RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 OR6C2Q9NZP2 312 aa8.55□□□□□ -1.04
COPB1-202ENST00000439561 CXXC1Q9P0U4 656 aaPredicted RBP8.55□□□□□ -1.04
COPB1-202ENST00000439561 FBXO9Q9UK97 447 aaPredicted RBP8.55□□□□□ -1.04
COPB1-202ENST00000439561 RABL2BQ9UNT1 228 aa8.55□□□□□ -1.04
COPB1-202ENST00000439561 PCDHGB7Q9Y5F8 929 aa8.55□□□□□ -1.04
COPB1-202ENST00000439561 CACNG2Q9Y698 323 aa8.55□□□□□ -1.04
COPB1-202ENST00000439561 BRCA1P38398 1863 aaKnown RBP8.55□□□□□ -1.04
COPB1-202ENST00000439561 A0A1W2PRG6 482 aa8.55□□□□□ -1.04
COPB1-202ENST00000439561 SLC16A5O15375 505 aa8.55□□□□□ -1.04
COPB1-202ENST00000439561 MMP20O60882 483 aa8.55□□□□□ -1.04
COPB1-202ENST00000439561 GATBO75879 557 aaKnown RBP8.55□□□□□ -1.04
COPB1-202ENST00000439561 NTN1O95631 604 aa8.55□□□□□ -1.04
COPB1-202ENST00000439561 ALDH1A1P00352 501 aa8.55□□□□□ -1.04
COPB1-202ENST00000439561 GALTP07902 379 aa8.55□□□□□ -1.04
COPB1-202ENST00000439561 PRKAR2AP13861 404 aaKnown RBP8.55□□□□□ -1.04
COPB1-202ENST00000439561 SHC1P29353 583 aa8.55□□□□□ -1.04
COPB1-202ENST00000439561 NTSP30990 170 aa8.55□□□□□ -1.04
COPB1-202ENST00000439561 SLC1A3P43003 542 aa8.55□□□□□ -1.04
COPB1-202ENST00000439561 EVX1P49640 407 aa8.55□□□□□ -1.04
COPB1-202ENST00000439561 ZBTB37Q5TC79 503 aa8.55□□□□□ -1.04
COPB1-202ENST00000439561 GARNL3Q5VVW2 1013 aa8.55□□□□□ -1.04
COPB1-202ENST00000439561 CEACAM19Q7Z692 300 aa8.55□□□□□ -1.04
COPB1-202ENST00000439561 RNF180Q86T96 592 aa8.55□□□□□ -1.04
COPB1-202ENST00000439561 CBARPQ8N350 705 aaPredicted RBP8.55□□□□□ -1.04
COPB1-202ENST00000439561 TMEM163Q8TC26 289 aa8.55□□□□□ -1.04
COPB1-202ENST00000439561 DOK4Q8TEW6 326 aa8.55□□□□□ -1.04
COPB1-202ENST00000439561 SMPDL3AQ92484 453 aa8.55□□□□□ -1.04
COPB1-202ENST00000439561 ZNF354BQ96LW1 612 aa8.55□□□□□ -1.04
COPB1-202ENST00000439561 ERMAPQ96PL5 475 aaPredicted RBP8.55□□□□□ -1.04
COPB1-202ENST00000439561 PLA2G12AQ9BZM1 189 aa8.55□□□□□ -1.04
COPB1-202ENST00000439561 ZCCHC2Q9C0B9 1178 aaKnown RBP8.55□□□□□ -1.04
COPB1-202ENST00000439561 BTBD1Q9H0C5 482 aa8.55□□□□□ -1.04
COPB1-202ENST00000439561 TMEM38AQ9H6F2 299 aa8.55□□□□□ -1.04
COPB1-202ENST00000439561 MRPL17Q9NRX2 175 aaKnown RBP8.55□□□□□ -1.04
COPB1-202ENST00000439561 SH2B3Q9UQQ2 575 aa8.55□□□□□ -1.04
COPB1-202ENST00000439561 Q9Y3F1 56 aa8.55□□□□□ -1.04
COPB1-202ENST00000439561 MAB21L2Q9Y586 359 aa8.55□□□□□ -1.04
COPB1-202ENST00000439561 MYO7AQ13402 2215 aa8.55□□□□□ -1.04
COPB1-202ENST00000439561 LOC105371267A0A1B0GV96 52 aa8.55□□□□□ -1.04
COPB1-202ENST00000439561 ATP6V1G2-DDX39BF2Z307 99 aa8.55□□□□□ -1.04
COPB1-202ENST00000439561 GFYI3L273 518 aa8.55□□□□□ -1.04
COPB1-202ENST00000439561 UGDHO60701 494 aa8.55□□□□□ -1.04
COPB1-202ENST00000439561 KHDRBS3O75525 346 aaKnown RBP8.55□□□□□ -1.04
COPB1-202ENST00000439561 RPLP2P05387 115 aaKnown RBP8.55□□□□□ -1.04
COPB1-202ENST00000439561 ACP2P11117 423 aa8.55□□□□□ -1.04
COPB1-202ENST00000439561 PRPH2P23942 346 aa8.55□□□□□ -1.04
COPB1-202ENST00000439561 LCN1P31025 176 aa8.55□□□□□ -1.04
COPB1-202ENST00000439561 AHRP35869 848 aa8.55□□□□□ -1.04
COPB1-202ENST00000439561 GPR1P46091 355 aa8.55□□□□□ -1.04
COPB1-202ENST00000439561 MAZP56270 477 aaKnown RBP8.55□□□□□ -1.04
COPB1-202ENST00000439561 RGS1Q08116 209 aa8.55□□□□□ -1.04
COPB1-202ENST00000439561 MPPE1Q53F39 396 aa8.55□□□□□ -1.04
COPB1-202ENST00000439561 ZNF311Q5JNZ3 666 aa8.55□□□□□ -1.04
COPB1-202ENST00000439561 PRAMEF14Q5SWL7 426 aa8.55□□□□□ -1.04
COPB1-202ENST00000439561 PRAMEF13Q5VWM6 474 aa8.55□□□□□ -1.04
COPB1-202ENST00000439561 LYPD4Q6UWN0 246 aa8.55□□□□□ -1.04
COPB1-202ENST00000439561 WASH2PQ6VEQ5 465 aa8.55□□□□□ -1.04
COPB1-202ENST00000439561 SLCO4C1Q6ZQN7 724 aa8.55□□□□□ -1.04
COPB1-202ENST00000439561 IDO2Q6ZQW0 420 aa8.55□□□□□ -1.04
COPB1-202ENST00000439561 ESPNLQ6ZVH7 1005 aa8.55□□□□□ -1.04
COPB1-202ENST00000439561 TECPR1Q7Z6L1 1165 aa8.55□□□□□ -1.04
COPB1-202ENST00000439561 GRAMD2AQ8IUY3 354 aa8.55□□□□□ -1.04
COPB1-202ENST00000439561 CPOQ8IVL8 374 aa8.55□□□□□ -1.04
COPB1-202ENST00000439561 GPR135Q8IZ08 494 aa8.55□□□□□ -1.04
COPB1-202ENST00000439561 SRFBP1Q8NEF9 429 aaKnown RBP8.55□□□□□ -1.04
COPB1-202ENST00000439561 GPR32P1Q8NGA4 272 aa8.55□□□□□ -1.04
COPB1-202ENST00000439561 OR6T1Q8NGN1 323 aa8.55□□□□□ -1.04
COPB1-202ENST00000439561 OR8K5Q8NH50 307 aa8.55□□□□□ -1.04
COPB1-202ENST00000439561 TRMT10AQ8TBZ6 339 aaKnown RBP8.55□□□□□ -1.04
COPB1-202ENST00000439561 UBE2E3Q969T4 207 aa8.55□□□□□ -1.04
COPB1-202ENST00000439561 RAD51AP1Q96B01 352 aa8.55□□□□□ -1.04
COPB1-202ENST00000439561 COQ10AQ96MF6 247 aa8.55□□□□□ -1.04
COPB1-202ENST00000439561 SLC6A18Q96N87 628 aa8.55□□□□□ -1.04
COPB1-202ENST00000439561 MACROD1Q9BQ69 325 aa8.55□□□□□ -1.04
COPB1-202ENST00000439561 C17orf62Q9BQA9 187 aa8.55□□□□□ -1.04
COPB1-202ENST00000439561 FUZQ9BT04 418 aa8.55□□□□□ -1.04
COPB1-202ENST00000439561 SPATA5L1Q9BVQ7 753 aa8.55□□□□□ -1.04
COPB1-202ENST00000439561 KLF16Q9BXK1 252 aaPredicted RBP8.55□□□□□ -1.04
COPB1-202ENST00000439561 GSDMCQ9BYG8 508 aa8.55□□□□□ -1.04
COPB1-202ENST00000439561 SPNS1Q9H2V7 528 aa8.55□□□□□ -1.04
COPB1-202ENST00000439561 MED20Q9H944 212 aa8.55□□□□□ -1.04
COPB1-202ENST00000439561 SLC25A19Q9HC21 320 aa8.55□□□□□ -1.04
COPB1-202ENST00000439561 ZC3H12DA2A288 527 aaKnown RBP8.54□□□□□ -1.04
COPB1-202ENST00000439561 H7BY64 318 aa8.54□□□□□ -1.04
COPB1-202ENST00000439561 SCAMP1O15126 338 aa8.54□□□□□ -1.04
COPB1-202ENST00000439561 SLC19A2O60779 497 aa8.54□□□□□ -1.04
COPB1-202ENST00000439561 ZNF821O75541 412 aaPredicted RBP8.54□□□□□ -1.04
COPB1-202ENST00000439561 PROS1P07225 676 aa8.54□□□□□ -1.04
COPB1-202ENST00000439561 CCND3P30281 292 aaPredicted RBP8.54□□□□□ -1.04
COPB1-202ENST00000439561 TEKQ02763 1124 aa8.54□□□□□ -1.04
COPB1-202ENST00000439561 RAB40BQ12829 278 aa8.54□□□□□ -1.04
COPB1-202ENST00000439561 RALGAPA2Q2PPJ7 1873 aa8.54□□□□□ -1.04
COPB1-202ENST00000439561 FCRLBQ6BAA4 426 aa8.54□□□□□ -1.04
COPB1-202ENST00000439561 SLC25A25Q6KCM7 469 aa8.54□□□□□ -1.04
COPB1-202ENST00000439561 PLBD1Q6P4A8 553 aa8.54□□□□□ -1.04
COPB1-202ENST00000439561 ZNF613Q6PF04 617 aa8.54□□□□□ -1.04
COPB1-202ENST00000439561 KANSL1Q7Z3B3 1105 aa8.54□□□□□ -1.04
COPB1-202ENST00000439561 RASGEF1AQ8N9B8 481 aa8.54□□□□□ -1.04
COPB1-202ENST00000439561 PCSK9Q8NBP7 692 aaKnown RBP8.54□□□□□ -1.04
COPB1-202ENST00000439561 MSLNLQ96KJ4 702 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms