RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 RTN4RQ9BZR6 473 aa10.74□□□□□ -0.69
HDAC4-202ENST00000430200 LIME1Q9H400 295 aa10.74□□□□□ -0.69
HDAC4-202ENST00000430200 AHSPQ9NZD4 102 aa10.74□□□□□ -0.69
HDAC4-202ENST00000430200 B4GALT7Q9UBV7 327 aa10.74□□□□□ -0.69
HDAC4-202ENST00000430200 FBXL2Q9UKC9 423 aa10.74□□□□□ -0.69
HDAC4-202ENST00000430200 PRAMEF25A6NGN4 478 aa10.73□□□□□ -0.69
HDAC4-202ENST00000430200 FRG2CA6NGY1 282 aa10.73□□□□□ -0.69
HDAC4-202ENST00000430200 TP53I11O14683 189 aa10.73□□□□□ -0.69
HDAC4-202ENST00000430200 TO15178 435 aa10.73□□□□□ -0.69
HDAC4-202ENST00000430200 TSPAN2O60636 221 aa10.73□□□□□ -0.69
HDAC4-202ENST00000430200 ICOSLGO75144 302 aa10.73□□□□□ -0.69
HDAC4-202ENST00000430200 TRAPPC6AO75865 159 aa10.73□□□□□ -0.69
HDAC4-202ENST00000430200 HSD3B1P14060 373 aa10.73□□□□□ -0.69
HDAC4-202ENST00000430200 BMP5P22003 454 aa10.73□□□□□ -0.69
HDAC4-202ENST00000430200 HSD3B2P26439 372 aa10.73□□□□□ -0.69
HDAC4-202ENST00000430200 HMOX2P30519 316 aa10.73□□□□□ -0.69
HDAC4-202ENST00000430200 MASP1P48740 699 aa10.73□□□□□ -0.69
HDAC4-202ENST00000430200 TMED10P49755 219 aaKnown RBP10.73□□□□□ -0.69
HDAC4-202ENST00000430200 AGFG1P52594 562 aaKnown RBP10.73□□□□□ -0.69
HDAC4-202ENST00000430200 NHSL2Q5HYW2 709 aa10.73□□□□□ -0.69
HDAC4-202ENST00000430200 TMEM198Q66K66 360 aa10.73□□□□□ -0.69
HDAC4-202ENST00000430200 TMEM81Q6P7N7 255 aa10.73□□□□□ -0.69
HDAC4-202ENST00000430200 GALNT18Q6P9A2 607 aa10.73□□□□□ -0.69
HDAC4-202ENST00000430200 ZYG11AQ6WRX3 759 aa10.73□□□□□ -0.69
HDAC4-202ENST00000430200 FRMD7Q6ZUT3 714 aa10.73□□□□□ -0.69
HDAC4-202ENST00000430200 ZZZ3Q8IYH5 903 aa10.73□□□□□ -0.69
HDAC4-202ENST00000430200 LIX1Q8N485 282 aa10.73□□□□□ -0.69
HDAC4-202ENST00000430200 C9orf106Q8NAJ2 232 aa10.73□□□□□ -0.69
HDAC4-202ENST00000430200 METTL6Q8TCB7 284 aa10.73□□□□□ -0.69
HDAC4-202ENST00000430200 MTBPQ96DY7 904 aa10.73□□□□□ -0.69
HDAC4-202ENST00000430200 SHCBP1LQ9BZQ2 653 aa10.73□□□□□ -0.69
HDAC4-202ENST00000430200 METTL7AQ9H8H3 244 aa10.73□□□□□ -0.69
HDAC4-202ENST00000430200 FOLH1BQ9HBA9 442 aa10.73□□□□□ -0.69
HDAC4-202ENST00000430200 CAMK2AQ9UQM7 478 aa10.73□□□□□ -0.69
HDAC4-202ENST00000430200 GPR55Q9Y2T6 319 aaPredicted RBP10.73□□□□□ -0.69
HDAC4-202ENST00000430200 CCL27Q9Y4X3 112 aa10.73□□□□□ -0.69
HDAC4-202ENST00000430200 POLR3HQ9Y535 204 aaPredicted RBP10.73□□□□□ -0.69
HDAC4-202ENST00000430200 HEATR5AQ86XA9 2040 aa10.73□□□□□ -0.69
HDAC4-202ENST00000430200 NIPBLQ6KC79 2804 aaeCLIP10.72□□□□□ -0.69
HDAC4-202ENST00000430200 NUP214P35658 2090 aaPredicted RBP10.72□□□□□ -0.69
HDAC4-202ENST00000430200 SNX4O95219 450 aa10.72□□□□□ -0.69
HDAC4-202ENST00000430200 PSMG1O95456 288 aa10.72□□□□□ -0.69
HDAC4-202ENST00000430200 ESRRBO95718 433 aa10.72□□□□□ -0.69
HDAC4-202ENST00000430200 EPPINO95925 133 aa10.72□□□□□ -0.69
HDAC4-202ENST00000430200 KRT6AP02538 564 aa10.72□□□□□ -0.69
HDAC4-202ENST00000430200 KRT6BP04259 564 aa10.72□□□□□ -0.69
HDAC4-202ENST00000430200 GABRA1P14867 456 aa10.72□□□□□ -0.69
HDAC4-202ENST00000430200 TCEA1P23193 301 aaKnown RBP10.72□□□□□ -0.69
HDAC4-202ENST00000430200 TACR1P25103 407 aa10.72□□□□□ -0.69
HDAC4-202ENST00000430200 DEKP35659 375 aaKnown RBP10.72□□□□□ -0.69
HDAC4-202ENST00000430200 MC3RP41968 323 aa10.72□□□□□ -0.69
HDAC4-202ENST00000430200 PPICP45877 212 aa10.72□□□□□ -0.69
HDAC4-202ENST00000430200 KRT6CP48668 564 aa10.72□□□□□ -0.69
HDAC4-202ENST00000430200 GAS1P54826 345 aa10.72□□□□□ -0.69
HDAC4-202ENST00000430200 NRG3P56975 720 aa10.72□□□□□ -0.69
HDAC4-202ENST00000430200 TRA2BP62995 288 aaKnown RBP10.72□□□□□ -0.69
HDAC4-202ENST00000430200 BTKQ06187 659 aa10.72□□□□□ -0.69
HDAC4-202ENST00000430200 FOXF2Q12947 444 aa10.72□□□□□ -0.69
HDAC4-202ENST00000430200 MYBPHQ13203 477 aa10.72□□□□□ -0.69
HDAC4-202ENST00000430200 SLC25A35Q3KQZ1 300 aa10.72□□□□□ -0.69
HDAC4-202ENST00000430200 C6orf163Q5TEZ5 329 aa10.72□□□□□ -0.69
HDAC4-202ENST00000430200 TMEM200AQ86VY9 491 aa10.72□□□□□ -0.69
HDAC4-202ENST00000430200 IFT20Q8IY31 132 aa10.72□□□□□ -0.69
HDAC4-202ENST00000430200 CCNYL1Q8N7R7 359 aa10.72□□□□□ -0.69
HDAC4-202ENST00000430200 CDC26Q8NHZ8 85 aa10.72□□□□□ -0.69
HDAC4-202ENST00000430200 RDH11Q8TC12 318 aa10.72□□□□□ -0.69
HDAC4-202ENST00000430200 EFHD2Q96C19 240 aaPredicted RBP10.72□□□□□ -0.69
HDAC4-202ENST00000430200 SLC35A4Q96G79 324 aa10.72□□□□□ -0.69
HDAC4-202ENST00000430200 TUBA1CQ9BQE3 449 aa10.72□□□□□ -0.69
HDAC4-202ENST00000430200 ZNF559Q9BR84 538 aa10.72□□□□□ -0.69
HDAC4-202ENST00000430200 GPATCH1Q9BRR8 931 aaKnown RBP10.72□□□□□ -0.69
HDAC4-202ENST00000430200 OR2B2Q9GZK3 357 aa10.72□□□□□ -0.69
HDAC4-202ENST00000430200 MID1IP1Q9NPA3 183 aa10.72□□□□□ -0.69
HDAC4-202ENST00000430200 CRIM1Q9NZV1 1036 aa10.72□□□□□ -0.69
HDAC4-202ENST00000430200 KCNN3Q9UGI6 736 aa10.72□□□□□ -0.69
HDAC4-202ENST00000430200 FETUBQ9UGM5 382 aa10.72□□□□□ -0.69
HDAC4-202ENST00000430200 PCDHGB3Q9Y5G1 929 aa10.72□□□□□ -0.69
HDAC4-202ENST00000430200 ZANQ9Y493 2812 aa10.72□□□□□ -0.69
HDAC4-202ENST00000430200 GNG14A0A1W2PPG7 69 aa10.71□□□□□ -0.69
HDAC4-202ENST00000430200 MBD3L4A6NDZ8 208 aaPredicted RBP10.71□□□□□ -0.69
HDAC4-202ENST00000430200 MBD3L3A6NE82 208 aaPredicted RBP10.71□□□□□ -0.69
HDAC4-202ENST00000430200 MBD3L5A6NJ08 208 aaPredicted RBP10.71□□□□□ -0.69
HDAC4-202ENST00000430200 SMIM23A6NLE4 172 aa10.71□□□□□ -0.69
HDAC4-202ENST00000430200 ACOX3O15254 700 aa10.71□□□□□ -0.69
HDAC4-202ENST00000430200 PLIN3O60664 434 aa10.71□□□□□ -0.69
HDAC4-202ENST00000430200 ULK1O75385 1050 aa10.71□□□□□ -0.69
HDAC4-202ENST00000430200 JUNP05412 331 aaKnown RBP10.71□□□□□ -0.69
HDAC4-202ENST00000430200 ENO1P06733 434 aaKnown RBP10.71□□□□□ -0.69
HDAC4-202ENST00000430200 TAC1P20366 129 aa10.71□□□□□ -0.69
HDAC4-202ENST00000430200 DRD5P21918 477 aa10.71□□□□□ -0.69
HDAC4-202ENST00000430200 DNAJA1P31689 397 aaKnown RBP10.71□□□□□ -0.69
HDAC4-202ENST00000430200 STARP49675 285 aa10.71□□□□□ -0.69
HDAC4-202ENST00000430200 PKNOX1P55347 436 aa10.71□□□□□ -0.69
HDAC4-202ENST00000430200 GFRA1P56159 465 aa10.71□□□□□ -0.69
HDAC4-202ENST00000430200 B3GALT5-AS1P59052 145 aa10.71□□□□□ -0.69
HDAC4-202ENST00000430200 PSG6Q00889 435 aa10.71□□□□□ -0.69
HDAC4-202ENST00000430200 ACSM2AQ08AH3 577 aa10.71□□□□□ -0.69
HDAC4-202ENST00000430200 PCLAFQ15004 111 aa10.71□□□□□ -0.69
HDAC4-202ENST00000430200 TOMM20Q15388 145 aa10.71□□□□□ -0.69
HDAC4-202ENST00000430200 ZNF385BQ569K4 471 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms