RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 NTNG1Q9Y2I2 539 aa14.78□□□□□ -0.04
USP39-205ENST00000442708 SNX8Q9Y5X2 465 aa14.78□□□□□ -0.04
USP39-205ENST00000442708 NPFFR2Q9Y5X5 522 aa14.78□□□□□ -0.04
USP39-205ENST00000442708 SPENQ96T58 3664 aaKnown RBP14.78□□□□□ -0.04
USP39-205ENST00000442708 PRSS51A0A1B0GVH4 220 aa14.77□□□□□ -0.05
USP39-205ENST00000442708 FRG2CA6NGY1 282 aa14.77□□□□□ -0.05
USP39-205ENST00000442708 B8ZZF3 427 aa14.77□□□□□ -0.05
USP39-205ENST00000442708 CDK2AP1O14519 115 aa14.77□□□□□ -0.05
USP39-205ENST00000442708 TO15178 435 aa14.77□□□□□ -0.05
USP39-205ENST00000442708 CFLARO15519 480 aa14.77□□□□□ -0.05
USP39-205ENST00000442708 COQ9O75208 318 aa14.77□□□□□ -0.05
USP39-205ENST00000442708 SLC25A12O75746 678 aa14.77□□□□□ -0.05
USP39-205ENST00000442708 PGRP06401 933 aa14.77□□□□□ -0.05
USP39-205ENST00000442708 NCF2P19878 526 aaPredicted RBP14.77□□□□□ -0.05
USP39-205ENST00000442708 ABCD3P28288 659 aa14.77□□□□□ -0.05
USP39-205ENST00000442708 LSP1P33241 339 aa14.77□□□□□ -0.05
USP39-205ENST00000442708 CDKN2CP42773 168 aa14.77□□□□□ -0.05
USP39-205ENST00000442708 CCT3P49368 545 aaKnown RBP14.77□□□□□ -0.05
USP39-205ENST00000442708 ATP4BP51164 291 aa14.77□□□□□ -0.05
USP39-205ENST00000442708 POLR2JP52435 117 aaKnown RBP14.77□□□□□ -0.05
USP39-205ENST00000442708 EXOSC6Q5RKV6 272 aaKnown RBP14.77□□□□□ -0.05
USP39-205ENST00000442708 OPN5Q6U736 354 aa14.77□□□□□ -0.05
USP39-205ENST00000442708 SLC44A2Q8IWA5 706 aaPredicted RBP14.77□□□□□ -0.05
USP39-205ENST00000442708 GLB1L3Q8NCI6 653 aaPredicted RBP14.77□□□□□ -0.05
USP39-205ENST00000442708 OR4A15Q8NGL6 344 aa14.77□□□□□ -0.05
USP39-205ENST00000442708 C10orf82Q8WW14 230 aa14.77□□□□□ -0.05
USP39-205ENST00000442708 VPS33AQ96AX1 596 aa14.77□□□□□ -0.05
USP39-205ENST00000442708 SPACA9Q96E40 222 aaPredicted RBP14.77□□□□□ -0.05
USP39-205ENST00000442708 OTUB1Q96FW1 271 aaPredicted RBP14.77□□□□□ -0.05
USP39-205ENST00000442708 CCDC115Q96NT0 180 aa14.77□□□□□ -0.05
USP39-205ENST00000442708 OR52E6Q96RD3 313 aa14.77□□□□□ -0.05
USP39-205ENST00000442708 YIPF4Q9BSR8 244 aa14.77□□□□□ -0.05
USP39-205ENST00000442708 EPN3Q9H201 632 aa14.77□□□□□ -0.05
USP39-205ENST00000442708 C3orf14Q9HBI5 128 aa14.77□□□□□ -0.05
USP39-205ENST00000442708 SH2D2AQ9NP31 389 aa14.77□□□□□ -0.05
USP39-205ENST00000442708 SLC52A3Q9NQ40 469 aa14.77□□□□□ -0.05
USP39-205ENST00000442708 SERHLQ9NQF3 203 aa14.77□□□□□ -0.05
USP39-205ENST00000442708 ZCCHC3Q9NUD5 404 aaKnown RBP14.77□□□□□ -0.05
USP39-205ENST00000442708 FAM120CQ9NX05 1096 aaKnown RBP14.77□□□□□ -0.05
USP39-205ENST00000442708 A0A0G2JMM0 328 aa14.76□□□□□ -0.05
USP39-205ENST00000442708 A0A1W2PPB8 328 aa14.76□□□□□ -0.05
USP39-205ENST00000442708 A0A1W2PRS3 328 aa14.76□□□□□ -0.05
USP39-205ENST00000442708 FAM234BA2RU67 622 aa14.76□□□□□ -0.05
USP39-205ENST00000442708 ASPDHA6ND91 283 aa14.76□□□□□ -0.05
USP39-205ENST00000442708 EIF4E1BA6NMX2 242 aaKnown RBP14.76□□□□□ -0.05
USP39-205ENST00000442708 KIR3DP1A8MWS1 328 aa14.76□□□□□ -0.05
USP39-205ENST00000442708 NME2P1O60361 137 aa14.76□□□□□ -0.05
USP39-205ENST00000442708 CPSF4O95639 269 aaKnown RBP14.76□□□□□ -0.05
USP39-205ENST00000442708 CCL3P10147 92 aa14.76□□□□□ -0.05
USP39-205ENST00000442708 ACP2P11117 423 aa14.76□□□□□ -0.05
USP39-205ENST00000442708 DRD4P21917 467 aa14.76□□□□□ -0.05
USP39-205ENST00000442708 NME2P22392 152 aa14.76□□□□□ -0.05
USP39-205ENST00000442708 ARFIP2P53365 341 aa14.76□□□□□ -0.05
USP39-205ENST00000442708 MLLT10P55197 1068 aa14.76□□□□□ -0.05
USP39-205ENST00000442708 FBXW4P57775 412 aa14.76□□□□□ -0.05
USP39-205ENST00000442708 STX1BP61266 288 aa14.76□□□□□ -0.05
USP39-205ENST00000442708 DCAF7P61962 342 aa14.76□□□□□ -0.05
USP39-205ENST00000442708 GNGT1P63211 74 aa14.76□□□□□ -0.05
USP39-205ENST00000442708 PMP22Q01453 160 aa14.76□□□□□ -0.05
USP39-205ENST00000442708 GAB1Q13480 694 aa14.76□□□□□ -0.05
USP39-205ENST00000442708 TIGD2Q4W5G0 525 aa14.76□□□□□ -0.05
USP39-205ENST00000442708 ANXA8L1Q5VT79 327 aa14.76□□□□□ -0.05
USP39-205ENST00000442708 SLC25A25Q6KCM7 469 aa14.76□□□□□ -0.05
USP39-205ENST00000442708 MFSD12Q6NUT3 480 aa14.76□□□□□ -0.05
USP39-205ENST00000442708 SZRD1Q7Z422 152 aa14.76□□□□□ -0.05
USP39-205ENST00000442708 GALNTL5Q7Z4T8 443 aa14.76□□□□□ -0.05
USP39-205ENST00000442708 GPALPP1Q8IXQ4 340 aa14.76□□□□□ -0.05
USP39-205ENST00000442708 OR10G3Q8NGC4 313 aa14.76□□□□□ -0.05
USP39-205ENST00000442708 OR5M3Q8NGP4 307 aa14.76□□□□□ -0.05
USP39-205ENST00000442708 FBXO30Q8TB52 745 aa14.76□□□□□ -0.05
USP39-205ENST00000442708 OMA1Q96E52 524 aa14.76□□□□□ -0.05
USP39-205ENST00000442708 HSPBAP1Q96EW2 488 aa14.76□□□□□ -0.05
USP39-205ENST00000442708 TAAR6Q96RI8 345 aa14.76□□□□□ -0.05
USP39-205ENST00000442708 LMF2Q9BU23 707 aaKnown RBP14.76□□□□□ -0.05
USP39-205ENST00000442708 SLC6A13Q9NSD5 602 aa14.76□□□□□ -0.05
USP39-205ENST00000442708 DEPPQ9NTK1 212 aa14.76□□□□□ -0.05
USP39-205ENST00000442708 GPATCH2Q9NW75 528 aa14.76□□□□□ -0.05
USP39-205ENST00000442708 KLHL14Q9P2G3 628 aa14.76□□□□□ -0.05
USP39-205ENST00000442708 BTNL2Q9UIR0 455 aa14.76□□□□□ -0.05
USP39-205ENST00000442708 CHCHD2Q9Y6H1 151 aaPredicted RBP14.76□□□□□ -0.05
USP39-205ENST00000442708 ZNF462Q96JM2 2506 aa14.75□□□□□ -0.05
USP39-205ENST00000442708 GXYLT2A0PJZ3 443 aa14.75□□□□□ -0.05
USP39-205ENST00000442708 G3V3Y1 287 aa14.75□□□□□ -0.05
USP39-205ENST00000442708 ACOX3O15254 700 aa14.75□□□□□ -0.05
USP39-205ENST00000442708 HMGN2P05204 90 aaKnown RBP14.75□□□□□ -0.05
USP39-205ENST00000442708 IL6P05231 212 aa14.75□□□□□ -0.05
USP39-205ENST00000442708 CD46P15529 392 aa14.75□□□□□ -0.05
USP39-205ENST00000442708 SOAT1P35610 550 aa14.75□□□□□ -0.05
USP39-205ENST00000442708 SQLEQ14534 574 aa14.75□□□□□ -0.05
USP39-205ENST00000442708 NTRK2Q16620 822 aa14.75□□□□□ -0.05
USP39-205ENST00000442708 MAPKAPK3Q16644 382 aa14.75□□□□□ -0.05
USP39-205ENST00000442708 AGKQ53H12 422 aa14.75□□□□□ -0.05
USP39-205ENST00000442708 RPUSD3Q6P087 351 aaKnown RBP14.75□□□□□ -0.05
USP39-205ENST00000442708 BLOC1S3Q6QNY0 202 aa14.75□□□□□ -0.05
USP39-205ENST00000442708 RTL4Q6ZR62 310 aa14.75□□□□□ -0.05
USP39-205ENST00000442708 TAGAPQ8N103 731 aa14.75□□□□□ -0.05
USP39-205ENST00000442708 SLC34A3Q8N130 599 aa14.75□□□□□ -0.05
USP39-205ENST00000442708 CISD2Q8N5K1 135 aaKnown RBP14.75□□□□□ -0.05
USP39-205ENST00000442708 HORMAD2Q8N7B1 307 aa14.75□□□□□ -0.05
USP39-205ENST00000442708 SLC16A11Q8NCK7 471 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms