RNA–Protein interactions for RNA: ENST00000439984.7

PCNX1-202, Transcript of pecanex 1, humanhuman

TSL 1 (best) BASIC

Gene PCNX1, Length 6,988 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-202ENST00000439984 UBXN11Q5T124 520 aa13.96□□□□□ -0.17
PCNX1-202ENST00000439984 ARFGAP1Q8N6T3 406 aa13.96□□□□□ -0.17
PCNX1-202ENST00000439984 FUBP1Q96AE4 644 aaKnown RBP13.96□□□□□ -0.17
PCNX1-202ENST00000439984 OR5B12Q96R08 314 aa13.96□□□□□ -0.17
PCNX1-202ENST00000439984 ACBD6Q9BR61 282 aa13.96□□□□□ -0.17
PCNX1-202ENST00000439984 SOCS7O14512 581 aa13.96□□□□□ -0.17
PCNX1-202ENST00000439984 LAMP1P11279 417 aa13.96□□□□□ -0.17
PCNX1-202ENST00000439984 ACADMP11310 421 aa13.96□□□□□ -0.17
PCNX1-202ENST00000439984 PPM1AP35813 382 aa13.96□□□□□ -0.17
PCNX1-202ENST00000439984 IDH3GP51553 393 aaPredicted RBP13.96□□□□□ -0.17
PCNX1-202ENST00000439984 CMIPQ8IY22 773 aa13.96□□□□□ -0.17
PCNX1-202ENST00000439984 LMLNQ96KR4 655 aa13.96□□□□□ -0.17
PCNX1-202ENST00000439984 VRK1Q99986 396 aaPredicted RBP13.96□□□□□ -0.17
PCNX1-202ENST00000439984 RCE1Q9Y256 329 aa13.96□□□□□ -0.17
PCNX1-202ENST00000439984 STYXL1Q9Y6J8 313 aa13.96□□□□□ -0.17
PCNX1-202ENST00000439984 TRAV18A0A075B6X5 111 aa13.96□□□□□ -0.18
PCNX1-202ENST00000439984 CSNK2A2P19784 350 aaPredicted RBP13.96□□□□□ -0.18
PCNX1-202ENST00000439984 UQCRC2P22695 453 aa13.96□□□□□ -0.18
PCNX1-202ENST00000439984 CARD16Q5EG05 197 aa13.96□□□□□ -0.18
PCNX1-202ENST00000439984 DNAJC22Q8N4W6 341 aa13.96□□□□□ -0.18
PCNX1-202ENST00000439984 CELF5Q8N6W0 485 aaKnown RBP13.96□□□□□ -0.18
PCNX1-202ENST00000439984 SNIP1Q8TAD8 396 aaKnown RBP13.96□□□□□ -0.18
PCNX1-202ENST00000439984 SLC25A44Q96H78 314 aaPredicted RBP13.96□□□□□ -0.18
PCNX1-202ENST00000439984 RNF32Q9H0A6 362 aa13.96□□□□□ -0.18
PCNX1-202ENST00000439984 N4BP2Q86UW6 1770 aaPredicted RBP13.96□□□□□ -0.18
PCNX1-202ENST00000439984 ZNF487B1APH4 448 aa13.95□□□□□ -0.18
PCNX1-202ENST00000439984 OR7A17O14581 309 aa13.95□□□□□ -0.18
PCNX1-202ENST00000439984 ADAP00813 363 aa13.95□□□□□ -0.18
PCNX1-202ENST00000439984 CATSPEREQ5SY80 951 aa13.95□□□□□ -0.18
PCNX1-202ENST00000439984 OR52P1PQ8NH57 321 aa13.95□□□□□ -0.18
PCNX1-202ENST00000439984 ACOT11Q8WXI4 607 aaPredicted RBP13.95□□□□□ -0.18
PCNX1-202ENST00000439984 ELP4Q96EB1 424 aa13.95□□□□□ -0.18
PCNX1-202ENST00000439984 C12orf42Q96LP6 360 aa13.95□□□□□ -0.18
PCNX1-202ENST00000439984 EFCAB11Q9BUY7 163 aa13.95□□□□□ -0.18
PCNX1-202ENST00000439984 CYP8B1Q9UNU6 501 aa13.95□□□□□ -0.18
PCNX1-202ENST00000439984 PCDHA9Q9Y5H5 950 aa13.95□□□□□ -0.18
PCNX1-202ENST00000439984 CFAP20Q9Y6A4 193 aaKnown RBP13.95□□□□□ -0.18
PCNX1-202ENST00000439984 TBC1D3BA6NDS4 549 aa13.95□□□□□ -0.18
PCNX1-202ENST00000439984 PI15O43692 258 aa13.95□□□□□ -0.18
PCNX1-202ENST00000439984 FLI1Q01543 452 aaPredicted RBP13.95□□□□□ -0.18
PCNX1-202ENST00000439984 SLAMF1Q13291 335 aa13.95□□□□□ -0.18
PCNX1-202ENST00000439984 FCRLBQ6BAA4 426 aa13.95□□□□□ -0.18
PCNX1-202ENST00000439984 AGTRAPQ6RW13 159 aa13.95□□□□□ -0.18
PCNX1-202ENST00000439984 LSMEM2Q8N112 164 aa13.95□□□□□ -0.18
PCNX1-202ENST00000439984 NPWQ8N729 165 aa13.95□□□□□ -0.18
PCNX1-202ENST00000439984 OR6N2Q8NGY6 317 aa13.95□□□□□ -0.18
PCNX1-202ENST00000439984 NPLOC4Q8TAT6 608 aa13.95□□□□□ -0.18
PCNX1-202ENST00000439984 DPYSL5Q9BPU6 564 aa13.95□□□□□ -0.18
PCNX1-202ENST00000439984 XYLT2Q9H1B5 865 aa13.95□□□□□ -0.18
PCNX1-202ENST00000439984 AHSA1O95433 338 aa13.95□□□□□ -0.18
PCNX1-202ENST00000439984 IL1AP01583 271 aa13.95□□□□□ -0.18
PCNX1-202ENST00000439984 PCCBP05166 539 aa13.95□□□□□ -0.18
PCNX1-202ENST00000439984 MMP12P39900 470 aa13.95□□□□□ -0.18
PCNX1-202ENST00000439984 ADARB1P78563 741 aaKnown RBP13.95□□□□□ -0.18
PCNX1-202ENST00000439984 SLC25A18Q9H1K4 315 aa13.95□□□□□ -0.18
PCNX1-202ENST00000439984 ERVW-1Q9UQF0 538 aa13.95□□□□□ -0.18
PCNX1-202ENST00000439984 SLC33A1O00400 549 aaPredicted RBP13.95□□□□□ -0.18
PCNX1-202ENST00000439984 OR8U9P0C7N5 309 aa13.95□□□□□ -0.18
PCNX1-202ENST00000439984 PCBP1Q15365 356 aaKnown RBP eCLIP13.95□□□□□ -0.18
PCNX1-202ENST00000439984 PSAPL1Q6NUJ1 521 aa13.95□□□□□ -0.18
PCNX1-202ENST00000439984 PSD2Q9BQI7 771 aa13.95□□□□□ -0.18
PCNX1-202ENST00000439984 OR2AG1Q9H205 316 aa13.95□□□□□ -0.18
PCNX1-202ENST00000439984 NEUROD4Q9HD90 331 aa13.95□□□□□ -0.18
PCNX1-202ENST00000439984 TXNL4BQ9NX01 149 aaKnown RBP13.95□□□□□ -0.18
PCNX1-202ENST00000439984 NUMBLQ9Y6R0 609 aa13.95□□□□□ -0.18
PCNX1-202ENST00000439984 MYO5AQ9Y4I1 1855 aaKnown RBP13.95□□□□□ -0.18
PCNX1-202ENST00000439984 CD68P34810 354 aaPredicted RBP13.95□□□□□ -0.18
PCNX1-202ENST00000439984 GALK2Q01415 458 aa13.95□□□□□ -0.18
PCNX1-202ENST00000439984 APOOLQ6UXV4 268 aa13.95□□□□□ -0.18
PCNX1-202ENST00000439984 PXT1Q8NFP0 134 aa13.95□□□□□ -0.18
PCNX1-202ENST00000439984 LMF1Q96S06 567 aa13.95□□□□□ -0.18
PCNX1-202ENST00000439984 SLC43A1O75387 559 aa13.95□□□□□ -0.18
PCNX1-202ENST00000439984 CSKP41240 450 aa13.95□□□□□ -0.18
PCNX1-202ENST00000439984 AKR1C2P52895 323 aa13.95□□□□□ -0.18
PCNX1-202ENST00000439984 AKR1C1Q04828 323 aa13.95□□□□□ -0.18
PCNX1-202ENST00000439984 AQP6Q13520 282 aa13.95□□□□□ -0.18
PCNX1-202ENST00000439984 DPPA2Q7Z7J5 298 aa13.95□□□□□ -0.18
PCNX1-202ENST00000439984 OSTM1Q86WC4 334 aa13.95□□□□□ -0.18
PCNX1-202ENST00000439984 APIPQ96GX9 242 aa13.95□□□□□ -0.18
PCNX1-202ENST00000439984 MSLNLQ96KJ4 702 aa13.95□□□□□ -0.18
PCNX1-202ENST00000439984 NKX6-2Q9C056 277 aaPredicted RBP13.95□□□□□ -0.18
PCNX1-202ENST00000439984 PLAGL1Q9UM63 463 aa13.95□□□□□ -0.18
PCNX1-202ENST00000439984 SIPA1L3O60292 1781 aaPredicted RBP13.94□□□□□ -0.18
PCNX1-202ENST00000439984 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.94□□□□□ -0.18
PCNX1-202ENST00000439984 DUXAA6NLW8 204 aa13.94□□□□□ -0.18
PCNX1-202ENST00000439984 ANHXE9PGG2 379 aa13.94□□□□□ -0.18
PCNX1-202ENST00000439984 SLC6A6P31641 620 aa13.94□□□□□ -0.18
PCNX1-202ENST00000439984 CCR6P51684 374 aa13.94□□□□□ -0.18
PCNX1-202ENST00000439984 TAP2Q03519 686 aa13.94□□□□□ -0.18
PCNX1-202ENST00000439984 ANKRD53Q8N9V6 530 aa13.94□□□□□ -0.18
PCNX1-202ENST00000439984 OR4K5Q8NGD3 323 aa13.94□□□□□ -0.18
PCNX1-202ENST00000439984 KCNJ16Q9NPI9 418 aa13.94□□□□□ -0.18
PCNX1-202ENST00000439984 ERI3O43414 337 aaKnown RBP13.94□□□□□ -0.18
PCNX1-202ENST00000439984 AMD1P17707 334 aa13.94□□□□□ -0.18
PCNX1-202ENST00000439984 CTU2Q2VPK5 515 aaKnown RBP13.94□□□□□ -0.18
PCNX1-202ENST00000439984 SYT6Q5T7P8 510 aaPredicted RBP13.94□□□□□ -0.18
PCNX1-202ENST00000439984 PCSK9Q8NBP7 692 aaKnown RBP13.94□□□□□ -0.18
PCNX1-202ENST00000439984 RGMAQ96B86 450 aa13.94□□□□□ -0.18
PCNX1-202ENST00000439984 MAOAP21397 527 aa13.94□□□□□ -0.18
PCNX1-202ENST00000439984 MAGEB1P43366 347 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms