RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 RBM4BQ9BQ04 359 aaKnown RBP6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 RBM4Q9BWF3 364 aaKnown RBP6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 REXO4Q9GZR2 422 aaKnown RBP6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 PIF1Q9H611 641 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 EXO1Q9UQ84 846 aaKnown RBP6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 HSPE1-MOB4S4R3N1 261 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 COL4A2P08572 1712 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 SGK494L7N484 410 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 EIF3FO00303 357 aaPredicted RBP6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 MITFO75030 526 aaPredicted RBP6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 C8orf89P0DMQ9 161 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 ICAM2P13598 275 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 CASP2P42575 452 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 LIMS1P48059 325 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 FBXW4P57775 412 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 MAT1AQ00266 395 aaKnown RBP6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 FADDQ13158 208 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 RTP5Q14D33 572 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 NR6A1Q15406 480 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 SLC5A12Q1EHB4 618 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 HKDC1Q2TB90 917 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 FAM174BQ3ZCQ3 159 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 UBE2UQ5VVX9 321 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 MSANTD1Q6ZTZ1 278 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 SERPINA11Q86U17 422 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 IFNEQ86WN2 208 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 ZZZ3Q8IYH5 903 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 OR2T12Q8NG77 320 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 PHF10Q8WUB8 498 aaKnown RBP6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 THOC3Q96J01 351 aaKnown RBP6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 ITCHQ96J02 903 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 ZBTB18Q99592 522 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 SLC12A9Q9BXP2 914 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 GABARAPL3Q9BY60 117 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 ZNF768Q9H5H4 540 aaKnown RBP6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 IL1RAPQ9NPH3 570 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 IL17BQ9UHF5 180 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 ADGRE2Q9UHX3 823 aa6.94□□□□□ -1.3
CDC42BPA-208ENST00000442054 ELOVL7A1L3X0 281 aa6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 OR2A25A4D2G3 310 aa6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 EFSO43281 561 aa6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 CDC40O60508 579 aaKnown RBP eCLIP6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 SLCO2B1O94956 709 aa6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 OTCP00480 354 aa6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 LIFP15018 202 aa6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 GPX2P18283 190 aa6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 PRKACGP22612 351 aa6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 RAE1P78406 368 aaKnown RBP6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 TAP2Q03519 686 aa6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 RBPJQ06330 500 aa6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 MAPKAPK3Q16644 382 aa6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 LIX1Q8N485 282 aa6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 SLC5A8Q8N695 610 aa6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 BPIFB6Q8NFQ5 453 aa6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 OR1L3Q8NH93 324 aa6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 DNAJB8Q8NHS0 232 aa6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.93□□□□□ -1.32e-7■■□□□ 13
CDC42BPA-208ENST00000442054 BAHD1Q8TBE0 780 aaPredicted RBP6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 ZFP90Q8TF47 636 aa6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 THAP4Q8WY91 577 aa6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 LDAHQ9H6V9 325 aa6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 KLHL1Q9NR64 748 aa6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 GPATCH2Q9NW75 528 aa6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 CUEDC1Q9NWM3 386 aaPredicted RBP6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 ZNF780BQ9Y6R6 833 aa6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 C21orf140B9A014 251 aa6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 GFYI3L273 518 aa6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 M0R082 166 aa6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 CASC3O15234 703 aaKnown RBP6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 MRPS14O60783 128 aaKnown RBP6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 CLDN9O95484 217 aa6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 ABCB1P08183 1280 aaPredicted RBP6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 C1GALT1C1LP0DN25 315 aa6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 BMP4P12644 408 aa6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 SDC1P18827 310 aa6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 HPCAL1P37235 193 aa6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 ESRRGP62508 458 aa6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 ID2Q02363 134 aa6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 IRF3Q14653 427 aa6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 FAM98BQ52LJ0 330 aaKnown RBP6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 OTUD3Q5T2D3 398 aaPredicted RBP6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 CAMKMTQ7Z624 323 aa6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 SLITRK4Q8IW52 837 aa6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 C8orf59Q8N0T1 100 aaPredicted RBP6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 CADM3Q8N126 398 aa6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 OR4C15Q8NGM1 316 aa6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 OR6Q1Q8NGQ2 317 aa6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 NDNFQ8TB73 568 aa6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 CNIH3Q8TBE1 160 aa6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 WDR20Q8TBZ3 569 aa6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 STT3BQ8TCJ2 826 aa6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 FAM131CQ96AQ9 280 aa6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 PYURFQ96I23 114 aa6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 PPP3R2Q96LZ3 170 aa6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 DGAT2Q96PD7 388 aa6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 GPR87Q9BY21 358 aa6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 NECTIN3Q9NQS3 549 aa6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 GPRC5BQ9NZH0 403 aa6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 TMEM247A6NEH6 219 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms