□ 0.35
ATPAF2-201ENST00000444058 NHSL2Q5HYW2 709 aa17.22■□□□□ 0.35
ATPAF2-201ENST00000444058 ZNF585AQ6P3V2 769 aa17.22■□□□□ 0.35
ATPAF2-201ENST00000444058 B3GNT6Q6ZMB0 384 aa17.22■□□□□ 0.35
ATPAF2-201ENST00000444058 CROCCP2Q86T23 111 aa17.22■□□□□ 0.35
ATPAF2-201ENST00000444058 OR5M9Q8NGP3 310 aa17.22■□□□□ 0.35
ATPAF2-201ENST00000444058 OR1J4Q8NGS1 313 aa17.22■□□□□ 0.35
ATPAF2-201ENST00000444058 LILRB4Q8NHJ6 448 aa17.22■□□□□ 0.35
ATPAF2-201ENST00000444058 TWIST2Q8WVJ9 160 aa17.22■□□□□ 0.35
ATPAF2-201ENST00000444058 TMBIM1Q969X1 311 aa17.22■□□□□ 0.35
ATPAF2-201ENST00000444058 EGLN2Q96KS0 407 aa17.22■□□□□ 0.35
ATPAF2-201ENST00000444058 GNRHR2Q96P88 292 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms