RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 GRIK2Q13002 908 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 STX5Q13190 355 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 FASTKD3Q14CZ7 662 aaKnown RBP3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 NPTX1Q15818 432 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 RBBP7Q16576 425 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 CYP1B1Q16678 543 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 MEP1AQ16819 746 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 ZSWIM7Q19AV6 140 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 ZNF260Q3ZCT1 412 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 ESCO2Q56NI9 601 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 COQ5Q5HYK3 327 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 LGSNQ5TDP6 509 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 SLC22A10Q63ZE4 541 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 KIAA0895LQ68EN5 471 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 RGMBQ6NW40 437 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 H3F3CQ6NXT2 135 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 FAM151BQ6UXP7 276 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 TMPRSS11FQ6ZWK6 438 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 CENPUQ71F23 418 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 G2E3Q7L622 706 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 SLC26A11Q86WA9 606 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 SERPINA9Q86WD7 417 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 CCDC25Q86WR0 208 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 RNF130Q86XS8 419 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 KMT5CQ86Y97 462 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 TBC1D10CQ8IV04 446 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 PLD3Q8IV08 490 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 DCUN1D3Q8IWE4 304 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 ADGRG5Q8IZF4 528 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 MCOLN2Q8IZK6 566 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 SLC38A6Q8IZM9 456 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 MUC20Q8N307 709 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 PARP8Q8N3A8 854 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 LIX1Q8N485 282 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 ARFGAP1Q8N6T3 406 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 BEST2Q8NFU1 509 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 SEMA6DQ8NFY4 1073 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 OR5M1Q8NGP8 315 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 OR9G4Q8NGQ1 327 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 IRGQQ8WZA9 623 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 GTF2H4Q92759 462 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 PROX1Q92786 737 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 RAD51AP1Q96B01 352 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 TMEM45BQ96B21 275 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 FAM136AQ96C01 138 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 CCDC124Q96CT7 223 aaKnown RBP3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 HPDLQ96IR7 371 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 PGBD1Q96JS3 809 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 GLT1D1Q96MS3 346 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 VSTM2LQ96N03 204 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 ZNF570Q96NI8 536 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 TGM7Q96PF1 710 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 PRR25Q96S07 402 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 OSBPL9Q96SU4 736 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 MMS19Q96T76 1030 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 RIT2Q99578 217 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 LMF2Q9BU23 707 aaKnown RBP3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 IFT27Q9BW83 186 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 SLA2Q9H6Q3 261 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 SMYD3Q9H7B4 428 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 METTL8Q9H825 291 aaKnown RBP3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 FOLH1BQ9HBA9 442 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 CD209Q9NNX6 404 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 IMP3Q9NV31 184 aaKnown RBP3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 NLGN3Q9NZ94 848 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 BCAP29Q9UHQ4 241 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 RPH3ALQ9UNE2 315 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 KPTNQ9Y664 436 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 GRIN2DO15399 1336 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 MAP3K15Q6ZN16 1313 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 ATP10DQ9P241 1426 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 UMODL1Q5DID0 1318 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 A0A0A6YYH2 397 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 A0A0G2JLW4 131 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 A0A1W2PPE3 182 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 SMCO3A2RU48 225 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 TYW5A2RUC4 315 aaKnown RBP3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 FABP12A6NFH5 140 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 TMEM202A6NGA9 273 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 A6NJ64 397 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 A8MU76 341 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 A8MUA0 341 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 BTBD19C9JJ37 291 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 F5H697 171 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 SMLR1H3BR10 107 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 J3QR06 171 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 M0QZ24 198 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 PGRMC1O00264 195 aaKnown RBP3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 CLDN5O00501 218 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 TOX3O15405 576 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 LATO43561 262 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 LDB3O75112 727 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 NDUFA7O95182 113 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 SERPIND1P05546 499 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 F7P08709 466 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 CTXN2P0C2S0 81 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 TRIM49P0CI25 452 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 TRIM49CP0CI26 452 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 HSMCR30P0CW71 290 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 CYP2D6P10635 497 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms