RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 HMBOX1Q6NT76 420 aa12.84□□□□□ -0.35
LINC01088-201ENST00000437737 SLCO4C1Q6ZQN7 724 aa12.84□□□□□ -0.35
LINC01088-201ENST00000437737 SLC29A4Q7RTT9 530 aa12.84□□□□□ -0.35
LINC01088-201ENST00000437737 OR4N5Q8IXE1 308 aa12.84□□□□□ -0.35
LINC01088-201ENST00000437737 PHC2Q8IXK0 858 aa12.84□□□□□ -0.35
LINC01088-201ENST00000437737 CCNYL1Q8N7R7 359 aa12.84□□□□□ -0.35
LINC01088-201ENST00000437737 C7orf57Q8NEG2 295 aa12.84□□□□□ -0.35
LINC01088-201ENST00000437737 OR6Y1Q8NGX8 325 aa12.84□□□□□ -0.35
LINC01088-201ENST00000437737 ABTB1Q969K4 478 aaPredicted RBP12.84□□□□□ -0.35
LINC01088-201ENST00000437737 PIK3IP1Q96FE7 263 aa12.84□□□□□ -0.35
LINC01088-201ENST00000437737 WDYHV1Q96HA8 205 aa12.84□□□□□ -0.35
LINC01088-201ENST00000437737 MAPKAP1Q9BPZ7 522 aa12.84□□□□□ -0.35
LINC01088-201ENST00000437737 C1QTNF3Q9BXJ4 246 aa12.84□□□□□ -0.35
LINC01088-201ENST00000437737 LYRM4Q9HD34 91 aa12.84□□□□□ -0.35
LINC01088-201ENST00000437737 WWOXQ9NZC7 414 aa12.84□□□□□ -0.35
LINC01088-201ENST00000437737 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.84□□□□□ -0.35
LINC01088-201ENST00000437737 TESMINQ9Y4I5 508 aa12.84□□□□□ -0.35
LINC01088-201ENST00000437737 HEATR5AQ86XA9 2040 aa12.83□□□□□ -0.36
LINC01088-201ENST00000437737 NCF1BA6NI72 391 aaPredicted RBP12.83□□□□□ -0.36
LINC01088-201ENST00000437737 NCF1CA8MVU1 366 aaPredicted RBP12.83□□□□□ -0.36
LINC01088-201ENST00000437737 HRKO00198 91 aa12.83□□□□□ -0.36
LINC01088-201ENST00000437737 TP53I11O14683 189 aa12.83□□□□□ -0.36
LINC01088-201ENST00000437737 SUPT7LO94864 414 aa12.83□□□□□ -0.36
LINC01088-201ENST00000437737 HSPA4LO95757 839 aa12.83□□□□□ -0.36
LINC01088-201ENST00000437737 IGKV3-11P04433 115 aa12.83□□□□□ -0.36
LINC01088-201ENST00000437737 CYP4B1P13584 511 aa12.83□□□□□ -0.36
LINC01088-201ENST00000437737 NCF1P14598 390 aaPredicted RBP12.83□□□□□ -0.36
LINC01088-201ENST00000437737 CPN2P22792 545 aa12.83□□□□□ -0.36
LINC01088-201ENST00000437737 GDF5P43026 501 aa12.83□□□□□ -0.36
LINC01088-201ENST00000437737 SLC1A6P48664 564 aa12.83□□□□□ -0.36
LINC01088-201ENST00000437737 DIO3P55073 304 aa12.83□□□□□ -0.36
LINC01088-201ENST00000437737 ABCE1P61221 599 aaKnown RBP12.83□□□□□ -0.36
LINC01088-201ENST00000437737 CBX1P83916 185 aa12.83□□□□□ -0.36
LINC01088-201ENST00000437737 NTRK2Q16620 822 aa12.83□□□□□ -0.36
LINC01088-201ENST00000437737 EIPR1Q53HC9 387 aa12.83□□□□□ -0.36
LINC01088-201ENST00000437737 NHSL2Q5HYW2 709 aa12.83□□□□□ -0.36
LINC01088-201ENST00000437737 WIPI1Q5MNZ9 446 aaPredicted RBP12.83□□□□□ -0.36
LINC01088-201ENST00000437737 ZNF678Q5SXM1 525 aa12.83□□□□□ -0.36
LINC01088-201ENST00000437737 TTC19Q6DKK2 380 aaPredicted RBP12.83□□□□□ -0.36
LINC01088-201ENST00000437737 ADNP2Q6IQ32 1131 aa12.83□□□□□ -0.36
LINC01088-201ENST00000437737 CPLX4Q7Z7G2 160 aa12.83□□□□□ -0.36
LINC01088-201ENST00000437737 DOK4Q8TEW6 326 aa12.83□□□□□ -0.36
LINC01088-201ENST00000437737 UBTD2Q8WUN7 234 aa12.83□□□□□ -0.36
LINC01088-201ENST00000437737 ANKRD9Q96BM1 317 aaPredicted RBP12.83□□□□□ -0.36
LINC01088-201ENST00000437737 PPWD1Q96BP3 646 aaKnown RBP12.83□□□□□ -0.36
LINC01088-201ENST00000437737 INTS12Q96CB8 462 aaKnown RBP12.83□□□□□ -0.36
LINC01088-201ENST00000437737 RHBDF1Q96CC6 855 aa12.83□□□□□ -0.36
LINC01088-201ENST00000437737 NTNG2Q96CW9 530 aa12.83□□□□□ -0.36
LINC01088-201ENST00000437737 RBM18Q96H35 190 aaKnown RBP12.83□□□□□ -0.36
LINC01088-201ENST00000437737 C7orf26Q96N11 449 aa12.83□□□□□ -0.36
LINC01088-201ENST00000437737 RILPQ96NA2 401 aa12.83□□□□□ -0.36
LINC01088-201ENST00000437737 ZFP3Q96NJ6 502 aa12.83□□□□□ -0.36
LINC01088-201ENST00000437737 KCNC2Q96PR1 638 aa12.83□□□□□ -0.36
LINC01088-201ENST00000437737 F2RL3Q96RI0 385 aa12.83□□□□□ -0.36
LINC01088-201ENST00000437737 GATA5Q9BWX5 397 aaPredicted RBP12.83□□□□□ -0.36
LINC01088-201ENST00000437737 CD244Q9BZW8 370 aa12.83□□□□□ -0.36
LINC01088-201ENST00000437737 ROGDIQ9GZN7 287 aa12.83□□□□□ -0.36
LINC01088-201ENST00000437737 NT5DC2Q9H857 520 aa12.83□□□□□ -0.36
LINC01088-201ENST00000437737 PRDM7Q9NQW5 492 aa12.83□□□□□ -0.36
LINC01088-201ENST00000437737 C15orf41Q9Y2V0 281 aa12.83□□□□□ -0.36
LINC01088-201ENST00000437737 ANGPTL3Q9Y5C1 460 aa12.83□□□□□ -0.36
LINC01088-201ENST00000437737 NPFFR2Q9Y5X5 522 aa12.83□□□□□ -0.36
LINC01088-201ENST00000437737 MED12LQ86YW9 2145 aa12.82□□□□□ -0.36
LINC01088-201ENST00000437737 ANKRD33BA6NCL7 494 aa12.82□□□□□ -0.36
LINC01088-201ENST00000437737 FGF17O60258 216 aa12.82□□□□□ -0.36
LINC01088-201ENST00000437737 SNNO75324 88 aaPredicted RBP12.82□□□□□ -0.36
LINC01088-201ENST00000437737 STK16O75716 305 aa12.82□□□□□ -0.36
LINC01088-201ENST00000437737 SNX4O95219 450 aa12.82□□□□□ -0.36
LINC01088-201ENST00000437737 TBX6O95947 436 aaPredicted RBP12.82□□□□□ -0.36
LINC01088-201ENST00000437737 GCKP35557 465 aa12.82□□□□□ -0.36
LINC01088-201ENST00000437737 PTH2RP49190 550 aa12.82□□□□□ -0.36
LINC01088-201ENST00000437737 ERVK-8P63133 956 aa12.82□□□□□ -0.36
LINC01088-201ENST00000437737 PLIN5Q00G26 463 aa12.82□□□□□ -0.36
LINC01088-201ENST00000437737 BST1Q10588 318 aa12.82□□□□□ -0.36
LINC01088-201ENST00000437737 RPS6KA2Q15349 733 aa12.82□□□□□ -0.36
LINC01088-201ENST00000437737 BICRALQ6AI39 1079 aa12.82□□□□□ -0.36
LINC01088-201ENST00000437737 RNF111Q6ZNA4 994 aa12.82□□□□□ -0.36
LINC01088-201ENST00000437737 C20orf204Q6ZNR8 217 aa12.82□□□□□ -0.36
LINC01088-201ENST00000437737 DGAT2L6Q6ZPD8 337 aa12.82□□□□□ -0.36
LINC01088-201ENST00000437737 VN1R5Q7Z5H4 357 aa12.82□□□□□ -0.36
LINC01088-201ENST00000437737 PACS2Q86VP3 889 aa12.82□□□□□ -0.36
LINC01088-201ENST00000437737 TAGAPQ8N103 731 aa12.82□□□□□ -0.36
LINC01088-201ENST00000437737 ZNF441Q8N8Z8 693 aa12.82□□□□□ -0.36
LINC01088-201ENST00000437737 ZPLD1Q8TCW7 415 aa12.82□□□□□ -0.36
LINC01088-201ENST00000437737 FBXL20Q96IG2 436 aa12.82□□□□□ -0.36
LINC01088-201ENST00000437737 GNRHR2Q96P88 292 aa12.82□□□□□ -0.36
LINC01088-201ENST00000437737 ZNF317Q96PQ6 595 aaPredicted RBP12.82□□□□□ -0.36
LINC01088-201ENST00000437737 TM9SF2Q99805 663 aa12.82□□□□□ -0.36
LINC01088-201ENST00000437737 GSX2Q9BZM3 304 aa12.82□□□□□ -0.36
LINC01088-201ENST00000437737 WWTR1Q9GZV5 400 aa12.82□□□□□ -0.36
LINC01088-201ENST00000437737 UBQLN3Q9H347 655 aa12.82□□□□□ -0.36
LINC01088-201ENST00000437737 PIGMQ9H3S5 423 aa12.82□□□□□ -0.36
LINC01088-201ENST00000437737 KLHL28Q9NXS3 571 aa12.82□□□□□ -0.36
LINC01088-201ENST00000437737 ZNF226Q9NYT6 803 aa12.82□□□□□ -0.36
LINC01088-201ENST00000437737 OPTCQ9UBM4 332 aa12.82□□□□□ -0.36
LINC01088-201ENST00000437737 ERVK-19Q9WJR5 959 aa12.82□□□□□ -0.36
LINC01088-201ENST00000437737 MXRA5Q9NR99 2828 aa12.81□□□□□ -0.36
LINC01088-201ENST00000437737 CAPN14A8MX76 684 aa12.81□□□□□ -0.36
LINC01088-201ENST00000437737 DEFB108AA8MXU0 73 aa12.81□□□□□ -0.36
LINC01088-201ENST00000437737 SLCO1B7G3V0H7 640 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms