RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 VPS33AQ96AX1 596 aa13.45□□□□□ -0.26
SGCE-204ENST00000428696 C16orf58Q96GQ5 468 aa13.45□□□□□ -0.26
SGCE-204ENST00000428696 ZNF317Q96PQ6 595 aaPredicted RBP13.45□□□□□ -0.26
SGCE-204ENST00000428696 PHF12Q96QT6 1004 aa13.45□□□□□ -0.26
SGCE-204ENST00000428696 PANX1Q96RD7 426 aa13.45□□□□□ -0.26
SGCE-204ENST00000428696 RNF32Q9H0A6 362 aa13.45□□□□□ -0.26
SGCE-204ENST00000428696 TIMMDC1Q9NPL8 285 aa13.45□□□□□ -0.26
SGCE-204ENST00000428696 ANAPC2Q9UJX6 822 aa13.45□□□□□ -0.26
SGCE-204ENST00000428696 FAF1Q9UNN5 650 aaPredicted RBP13.45□□□□□ -0.26
SGCE-204ENST00000428696 NPFFR2Q9Y5X5 522 aa13.45□□□□□ -0.26
SGCE-204ENST00000428696 FAM208BQ5VWN6 2430 aa13.44□□□□□ -0.26
SGCE-204ENST00000428696 TLN1Q9Y490 2541 aaKnown RBP13.44□□□□□ -0.26
SGCE-204ENST00000428696 KALRNO60229 2985 aa13.44□□□□□ -0.26
SGCE-204ENST00000428696 SPTA1P02549 2419 aa13.44□□□□□ -0.26
SGCE-204ENST00000428696 FAM234BA2RU67 622 aa13.44□□□□□ -0.26
SGCE-204ENST00000428696 CCDC154A6NI56 674 aa13.44□□□□□ -0.26
SGCE-204ENST00000428696 CAPN14A8MX76 684 aa13.44□□□□□ -0.26
SGCE-204ENST00000428696 B8ZZF3 427 aa13.44□□□□□ -0.26
SGCE-204ENST00000428696 RNASET2O00584 256 aaKnown RBP13.44□□□□□ -0.26
SGCE-204ENST00000428696 NEURL1O76050 574 aa13.44□□□□□ -0.26
SGCE-204ENST00000428696 ANP32DO95626 131 aa13.44□□□□□ -0.26
SGCE-204ENST00000428696 GSNP06396 782 aa13.44□□□□□ -0.26
SGCE-204ENST00000428696 TRHRP34981 398 aaPredicted RBP13.44□□□□□ -0.26
SGCE-204ENST00000428696 CHI3L1P36222 383 aaPredicted RBP13.44□□□□□ -0.26
SGCE-204ENST00000428696 CASP9P55211 416 aa13.44□□□□□ -0.26
SGCE-204ENST00000428696 WNT3P56703 355 aa13.44□□□□□ -0.26
SGCE-204ENST00000428696 FBXW4P57775 412 aa13.44□□□□□ -0.26
SGCE-204ENST00000428696 GPR85P60893 370 aa13.44□□□□□ -0.26
SGCE-204ENST00000428696 PLCXD2Q0VAA5 305 aa13.44□□□□□ -0.26
SGCE-204ENST00000428696 MLC1Q15049 377 aa13.44□□□□□ -0.26
SGCE-204ENST00000428696 C6orf10Q5SRN2 563 aa13.44□□□□□ -0.26
SGCE-204ENST00000428696 CGB2Q6NT52 195 aa13.44□□□□□ -0.26
SGCE-204ENST00000428696 RTL4Q6ZR62 310 aa13.44□□□□□ -0.26
SGCE-204ENST00000428696 GALNTL5Q7Z4T8 443 aa13.44□□□□□ -0.26
SGCE-204ENST00000428696 CAMKMTQ7Z624 323 aa13.44□□□□□ -0.26
SGCE-204ENST00000428696 ARMC10Q8N2F6 343 aa13.44□□□□□ -0.26
SGCE-204ENST00000428696 SLC15A4Q8N697 577 aa13.44□□□□□ -0.26
SGCE-204ENST00000428696 FAM120BQ96EK7 910 aaKnown RBP13.44□□□□□ -0.26
SGCE-204ENST00000428696 INPP5KQ9BT40 448 aa13.44□□□□□ -0.26
SGCE-204ENST00000428696 NSRP1Q9H0G5 558 aaKnown RBP13.44□□□□□ -0.26
SGCE-204ENST00000428696 FAM120CQ9NX05 1096 aaKnown RBP13.44□□□□□ -0.26
SGCE-204ENST00000428696 METRNQ9UJH8 293 aa13.44□□□□□ -0.26
SGCE-204ENST00000428696 GPR55Q9Y2T6 319 aaPredicted RBP13.44□□□□□ -0.26
SGCE-204ENST00000428696 RNF103-CHMP3A0A140T963 221 aa13.43□□□□□ -0.26
SGCE-204ENST00000428696 RFXANKO14593 260 aa13.43□□□□□ -0.26
SGCE-204ENST00000428696 RASAL1O95294 804 aa13.43□□□□□ -0.26
SGCE-204ENST00000428696 P04436 131 aa13.43□□□□□ -0.26
SGCE-204ENST00000428696 ABCD3P28288 659 aa13.43□□□□□ -0.26
SGCE-204ENST00000428696 SQLEQ14534 574 aa13.43□□□□□ -0.26
SGCE-204ENST00000428696 LASP1Q14847 261 aaKnown RBP13.43□□□□□ -0.26
SGCE-204ENST00000428696 VPS26BQ4G0F5 336 aa13.43□□□□□ -0.26
SGCE-204ENST00000428696 DNAJC14Q6Y2X3 702 aaPredicted RBP13.43□□□□□ -0.26
SGCE-204ENST00000428696 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.43□□□□□ -0.26
SGCE-204ENST00000428696 GPALPP1Q8IXQ4 340 aa13.43□□□□□ -0.26
SGCE-204ENST00000428696 TMEM178AQ8NBL3 297 aa13.43□□□□□ -0.26
SGCE-204ENST00000428696 MDS2Q8NDY4 140 aa13.43□□□□□ -0.26
SGCE-204ENST00000428696 OR10G3Q8NGC4 313 aa13.43□□□□□ -0.26
SGCE-204ENST00000428696 OR4N2Q8NGD1 307 aa13.43□□□□□ -0.26
SGCE-204ENST00000428696 TMBIM1Q969X1 311 aa13.43□□□□□ -0.26
SGCE-204ENST00000428696 OMA1Q96E52 524 aa13.43□□□□□ -0.26
SGCE-204ENST00000428696 HSPBAP1Q96EW2 488 aa13.43□□□□□ -0.26
SGCE-204ENST00000428696 VSTM2LQ96N03 204 aa13.43□□□□□ -0.26
SGCE-204ENST00000428696 MS4A4EQ96PG1 132 aa13.43□□□□□ -0.26
SGCE-204ENST00000428696 ADOQ96SZ5 270 aa13.43□□□□□ -0.26
SGCE-204ENST00000428696 RMND5AQ9H871 391 aa13.43□□□□□ -0.26
SGCE-204ENST00000428696 NEUROD4Q9HD90 331 aa13.43□□□□□ -0.26
SGCE-204ENST00000428696 Q9N2J8 555 aa13.43□□□□□ -0.26
SGCE-204ENST00000428696 SIRT3Q9NTG7 399 aaPredicted RBP13.43□□□□□ -0.26
SGCE-204ENST00000428696 KLHL14Q9P2G3 628 aa13.43□□□□□ -0.26
SGCE-204ENST00000428696 FRG2CA6NGY1 282 aa13.42□□□□□ -0.26
SGCE-204ENST00000428696 TP53I11O14683 189 aa13.42□□□□□ -0.26
SGCE-204ENST00000428696 ACOX3O15254 700 aa13.42□□□□□ -0.26
SGCE-204ENST00000428696 SLC28A2O43868 658 aa13.42□□□□□ -0.26
SGCE-204ENST00000428696 C1QL1O75973 258 aa13.42□□□□□ -0.26
SGCE-204ENST00000428696 NADKO95544 446 aaPredicted RBP13.42□□□□□ -0.26
SGCE-204ENST00000428696 HMGN2P05204 90 aaKnown RBP13.42□□□□□ -0.26
SGCE-204ENST00000428696 ALOX5P09917 674 aa13.42□□□□□ -0.26
SGCE-204ENST00000428696 CT45A8P0DMV1 189 aa13.42□□□□□ -0.26
SGCE-204ENST00000428696 CT45A9P0DMV2 189 aa13.42□□□□□ -0.26
SGCE-204ENST00000428696 IL12BP29460 328 aa13.42□□□□□ -0.26
SGCE-204ENST00000428696 RFC3P40938 356 aa13.42□□□□□ -0.26
SGCE-204ENST00000428696 PRIM2P49643 509 aa13.42□□□□□ -0.26
SGCE-204ENST00000428696 TMED10P49755 219 aaKnown RBP13.42□□□□□ -0.26
SGCE-204ENST00000428696 PMP22Q01453 160 aa13.42□□□□□ -0.26
SGCE-204ENST00000428696 GAB1Q13480 694 aa13.42□□□□□ -0.26
SGCE-204ENST00000428696 ZNF791Q3KP31 576 aaPredicted RBP13.42□□□□□ -0.26
SGCE-204ENST00000428696 PRR30Q53SZ7 412 aaPredicted RBP13.42□□□□□ -0.26
SGCE-204ENST00000428696 CT45A2Q5DJT8 189 aa13.42□□□□□ -0.26
SGCE-204ENST00000428696 PRAMEF20Q5VT98 475 aa13.42□□□□□ -0.26
SGCE-204ENST00000428696 METTL21CQ5VZV1 264 aa13.42□□□□□ -0.26
SGCE-204ENST00000428696 SLC22A10Q63ZE4 541 aa13.42□□□□□ -0.26
SGCE-204ENST00000428696 BHLHB9Q6PI77 547 aa13.42□□□□□ -0.26
SGCE-204ENST00000428696 NPSR1Q6W5P4 371 aa13.42□□□□□ -0.26
SGCE-204ENST00000428696 C6orf120Q7Z4R8 191 aa13.42□□□□□ -0.26
SGCE-204ENST00000428696 SPATA21Q7Z572 469 aa13.42□□□□□ -0.26
SGCE-204ENST00000428696 GALNT10Q86SR1 603 aa13.42□□□□□ -0.26
SGCE-204ENST00000428696 ZNF441Q8N8Z8 693 aa13.42□□□□□ -0.26
SGCE-204ENST00000428696 Q8NA96 180 aa13.42□□□□□ -0.26
SGCE-204ENST00000428696 OR56A1Q8NGH5 318 aa13.42□□□□□ -0.26
SGCE-204ENST00000428696 PIK3R3Q92569 461 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms