RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 ISPDA4D126 451 aa7.62□□□□□ -1.19
HPS4-205ENST00000429411 IGLON5A6NGN9 336 aa7.62□□□□□ -1.19
HPS4-205ENST00000429411 SNTNA6NMZ2 147 aa7.62□□□□□ -1.19
HPS4-205ENST00000429411 H3BSH0 61 aa7.62□□□□□ -1.19
HPS4-205ENST00000429411 CAPN5O15484 640 aaPredicted RBP7.62□□□□□ -1.19
HPS4-205ENST00000429411 UGDHO60701 494 aa7.62□□□□□ -1.19
HPS4-205ENST00000429411 TSPAN9O75954 239 aa7.62□□□□□ -1.19
HPS4-205ENST00000429411 MRPL3P09001 348 aaKnown RBP7.62□□□□□ -1.19
HPS4-205ENST00000429411 OSMP13725 252 aa7.62□□□□□ -1.19
HPS4-205ENST00000429411 CXCR2P25025 360 aa7.62□□□□□ -1.19
HPS4-205ENST00000429411 IL12RB1P42701 662 aa7.62□□□□□ -1.19
HPS4-205ENST00000429411 PRLHRP49683 370 aa7.62□□□□□ -1.19
HPS4-205ENST00000429411 CCR8P51685 355 aa7.62□□□□□ -1.19
HPS4-205ENST00000429411 CRYBA2P53672 197 aa7.62□□□□□ -1.19
HPS4-205ENST00000429411 DHCR24Q15392 516 aa7.62□□□□□ -1.19
HPS4-205ENST00000429411 ZNF311Q5JNZ3 666 aa7.62□□□□□ -1.19
HPS4-205ENST00000429411 HENMT1Q5T8I9 393 aaKnown RBP7.62□□□□□ -1.19
HPS4-205ENST00000429411 PTCRAQ6ISU1 281 aaPredicted RBP7.62□□□□□ -1.19
HPS4-205ENST00000429411 PODNL1Q6PEZ8 512 aa7.62□□□□□ -1.19
HPS4-205ENST00000429411 PAMR1Q6UXH9 720 aa7.62□□□□□ -1.19
HPS4-205ENST00000429411 ADIPOR2Q86V24 386 aa7.62□□□□□ -1.19
HPS4-205ENST00000429411 PLA2G15Q8NCC3 412 aa7.62□□□□□ -1.19
HPS4-205ENST00000429411 NLGN4YQ8NFZ3 816 aaPredicted RBP7.62□□□□□ -1.19
HPS4-205ENST00000429411 SLC7A13Q8TCU3 470 aa7.62□□□□□ -1.19
HPS4-205ENST00000429411 ADAMTS15Q8TE58 950 aa7.62□□□□□ -1.19
HPS4-205ENST00000429411 KCTD7Q96MP8 289 aa7.62□□□□□ -1.19
HPS4-205ENST00000429411 TREX2Q9BQ50 279 aaPredicted RBP7.62□□□□□ -1.19
HPS4-205ENST00000429411 CPEB1Q9BZB8 566 aaKnown RBP7.62□□□□□ -1.19
HPS4-205ENST00000429411 GABARAPL1Q9H0R8 117 aa7.62□□□□□ -1.19
HPS4-205ENST00000429411 SP140LQ9H930 580 aa7.62□□□□□ -1.19
HPS4-205ENST00000429411 ADAP2Q9NPF8 381 aa7.62□□□□□ -1.19
HPS4-205ENST00000429411 FZD3Q9NPG1 666 aa7.62□□□□□ -1.19
HPS4-205ENST00000429411 CMAHPQ9Y471 501 aa7.62□□□□□ -1.19
HPS4-205ENST00000429411 PLPP1O14494 284 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 CSO75390 466 aaKnown RBP7.61□□□□□ -1.19
HPS4-205ENST00000429411 GCM2O75603 506 aaPredicted RBP7.61□□□□□ -1.19
HPS4-205ENST00000429411 ARAFP10398 606 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 SLC2A2P11168 524 aaPredicted RBP7.61□□□□□ -1.19
HPS4-205ENST00000429411 CDH11P55287 796 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 SLC7A9P82251 487 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 SGCGQ13326 291 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 GPR19Q15760 415 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 ZSWIM7Q19AV6 140 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 MPP7Q5T2T1 576 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 NDUFAF5Q5TEU4 345 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 KHDRBS2Q5VWX1 349 aaKnown RBP7.61□□□□□ -1.19
HPS4-205ENST00000429411 FAM83HQ6ZRV2 1179 aaPredicted RBP7.61□□□□□ -1.19
HPS4-205ENST00000429411 GLCCI1Q86VQ1 547 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 CPXM2Q8N436 756 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 ATP6V1C2Q8NEY4 427 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 OR52E4Q8NGH9 312 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 OR51G2Q8NGK0 314 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 OR8J1Q8NGP2 316 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 OR56A3Q8NH54 315 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 SMG7Q92540 1137 aaKnown RBP7.61□□□□□ -1.19
HPS4-205ENST00000429411 C16orf58Q96GQ5 468 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 DPH7Q9BTV6 452 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 FAIM2Q9BWQ8 316 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 FKBP14Q9NWM8 211 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 MAT2BQ9NZL9 334 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 DNMT3BQ9UBC3 853 aaKnown RBP7.61□□□□□ -1.19
HPS4-205ENST00000429411 SNX7Q9UNH6 387 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 PCDHGB1Q9Y5G3 927 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 MTCH2Q9Y6C9 303 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 CSNK1G3Q9Y6M4 447 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 C1orf226A1L170 272 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 PRKYO43930 277 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 PTTG1O95997 202 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 HEXBP07686 556 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 IL9P15248 144 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 LIMK1P53667 647 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 SMIM11AP58511 58 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 MESP2Q0VG99 397 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 NDUFA5Q16718 116 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 FCRLBQ6BAA4 426 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 TUBA3EQ6PEY2 450 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 SLC9B2Q86UD5 537 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 LACC1Q8IV20 430 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 SFTPA1Q8IWL2 248 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 SLC30A8Q8IWU4 369 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 YAF2Q8IY57 180 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 AMER3Q8N944 861 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 OR10H4Q8NGA5 316 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 OR4F15Q8NGB8 312 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 RGMAQ96B86 450 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 PPP1R16AQ96I34 528 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 LYSMD1Q96S90 227 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 NLKQ9UBE8 527 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 SEC14L4Q9UDX3 406 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 NLRC5Q86WI3 1866 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 SLC5A10A0PJK1 596 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 PRAMEF25A6NGN4 478 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 DLL1O00548 723 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 HYAL3O43820 417 aaPredicted RBP7.61□□□□□ -1.19
HPS4-205ENST00000429411 RPN2P04844 631 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 HMGN2P05204 90 aaKnown RBP7.61□□□□□ -1.19
HPS4-205ENST00000429411 SAGP10523 405 aaPredicted RBP7.61□□□□□ -1.19
HPS4-205ENST00000429411 IL7P13232 177 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 ZNF3P17036 446 aa7.61□□□□□ -1.19
HPS4-205ENST00000429411 CPN2P22792 545 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms