RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 EHD3Q9NZN3 535 aa5.32□□□□□ -1.56
HMGB3P24-201ENST00000433260 SEC14L3Q9UDX4 400 aa5.32□□□□□ -1.56
HMGB3P24-201ENST00000433260 MARCOQ9UEW3 520 aaPredicted RBP5.32□□□□□ -1.56
HMGB3P24-201ENST00000433260 ZNF639Q9UID6 485 aa5.32□□□□□ -1.56
HMGB3P24-201ENST00000433260 SH3BGRL2Q9UJC5 107 aa5.32□□□□□ -1.56
HMGB3P24-201ENST00000433260 EIF3LQ9Y262 564 aaKnown RBP5.32□□□□□ -1.56
HMGB3P24-201ENST00000433260 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.32□□□□□ -1.56
HMGB3P24-201ENST00000433260 KLF13Q9Y2Y9 288 aaPredicted RBP5.32□□□□□ -1.56
HMGB3P24-201ENST00000433260 NPFFR2Q9Y5X5 522 aa5.32□□□□□ -1.56
HMGB3P24-201ENST00000433260 COL6A6A6NMZ7 2263 aa5.32□□□□□ -1.56
HMGB3P24-201ENST00000433260 SHANK1Q9Y566 2161 aa5.32□□□□□ -1.56
HMGB3P24-201ENST00000433260 LAMA5O15230 3695 aa5.32□□□□□ -1.56
HMGB3P24-201ENST00000433260 NINQ8N4C6 2090 aa5.32□□□□□ -1.56
HMGB3P24-201ENST00000433260 MGAQ8IWI9 3026 aa5.31□□□□□ -1.56
HMGB3P24-201ENST00000433260 CACNA1GO43497 2377 aa5.31□□□□□ -1.56
HMGB3P24-201ENST00000433260 IGSF10Q6WRI0 2623 aa5.31□□□□□ -1.56
HMGB3P24-201ENST00000433260 ITPR1Q14643 2758 aa5.31□□□□□ -1.56
HMGB3P24-201ENST00000433260 TRGV8A0A0C4DH27 118 aa5.31□□□□□ -1.56
HMGB3P24-201ENST00000433260 A0A0G2JMM0 328 aa5.31□□□□□ -1.56
HMGB3P24-201ENST00000433260 A0A1W2PPB8 328 aa5.31□□□□□ -1.56
HMGB3P24-201ENST00000433260 A0A1W2PRS3 328 aa5.31□□□□□ -1.56
HMGB3P24-201ENST00000433260 OR6C76A6NM76 312 aa5.31□□□□□ -1.56
HMGB3P24-201ENST00000433260 KIR3DP1A8MWS1 328 aa5.31□□□□□ -1.56
HMGB3P24-201ENST00000433260 CFLARO15519 480 aa5.31□□□□□ -1.56
HMGB3P24-201ENST00000433260 PDPK1O15530 556 aa5.31□□□□□ -1.56
HMGB3P24-201ENST00000433260 LRRTM2O43300 516 aa5.31□□□□□ -1.56
HMGB3P24-201ENST00000433260 ASNA1O43681 348 aa5.31□□□□□ -1.56
HMGB3P24-201ENST00000433260 REM1O75628 298 aa5.31□□□□□ -1.56
HMGB3P24-201ENST00000433260 BCAS2O75934 225 aaPredicted RBP5.31□□□□□ -1.56
HMGB3P24-201ENST00000433260 AGFG2O95081 481 aa5.31□□□□□ -1.56
HMGB3P24-201ENST00000433260 CBX7O95931 251 aa5.31□□□□□ -1.56
HMGB3P24-201ENST00000433260 ABCB1P08183 1280 aaPredicted RBP5.31□□□□□ -1.56
HMGB3P24-201ENST00000433260 LAMP1P11279 417 aa5.31□□□□□ -1.56
HMGB3P24-201ENST00000433260 PRPS2P11908 318 aa5.31□□□□□ -1.56
HMGB3P24-201ENST00000433260 ZNF16P17020 682 aaPredicted RBP5.31□□□□□ -1.56
HMGB3P24-201ENST00000433260 LBPP18428 481 aa5.31□□□□□ -1.56
HMGB3P24-201ENST00000433260 NTSP30990 170 aa5.31□□□□□ -1.56
HMGB3P24-201ENST00000433260 MC3RP41968 323 aa5.31□□□□□ -1.56
HMGB3P24-201ENST00000433260 GSTM5P46439 218 aa5.31□□□□□ -1.56
HMGB3P24-201ENST00000433260 RFX3P48380 749 aa5.31□□□□□ -1.56
HMGB3P24-201ENST00000433260 SLC18A1P54219 525 aa5.31□□□□□ -1.56
HMGB3P24-201ENST00000433260 DIO3P55073 304 aa5.31□□□□□ -1.56
HMGB3P24-201ENST00000433260 NRG3P56975 720 aa5.31□□□□□ -1.56
HMGB3P24-201ENST00000433260 CORO7P57737 925 aa5.31□□□□□ -1.56
HMGB3P24-201ENST00000433260 EMX2Q04743 252 aa5.31□□□□□ -1.56
HMGB3P24-201ENST00000433260 SRSF1Q07955 248 aaKnown RBP eCLIP5.31□□□□□ -1.56
HMGB3P24-201ENST00000433260 ZNF791Q3KP31 576 aaPredicted RBP5.31□□□□□ -1.56
HMGB3P24-201ENST00000433260 ZNF385BQ569K4 471 aa5.31□□□□□ -1.56
HMGB3P24-201ENST00000433260 XKR7Q5GH72 579 aa5.31□□□□□ -1.56
HMGB3P24-201ENST00000433260 CPTPQ5TA50 214 aa5.31□□□□□ -1.56
HMGB3P24-201ENST00000433260 C1QL3Q5VWW1 255 aa5.31□□□□□ -1.56
HMGB3P24-201ENST00000433260 BICRALQ6AI39 1079 aa5.31□□□□□ -1.56
HMGB3P24-201ENST00000433260 ZNF324BQ6AW86 544 aaPredicted RBP5.31□□□□□ -1.56
HMGB3P24-201ENST00000433260 NXNQ6DKJ4 435 aa5.31□□□□□ -1.56
HMGB3P24-201ENST00000433260 WDR75Q8IWA0 830 aaKnown RBP5.31□□□□□ -1.56
HMGB3P24-201ENST00000433260 TRIM42Q8IWZ5 723 aa5.31□□□□□ -1.56
HMGB3P24-201ENST00000433260 GPALPP1Q8IXQ4 340 aa5.31□□□□□ -1.56
HMGB3P24-201ENST00000433260 SLC15A4Q8N697 577 aa5.31□□□□□ -1.56
HMGB3P24-201ENST00000433260 KRTCAP2Q8N6L1 136 aa5.31□□□□□ -1.56
HMGB3P24-201ENST00000433260 ST6GALNAC3Q8NDV1 305 aa5.31□□□□□ -1.56
HMGB3P24-201ENST00000433260 OR2M7Q8NG81 312 aa5.31□□□□□ -1.56
HMGB3P24-201ENST00000433260 OR10G3Q8NGC4 313 aa5.31□□□□□ -1.56
HMGB3P24-201ENST00000433260 DYDC1Q8WWB3 177 aa5.31□□□□□ -1.56
HMGB3P24-201ENST00000433260 NR4A3Q92570 626 aa5.31□□□□□ -1.56
HMGB3P24-201ENST00000433260 ZNF75CPQ92670 426 aaPredicted RBP5.31□□□□□ -1.56
HMGB3P24-201ENST00000433260 DIO2Q92813 273 aa5.31□□□□□ -1.56
HMGB3P24-201ENST00000433260 ADIPOR1Q96A54 375 aa5.31□□□□□ -1.56
HMGB3P24-201ENST00000433260 CTHRC1Q96CG8 243 aa5.31□□□□□ -1.56
HMGB3P24-201ENST00000433260 SPACA9Q96E40 222 aaPredicted RBP5.31□□□□□ -1.56
HMGB3P24-201ENST00000433260 ELP4Q96EB1 424 aa5.31□□□□□ -1.56
HMGB3P24-201ENST00000433260 METTL2AQ96IZ6 378 aaKnown RBP5.31□□□□□ -1.56
HMGB3P24-201ENST00000433260 LCORQ96JN0 433 aaPredicted RBP5.31□□□□□ -1.56
HMGB3P24-201ENST00000433260 AMDHD1Q96NU7 426 aa5.31□□□□□ -1.56
HMGB3P24-201ENST00000433260 BARD1Q99728 777 aaKnown RBP5.31□□□□□ -1.56
HMGB3P24-201ENST00000433260 CCT7Q99832 543 aa5.31□□□□□ -1.56
HMGB3P24-201ENST00000433260 YIPF4Q9BSR8 244 aa5.31□□□□□ -1.56
HMGB3P24-201ENST00000433260 RASSF4Q9H2L5 321 aa5.31□□□□□ -1.56
HMGB3P24-201ENST00000433260 WDR55Q9H6Y2 383 aaPredicted RBP5.31□□□□□ -1.56
HMGB3P24-201ENST00000433260 TRIM45Q9H8W5 580 aaPredicted RBP5.31□□□□□ -1.56
HMGB3P24-201ENST00000433260 FOLH1BQ9HBA9 442 aa5.31□□□□□ -1.56
HMGB3P24-201ENST00000433260 THAP1Q9NVV9 213 aa5.31□□□□□ -1.56
HMGB3P24-201ENST00000433260 TUBA8Q9NY65 449 aaPredicted RBP5.31□□□□□ -1.56
HMGB3P24-201ENST00000433260 PRODH2Q9UF12 536 aa5.31□□□□□ -1.56
HMGB3P24-201ENST00000433260 TMED5Q9Y3A6 229 aa5.31□□□□□ -1.56
HMGB3P24-201ENST00000433260 PCDHGB6Q9Y5F9 930 aa5.31□□□□□ -1.56
HMGB3P24-201ENST00000433260 ZZEF1O43149 2961 aa5.31□□□□□ -1.56
HMGB3P24-201ENST00000433260 FAM208BQ5VWN6 2430 aa5.31□□□□□ -1.56
HMGB3P24-201ENST00000433260 EXPH5Q8NEV8 1989 aa5.3□□□□□ -1.56
HMGB3P24-201ENST00000433260 A0A1B0GTH9 108 aa5.3□□□□□ -1.56
HMGB3P24-201ENST00000433260 A0A1W2PRB8 838 aa5.3□□□□□ -1.56
HMGB3P24-201ENST00000433260 ASPDHA6ND91 283 aa5.3□□□□□ -1.56
HMGB3P24-201ENST00000433260 FAM181BA6NEQ2 426 aa5.3□□□□□ -1.56
HMGB3P24-201ENST00000433260 CAPN14A8MX76 684 aa5.3□□□□□ -1.56
HMGB3P24-201ENST00000433260 NPIPB8E9PQR5 432 aa5.3□□□□□ -1.56
HMGB3P24-201ENST00000433260 M0R082 166 aa5.3□□□□□ -1.56
HMGB3P24-201ENST00000433260 UPK1AO00322 258 aa5.3□□□□□ -1.56
HMGB3P24-201ENST00000433260 TP53I11O14683 189 aa5.3□□□□□ -1.56
HMGB3P24-201ENST00000433260 GNB5O14775 395 aa5.3□□□□□ -1.56
HMGB3P24-201ENST00000433260 TFECO14948 347 aaPredicted RBP5.3□□□□□ -1.56
HMGB3P24-201ENST00000433260 SNNO75324 88 aaPredicted RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms