RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 IGKV3D-11A0A0A0MRZ8 115 aa8.85□□□□□ -0.99
HMGCLL1-206ENST00000428842 SMIM31A0A1B0GVY4 71 aa8.85□□□□□ -0.99
HMGCLL1-206ENST00000428842 C2orf72A6NCS6 295 aa8.85□□□□□ -0.99
HMGCLL1-206ENST00000428842 BBIP1A8MTZ0 92 aa8.85□□□□□ -0.99
HMGCLL1-206ENST00000428842 ARPC2O15144 300 aa8.85□□□□□ -0.99
HMGCLL1-206ENST00000428842 FRS3O43559 492 aa8.85□□□□□ -0.99
HMGCLL1-206ENST00000428842 KLK3P07288 261 aaPredicted RBP8.85□□□□□ -0.99
HMGCLL1-206ENST00000428842 C8BP07358 591 aa8.85□□□□□ -0.99
HMGCLL1-206ENST00000428842 YAP1P46937 504 aaKnown RBP8.85□□□□□ -0.99
HMGCLL1-206ENST00000428842 OR1E2P47887 323 aa8.85□□□□□ -0.99
HMGCLL1-206ENST00000428842 TRA2BP62995 288 aaKnown RBP8.85□□□□□ -0.99
HMGCLL1-206ENST00000428842 TRA2AQ13595 282 aaKnown RBP eCLIP8.85□□□□□ -0.99
HMGCLL1-206ENST00000428842 MRPL14Q6P1L8 145 aaKnown RBP8.85□□□□□ -0.99
HMGCLL1-206ENST00000428842 GALNT12Q8IXK2 581 aa8.85□□□□□ -0.99
HMGCLL1-206ENST00000428842 CARFQ8N187 725 aa8.85□□□□□ -0.99
HMGCLL1-206ENST00000428842 OR2T12Q8NG77 320 aa8.85□□□□□ -0.99
HMGCLL1-206ENST00000428842 C16orf52Q8NHV5 167 aa8.85□□□□□ -0.99
HMGCLL1-206ENST00000428842 WDR36Q8NI36 951 aaKnown RBP8.85□□□□□ -0.99
HMGCLL1-206ENST00000428842 NCLNQ969V3 563 aa8.85□□□□□ -0.99
HMGCLL1-206ENST00000428842 ROPN1LQ96C74 230 aa8.85□□□□□ -0.99
HMGCLL1-206ENST00000428842 ASB9Q96DX5 294 aa8.85□□□□□ -0.99
HMGCLL1-206ENST00000428842 DUS3LQ96G46 650 aaKnown RBP8.85□□□□□ -0.99
HMGCLL1-206ENST00000428842 SLC35A4Q96G79 324 aa8.85□□□□□ -0.99
HMGCLL1-206ENST00000428842 LIN37Q96GY3 246 aaPredicted RBP8.85□□□□□ -0.99
HMGCLL1-206ENST00000428842 TAAR9Q96RI9 348 aa8.85□□□□□ -0.99
HMGCLL1-206ENST00000428842 PKP2Q99959 881 aa8.85□□□□□ -0.99
HMGCLL1-206ENST00000428842 NUDT9Q9BW91 350 aa8.85□□□□□ -0.99
HMGCLL1-206ENST00000428842 EPS8L2Q9H6S3 715 aa8.85□□□□□ -0.99
HMGCLL1-206ENST00000428842 CTPS2Q9NRF8 586 aa8.85□□□□□ -0.99
HMGCLL1-206ENST00000428842 MS4A12Q9NXJ0 267 aa8.85□□□□□ -0.99
HMGCLL1-206ENST00000428842 UBAP1Q9NZ09 502 aa8.85□□□□□ -0.99
HMGCLL1-206ENST00000428842 ABCD2Q9UBJ2 740 aa8.85□□□□□ -0.99
HMGCLL1-206ENST00000428842 ZNF223Q9UK11 482 aaPredicted RBP8.85□□□□□ -0.99
HMGCLL1-206ENST00000428842 SRPK3Q9UPE1 567 aa8.85□□□□□ -0.99
HMGCLL1-206ENST00000428842 PCDHGA1Q9Y5H4 931 aa8.85□□□□□ -0.99
HMGCLL1-206ENST00000428842 COMMD3-BMI1R4GMX3 469 aa8.85□□□□□ -0.99
HMGCLL1-206ENST00000428842 SPACA6W5XKT8 324 aa8.85□□□□□ -0.99
HMGCLL1-206ENST00000428842 CLDN4O14493 209 aa8.85□□□□□ -0.99
HMGCLL1-206ENST00000428842 ERN1O75460 977 aaKnown RBP8.85□□□□□ -0.99
HMGCLL1-206ENST00000428842 DDAH2O95865 285 aa8.85□□□□□ -0.99
HMGCLL1-206ENST00000428842 IGKV1D-16P01601 117 aa8.85□□□□□ -0.99
HMGCLL1-206ENST00000428842 ACP2P11117 423 aa8.85□□□□□ -0.99
HMGCLL1-206ENST00000428842 DLSTP36957 453 aa8.85□□□□□ -0.99
HMGCLL1-206ENST00000428842 HSPA13P48723 471 aa8.85□□□□□ -0.99
HMGCLL1-206ENST00000428842 EMDP50402 254 aa8.85□□□□□ -0.99
HMGCLL1-206ENST00000428842 EMP2P54851 167 aa8.85□□□□□ -0.99
HMGCLL1-206ENST00000428842 TRAP1Q12931 704 aaKnown RBP8.85□□□□□ -0.99
HMGCLL1-206ENST00000428842 NCF4Q15080 339 aa8.85□□□□□ -0.99
HMGCLL1-206ENST00000428842 DPY19L1Q2PZI1 675 aa8.85□□□□□ -0.99
HMGCLL1-206ENST00000428842 FHL5Q5TD97 284 aa8.85□□□□□ -0.99
HMGCLL1-206ENST00000428842 ANXA8L1Q5VT79 327 aa8.85□□□□□ -0.99
HMGCLL1-206ENST00000428842 NPSR1Q6W5P4 371 aa8.85□□□□□ -0.99
HMGCLL1-206ENST00000428842 HACD2Q6Y1H2 254 aa8.85□□□□□ -0.99
HMGCLL1-206ENST00000428842 GPR155Q7Z3F1 870 aa8.85□□□□□ -0.99
HMGCLL1-206ENST00000428842 SPATA24Q86W54 205 aa8.85□□□□□ -0.99
HMGCLL1-206ENST00000428842 IL22RA1Q8N6P7 574 aa8.85□□□□□ -0.99
HMGCLL1-206ENST00000428842 SLC2A12Q8TD20 617 aa8.85□□□□□ -0.99
HMGCLL1-206ENST00000428842 SLC38A5Q8WUX1 472 aa8.85□□□□□ -0.99
HMGCLL1-206ENST00000428842 OR5P2Q8WZ92 322 aa8.85□□□□□ -0.99
HMGCLL1-206ENST00000428842 TANKQ92844 425 aa8.85□□□□□ -0.99
HMGCLL1-206ENST00000428842 EFHD2Q96C19 240 aaPredicted RBP8.85□□□□□ -0.99
HMGCLL1-206ENST00000428842 WDR77Q9BQA1 342 aaPredicted RBP8.85□□□□□ -0.99
HMGCLL1-206ENST00000428842 ITPAQ9BY32 194 aa8.85□□□□□ -0.99
HMGCLL1-206ENST00000428842 SPRY4Q9C004 299 aa8.85□□□□□ -0.99
HMGCLL1-206ENST00000428842 ROGDIQ9GZN7 287 aa8.85□□□□□ -0.99
HMGCLL1-206ENST00000428842 IRF2BPLQ9H1B7 796 aa8.85□□□□□ -0.99
HMGCLL1-206ENST00000428842 ZNF696Q9H7X3 374 aa8.85□□□□□ -0.99
HMGCLL1-206ENST00000428842 ASCL3Q9NQ33 180 aa8.85□□□□□ -0.99
HMGCLL1-206ENST00000428842 PSME2Q9UL46 239 aa8.85□□□□□ -0.99
HMGCLL1-206ENST00000428842 PADI1Q9ULC6 663 aa8.85□□□□□ -0.99
HMGCLL1-206ENST00000428842 AP4B1Q9Y6B7 739 aa8.85□□□□□ -0.99
HMGCLL1-206ENST00000428842 CLCA3PQ9Y6N3 262 aa8.85□□□□□ -0.99
HMGCLL1-206ENST00000428842 USP24Q9UPU5 2620 aa8.84□□□□□ -0.99
HMGCLL1-206ENST00000428842 TCRBV16S1A1N1A0A5B0 115 aa8.84□□□□□ -0.99
HMGCLL1-206ENST00000428842 H0YJX3 145 aa8.84□□□□□ -0.99
HMGCLL1-206ENST00000428842 GUCY1B2O75343 617 aa8.84□□□□□ -0.99
HMGCLL1-206ENST00000428842 ATP1B1P05026 303 aa8.84□□□□□ -0.99
HMGCLL1-206ENST00000428842 MATN1P21941 496 aa8.84□□□□□ -0.99
HMGCLL1-206ENST00000428842 ILKQ13418 452 aa8.84□□□□□ -0.99
HMGCLL1-206ENST00000428842 CAMK2BQ13554 666 aa8.84□□□□□ -0.99
HMGCLL1-206ENST00000428842 TRIM25Q14258 630 aaKnown RBP8.84□□□□□ -0.99
HMGCLL1-206ENST00000428842 NDUFAF6Q330K2 333 aa8.84□□□□□ -0.99
HMGCLL1-206ENST00000428842 PRMT9Q6P2P2 845 aa8.84□□□□□ -0.99
HMGCLL1-206ENST00000428842 C6orf15Q6UXA7 325 aaPredicted RBP8.84□□□□□ -0.99
HMGCLL1-206ENST00000428842 ANKRD37Q7Z713 158 aa8.84□□□□□ -0.99
HMGCLL1-206ENST00000428842 C9orf40Q8IXQ3 194 aa8.84□□□□□ -0.99
HMGCLL1-206ENST00000428842 ZNF595Q8IYB9 648 aa8.84□□□□□ -0.99
HMGCLL1-206ENST00000428842 ZZZ3Q8IYH5 903 aa8.84□□□□□ -0.99
HMGCLL1-206ENST00000428842 MTERF3Q96E29 417 aa8.84□□□□□ -0.99
HMGCLL1-206ENST00000428842 OR7D2Q96RA2 312 aa8.84□□□□□ -0.99
HMGCLL1-206ENST00000428842 NPLQ9BXD5 320 aaPredicted RBP8.84□□□□□ -0.99
HMGCLL1-206ENST00000428842 AKAP7Q9P0M2 348 aaPredicted RBP8.84□□□□□ -0.99
HMGCLL1-206ENST00000428842 HS3ST3B1Q9Y662 390 aa8.84□□□□□ -0.99
HMGCLL1-206ENST00000428842 B4E171 279 aa8.84□□□□□ -0.99
HMGCLL1-206ENST00000428842 WWP2O00308 870 aa8.84□□□□□ -0.99
HMGCLL1-206ENST00000428842 PEX12O00623 359 aa8.84□□□□□ -0.99
HMGCLL1-206ENST00000428842 DNAJB5O75953 348 aa8.84□□□□□ -0.99
HMGCLL1-206ENST00000428842 ZNF682O95780 498 aa8.84□□□□□ -0.99
HMGCLL1-206ENST00000428842 CHRM4P08173 479 aa8.84□□□□□ -0.99
HMGCLL1-206ENST00000428842 SLC35E2P0CK97 266 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms