RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 SCN2AQ99250 2005 aa13.08□□□□□ -0.32
HOXC4-202ENST00000430889 PRAMEF26H0Y7S4 382 aa13.08□□□□□ -0.32
HOXC4-202ENST00000430889 J3QRK9 145 aa13.08□□□□□ -0.32
HOXC4-202ENST00000430889 ENTPD6O75354 484 aa13.08□□□□□ -0.32
HOXC4-202ENST00000430889 NME6O75414 186 aaPredicted RBP13.08□□□□□ -0.32
HOXC4-202ENST00000430889 SOX14O95416 240 aa13.08□□□□□ -0.32
HOXC4-202ENST00000430889 CPN2P22792 545 aa13.08□□□□□ -0.32
HOXC4-202ENST00000430889 PRKAR1BP31321 381 aa13.08□□□□□ -0.32
HOXC4-202ENST00000430889 DGKEP52429 567 aa13.08□□□□□ -0.32
HOXC4-202ENST00000430889 LSM3P62310 102 aaKnown RBP13.08□□□□□ -0.32
HOXC4-202ENST00000430889 LSM11P83369 360 aaKnown RBP eCLIP13.08□□□□□ -0.32
HOXC4-202ENST00000430889 ILF3Q12906 894 aaKnown RBP eCLIP13.08□□□□□ -0.32
HOXC4-202ENST00000430889 OCLNQ16625 522 aa13.08□□□□□ -0.32
HOXC4-202ENST00000430889 SYT16Q17RD7 645 aa13.08□□□□□ -0.32
HOXC4-202ENST00000430889 GPAT3Q53EU6 434 aa13.08□□□□□ -0.32
HOXC4-202ENST00000430889 PLAG1Q6DJT9 500 aa13.08□□□□□ -0.32
HOXC4-202ENST00000430889 FRRS1Q6ZNA5 592 aa13.08□□□□□ -0.32
HOXC4-202ENST00000430889 ZNF367Q7RTV3 350 aa13.08□□□□□ -0.32
HOXC4-202ENST00000430889 HMGN2P46Q86SG4 172 aa13.08□□□□□ -0.32
HOXC4-202ENST00000430889 MRGPREQ86SM8 312 aa13.08□□□□□ -0.32
HOXC4-202ENST00000430889 STX19Q8N4C7 294 aa13.08□□□□□ -0.32
HOXC4-202ENST00000430889 CAMKVQ8NCB2 501 aa13.08□□□□□ -0.32
HOXC4-202ENST00000430889 OR6Q1Q8NGQ2 317 aa13.08□□□□□ -0.32
HOXC4-202ENST00000430889 NR4A3Q92570 626 aa13.08□□□□□ -0.32
HOXC4-202ENST00000430889 MS4A4EQ96PG1 132 aa13.08□□□□□ -0.32
HOXC4-202ENST00000430889 ZFYVE21Q9BQ24 234 aa13.08□□□□□ -0.32
HOXC4-202ENST00000430889 CPNE7Q9UBL6 633 aa13.08□□□□□ -0.32
HOXC4-202ENST00000430889 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.08□□□□□ -0.32
HOXC4-202ENST00000430889 GPR55Q9Y2T6 319 aaPredicted RBP13.08□□□□□ -0.32
HOXC4-202ENST00000430889 MRPS2Q9Y399 296 aaKnown RBP13.08□□□□□ -0.32
HOXC4-202ENST00000430889 MTCH2Q9Y6C9 303 aa13.08□□□□□ -0.32
HOXC4-202ENST00000430889 EFCAB9A8MZ26 197 aa13.07□□□□□ -0.32
HOXC4-202ENST00000430889 H0YGG7 62 aa13.07□□□□□ -0.32
HOXC4-202ENST00000430889 M0R3G1 203 aa13.07□□□□□ -0.32
HOXC4-202ENST00000430889 TNFP01375 233 aa13.07□□□□□ -0.32
HOXC4-202ENST00000430889 ALPPP05187 535 aa13.07□□□□□ -0.32
HOXC4-202ENST00000430889 IFI6P09912 130 aa13.07□□□□□ -0.32
HOXC4-202ENST00000430889 GADD45AP24522 165 aa13.07□□□□□ -0.32
HOXC4-202ENST00000430889 POU1F1P28069 291 aa13.07□□□□□ -0.32
HOXC4-202ENST00000430889 TGFBR1P36897 503 aa13.07□□□□□ -0.32
HOXC4-202ENST00000430889 PDX1P52945 283 aa13.07□□□□□ -0.32
HOXC4-202ENST00000430889 ARF3P61204 181 aaPredicted RBP13.07□□□□□ -0.32
HOXC4-202ENST00000430889 CDK5Q00535 292 aa13.07□□□□□ -0.32
HOXC4-202ENST00000430889 TARDBPQ13148 414 aaKnown RBP eCLIP13.07□□□□□ -0.32
HOXC4-202ENST00000430889 DGUOKQ16854 277 aa13.07□□□□□ -0.32
HOXC4-202ENST00000430889 FAM214AQ32MH5 1076 aa13.07□□□□□ -0.32
HOXC4-202ENST00000430889 INAVAQ3KP66 663 aa13.07□□□□□ -0.32
HOXC4-202ENST00000430889 DEFB134Q4QY38 66 aa13.07□□□□□ -0.32
HOXC4-202ENST00000430889 ZNF628Q5EBL2 1059 aa13.07□□□□□ -0.32
HOXC4-202ENST00000430889 RNLSQ5VYX0 342 aa13.07□□□□□ -0.32
HOXC4-202ENST00000430889 KIAA0895LQ68EN5 471 aa13.07□□□□□ -0.32
HOXC4-202ENST00000430889 IGFN1Q86VF2 1251 aa13.07□□□□□ -0.32
HOXC4-202ENST00000430889 VRK2Q86Y07 508 aa13.07□□□□□ -0.32
HOXC4-202ENST00000430889 SFTPA2Q8IWL1 248 aa13.07□□□□□ -0.32
HOXC4-202ENST00000430889 OR4K14Q8NGD5 310 aa13.07□□□□□ -0.32
HOXC4-202ENST00000430889 B4GALNT2Q8NHY0 566 aa13.07□□□□□ -0.32
HOXC4-202ENST00000430889 ZCCHC10Q8TBK6 192 aa13.07□□□□□ -0.32
HOXC4-202ENST00000430889 HMGB4Q8WW32 186 aa13.07□□□□□ -0.32
HOXC4-202ENST00000430889 FAM3CQ92520 227 aa13.07□□□□□ -0.32
HOXC4-202ENST00000430889 TMEM131Q92545 1883 aa13.07□□□□□ -0.32
HOXC4-202ENST00000430889 ORAI3Q9BRQ5 295 aa13.07□□□□□ -0.32
HOXC4-202ENST00000430889 DNAAF2Q9NVR5 837 aaKnown RBP13.07□□□□□ -0.32
HOXC4-202ENST00000430889 TAS2R16Q9NYV7 291 aa13.07□□□□□ -0.32
HOXC4-202ENST00000430889 LSM2Q9Y333 95 aaKnown RBP13.07□□□□□ -0.32
HOXC4-202ENST00000430889 A0A087WUU8 490 aa13.06□□□□□ -0.32
HOXC4-202ENST00000430889 KIR2DS5A0A0G2JLQ3 304 aa13.06□□□□□ -0.32
HOXC4-202ENST00000430889 A0A0G2JNG1 304 aa13.06□□□□□ -0.32
HOXC4-202ENST00000430889 GSAPA4D1B5 854 aa13.06□□□□□ -0.32
HOXC4-202ENST00000430889 URADA6NGE7 173 aa13.06□□□□□ -0.32
HOXC4-202ENST00000430889 C2orf74A8MZ97 194 aa13.06□□□□□ -0.32
HOXC4-202ENST00000430889 CLDN25C9JDP6 229 aa13.06□□□□□ -0.32
HOXC4-202ENST00000430889 KIR2DS3K7RE56 304 aa13.06□□□□□ -0.32
HOXC4-202ENST00000430889 B3GALT2O43825 422 aa13.06□□□□□ -0.32
HOXC4-202ENST00000430889 NADKO95544 446 aaPredicted RBP13.06□□□□□ -0.32
HOXC4-202ENST00000430889 CELA2BP08218 269 aaPredicted RBP13.06□□□□□ -0.32
HOXC4-202ENST00000430889 ALOX12P18054 663 aa13.06□□□□□ -0.32
HOXC4-202ENST00000430889 FOXD4Q12950 439 aaPredicted RBP13.06□□□□□ -0.32
HOXC4-202ENST00000430889 FZD2Q14332 565 aa13.06□□□□□ -0.32
HOXC4-202ENST00000430889 KIR2DS5Q14953 304 aa13.06□□□□□ -0.32
HOXC4-202ENST00000430889 ZNF311Q5JNZ3 666 aa13.06□□□□□ -0.32
HOXC4-202ENST00000430889 MANEAQ5SRI9 462 aa13.06□□□□□ -0.32
HOXC4-202ENST00000430889 C6orf132Q5T0Z8 1188 aa13.06□□□□□ -0.32
HOXC4-202ENST00000430889 MFSD4BQ5TF39 518 aa13.06□□□□□ -0.32
HOXC4-202ENST00000430889 MEDAGQ5VYS4 303 aa13.06□□□□□ -0.32
HOXC4-202ENST00000430889 IQCHQ86VS3 1027 aa13.06□□□□□ -0.32
HOXC4-202ENST00000430889 KIF18BQ86Y91 864 aa13.06□□□□□ -0.32
HOXC4-202ENST00000430889 ARHGEF39Q8N4T4 335 aa13.06□□□□□ -0.32
HOXC4-202ENST00000430889 FAM26EQ8N5C1 309 aa13.06□□□□□ -0.32
HOXC4-202ENST00000430889 SLC16A11Q8NCK7 471 aa13.06□□□□□ -0.32
HOXC4-202ENST00000430889 SIMC1Q8NDZ2 872 aa13.06□□□□□ -0.32
HOXC4-202ENST00000430889 OR8J1Q8NGP2 316 aa13.06□□□□□ -0.32
HOXC4-202ENST00000430889 OR10G6Q8NH81 332 aa13.06□□□□□ -0.32
HOXC4-202ENST00000430889 MSANTD3Q96H12 275 aa13.06□□□□□ -0.32
HOXC4-202ENST00000430889 TAPBPLQ9BX59 468 aa13.06□□□□□ -0.32
HOXC4-202ENST00000430889 POLDIP3Q9BY77 421 aaKnown RBP13.06□□□□□ -0.32
HOXC4-202ENST00000430889 GSDMCQ9BYG8 508 aa13.06□□□□□ -0.32
HOXC4-202ENST00000430889 ANKRD19PQ9H560 264 aa13.06□□□□□ -0.32
HOXC4-202ENST00000430889 ZNF576Q9H609 170 aa13.06□□□□□ -0.32
HOXC4-202ENST00000430889 ANKHQ9HCJ1 492 aa13.06□□□□□ -0.32
HOXC4-202ENST00000430889 EQTNQ9NQ60 294 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms