RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 GFRA1P56159 465 aa13.52□□□□□ -0.25
PRKDC-203ENST00000432581 EXOSC7Q15024 291 aaKnown RBP13.52□□□□□ -0.25
PRKDC-203ENST00000432581 GGTA1PQ4G0N0 100 aa13.52□□□□□ -0.25
PRKDC-203ENST00000432581 TECRLQ5HYJ1 363 aa13.52□□□□□ -0.25
PRKDC-203ENST00000432581 DESI1Q6ICB0 168 aa13.52□□□□□ -0.25
PRKDC-203ENST00000432581 FAM111BQ6SJ93 734 aa13.52□□□□□ -0.25
PRKDC-203ENST00000432581 Q71RC1 249 aaPredicted RBP13.52□□□□□ -0.25
PRKDC-203ENST00000432581 COMMD6Q7Z4G1 85 aa13.52□□□□□ -0.25
PRKDC-203ENST00000432581 CXorf67Q86X51 503 aaPredicted RBP13.52□□□□□ -0.25
PRKDC-203ENST00000432581 PLCZ1Q86YW0 608 aa13.52□□□□□ -0.25
PRKDC-203ENST00000432581 PTGR2Q8N8N7 351 aaPredicted RBP13.52□□□□□ -0.25
PRKDC-203ENST00000432581 WDSUB1Q8N9V3 476 aa13.52□□□□□ -0.25
PRKDC-203ENST00000432581 CTHRC1Q96CG8 243 aa13.52□□□□□ -0.25
PRKDC-203ENST00000432581 TMCO6Q96DC7 493 aa13.52□□□□□ -0.25
PRKDC-203ENST00000432581 LRRC1Q9BTT6 524 aa13.52□□□□□ -0.25
PRKDC-203ENST00000432581 ELOVL6Q9H5J4 265 aa13.52□□□□□ -0.25
PRKDC-203ENST00000432581 ZNF395Q9H8N7 513 aaPredicted RBP13.52□□□□□ -0.25
PRKDC-203ENST00000432581 CLCF1Q9UBD9 225 aa13.52□□□□□ -0.25
PRKDC-203ENST00000432581 PCTPQ9UKL6 214 aa13.52□□□□□ -0.25
PRKDC-203ENST00000432581 PLLPQ9Y342 182 aa13.52□□□□□ -0.25
PRKDC-203ENST00000432581 FREM3P0C091 2139 aa13.51□□□□□ -0.25
PRKDC-203ENST00000432581 A0A1W2PPR1 153 aa13.51□□□□□ -0.25
PRKDC-203ENST00000432581 C2orf72A6NCS6 295 aa13.51□□□□□ -0.25
PRKDC-203ENST00000432581 FRG2CA6NGY1 282 aa13.51□□□□□ -0.25
PRKDC-203ENST00000432581 OR6C70A6NIJ9 312 aa13.51□□□□□ -0.25
PRKDC-203ENST00000432581 STX16-NPEPL1H3BU86 382 aa13.51□□□□□ -0.25
PRKDC-203ENST00000432581 PLOD2O00469 737 aa13.51□□□□□ -0.25
PRKDC-203ENST00000432581 STX16O14662 325 aa13.51□□□□□ -0.25
PRKDC-203ENST00000432581 CBX7O95931 251 aa13.51□□□□□ -0.25
PRKDC-203ENST00000432581 ALDOAP04075 364 aaKnown RBP13.51□□□□□ -0.25
PRKDC-203ENST00000432581 HEXAP06865 529 aa13.51□□□□□ -0.25
PRKDC-203ENST00000432581 RBP1P09455 135 aa13.51□□□□□ -0.25
PRKDC-203ENST00000432581 PCYT1AP49585 367 aa13.51□□□□□ -0.25
PRKDC-203ENST00000432581 LHX2P50458 406 aa13.51□□□□□ -0.25
PRKDC-203ENST00000432581 PSPHP78330 225 aa13.51□□□□□ -0.25
PRKDC-203ENST00000432581 HMGCS1Q01581 520 aa13.51□□□□□ -0.25
PRKDC-203ENST00000432581 GUCY2DQ02846 1103 aa13.51□□□□□ -0.25
PRKDC-203ENST00000432581 TRAF3Q13114 568 aa13.51□□□□□ -0.25
PRKDC-203ENST00000432581 GRAMD2AQ8IUY3 354 aa13.51□□□□□ -0.25
PRKDC-203ENST00000432581 P3H2Q8IVL5 708 aa13.51□□□□□ -0.25
PRKDC-203ENST00000432581 GCNT2Q8N0V5 402 aa13.51□□□□□ -0.25
PRKDC-203ENST00000432581 LRRC75A-AS1Q8N1F1 130 aa13.51□□□□□ -0.25
PRKDC-203ENST00000432581 GBP7Q8N8V2 638 aaPredicted RBP13.51□□□□□ -0.25
PRKDC-203ENST00000432581 ADCY4Q8NFM4 1077 aa13.51□□□□□ -0.25
PRKDC-203ENST00000432581 OR52R1Q8NGF1 315 aa13.51□□□□□ -0.25
PRKDC-203ENST00000432581 RDH11Q8TC12 318 aa13.51□□□□□ -0.25
PRKDC-203ENST00000432581 KLHL29Q96CT2 875 aa13.51□□□□□ -0.25
PRKDC-203ENST00000432581 MRRFQ96E11 262 aaKnown RBP13.51□□□□□ -0.25
PRKDC-203ENST00000432581 PHF21BQ96EK2 531 aa13.51□□□□□ -0.25
PRKDC-203ENST00000432581 COL21A1Q96P44 957 aa13.51□□□□□ -0.25
PRKDC-203ENST00000432581 PIP5K1AQ99755 562 aa13.51□□□□□ -0.25
PRKDC-203ENST00000432581 G6PC3Q9BUM1 346 aa13.51□□□□□ -0.25
PRKDC-203ENST00000432581 FAIM2Q9BWQ8 316 aa13.51□□□□□ -0.25
PRKDC-203ENST00000432581 NMRK1Q9NWW6 199 aa13.51□□□□□ -0.25
PRKDC-203ENST00000432581 EHD3Q9NZN3 535 aa13.51□□□□□ -0.25
PRKDC-203ENST00000432581 SLC12A4Q9UP95 1085 aa13.51□□□□□ -0.25
PRKDC-203ENST00000432581 DLGAP4Q9Y2H0 992 aa13.51□□□□□ -0.25
PRKDC-203ENST00000432581 MRPS18CQ9Y3D5 142 aaKnown RBP13.51□□□□□ -0.25
PRKDC-203ENST00000432581 TESMINQ9Y4I5 508 aa13.51□□□□□ -0.25
PRKDC-203ENST00000432581 ZNF780BQ9Y6R6 833 aa13.51□□□□□ -0.25
PRKDC-203ENST00000432581 JMJD1CQ15652 2540 aa13.5□□□□□ -0.25
PRKDC-203ENST00000432581 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.5□□□□□ -0.25
PRKDC-203ENST00000432581 A0A1W2PNV4 684 aa13.5□□□□□ -0.25
PRKDC-203ENST00000432581 MSTNO14793 375 aa13.5□□□□□ -0.25
PRKDC-203ENST00000432581 HCRTR2O43614 444 aa13.5□□□□□ -0.25
PRKDC-203ENST00000432581 TNFSF13O75888 250 aa13.5□□□□□ -0.25
PRKDC-203ENST00000432581 BCAS2O75934 225 aaPredicted RBP13.5□□□□□ -0.25
PRKDC-203ENST00000432581 CRHP06850 196 aa13.5□□□□□ -0.25
PRKDC-203ENST00000432581 CPOXP36551 454 aa13.5□□□□□ -0.25
PRKDC-203ENST00000432581 TRA2BP62995 288 aaKnown RBP13.5□□□□□ -0.25
PRKDC-203ENST00000432581 C2orf54Q08AI8 447 aa13.5□□□□□ -0.25
PRKDC-203ENST00000432581 UAP1Q16222 522 aaPredicted RBP13.5□□□□□ -0.25
PRKDC-203ENST00000432581 TRMT12Q53H54 448 aaKnown RBP13.5□□□□□ -0.25
PRKDC-203ENST00000432581 OR2A2Q6IF42 318 aa13.5□□□□□ -0.25
PRKDC-203ENST00000432581 ZDHHC24Q6UX98 284 aa13.5□□□□□ -0.25
PRKDC-203ENST00000432581 TAOK1Q7L7X3 1001 aa13.5□□□□□ -0.25
PRKDC-203ENST00000432581 MILR1Q7Z6M3 343 aa13.5□□□□□ -0.25
PRKDC-203ENST00000432581 PIGTQ969N2 578 aa13.5□□□□□ -0.25
PRKDC-203ENST00000432581 TMBIM1Q969X1 311 aa13.5□□□□□ -0.25
PRKDC-203ENST00000432581 ERP27Q96DN0 273 aa13.5□□□□□ -0.25
PRKDC-203ENST00000432581 ARSGQ96EG1 525 aa13.5□□□□□ -0.25
PRKDC-203ENST00000432581 SFXN2Q96NB2 322 aa13.5□□□□□ -0.25
PRKDC-203ENST00000432581 VPS11Q9H270 941 aa13.5□□□□□ -0.25
PRKDC-203ENST00000432581 BRF2Q9HAW0 419 aa13.5□□□□□ -0.25
PRKDC-203ENST00000432581 ZBTB26Q9HCK0 441 aa13.5□□□□□ -0.25
PRKDC-203ENST00000432581 DKKL1Q9UK85 242 aa13.5□□□□□ -0.25
PRKDC-203ENST00000432581 WIF1Q9Y5W5 379 aa13.5□□□□□ -0.25
PRKDC-203ENST00000432581 KIAA1549Q9HCM3 1950 aa13.5□□□□□ -0.25
PRKDC-203ENST00000432581 DOCK7Q96N67 2140 aa13.49□□□□□ -0.25
PRKDC-203ENST00000432581 SMPD2O60906 423 aa13.49□□□□□ -0.25
PRKDC-203ENST00000432581 SMIM24O75264 130 aa13.49□□□□□ -0.25
PRKDC-203ENST00000432581 REM1O75628 298 aa13.49□□□□□ -0.25
PRKDC-203ENST00000432581 PCSK2P16519 638 aa13.49□□□□□ -0.25
PRKDC-203ENST00000432581 ZNF708P17019 499 aa13.49□□□□□ -0.25
PRKDC-203ENST00000432581 STARP49675 285 aa13.49□□□□□ -0.25
PRKDC-203ENST00000432581 EMDP50402 254 aa13.49□□□□□ -0.25
PRKDC-203ENST00000432581 CLDN18P56856 261 aa13.49□□□□□ -0.25
PRKDC-203ENST00000432581 GALNT1Q10472 559 aaPredicted RBP13.49□□□□□ -0.25
PRKDC-203ENST00000432581 EFR3AQ14156 821 aa13.49□□□□□ -0.25
PRKDC-203ENST00000432581 BCL2A1Q16548 175 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms