RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 SLC25A27O95847 323 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 S100A8P05109 93 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 IGFBP6P24592 240 aaPredicted RBP4.85□□□□□ -1.63
RIF1-203ENST00000428287 AOAHP28039 575 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 DGKGP49619 791 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 CDK5Q00535 292 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 SF1Q15637 639 aaKnown RBP4.85□□□□□ -1.63
RIF1-203ENST00000428287 GUCA2BQ16661 112 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 TCEANCQ8N8B7 351 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 SCAMP5Q8TAC9 235 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 ASB11Q8WXH4 323 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 CMTM3Q96MX0 182 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 LINC00052Q96N35 136 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 FAIM2Q9BWQ8 316 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 RBCK1Q9BYM8 510 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 TAS2R5Q9NYW4 299 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 GPRC5BQ9NZH0 403 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 ZNF224Q9NZL3 707 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 OR2M5A3KFT3 312 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 C2orf78A6NCI8 922 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 MYO1GB0I1T2 1018 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 SMLR1H3BR10 107 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 F2P00734 622 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 HPP00738 406 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 IL5P05113 134 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 SMIM6P0DI80 62 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 LAMP1P11279 417 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 ETFAP13804 333 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 AVPR1BP47901 424 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 ACLYP53396 1101 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 MRPL28Q13084 256 aaKnown RBP4.85□□□□□ -1.63
RIF1-203ENST00000428287 OPCMLQ14982 345 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 RGNQ15493 299 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 MINDY4Q4G0A6 757 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 XKR6Q5GH73 641 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 TRIM40Q6P9F5 258 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 NPAS3Q8IXF0 933 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 CPXM2Q8N436 756 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 GNPDA2Q8TDQ7 276 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 TMEM40Q8WWA1 233 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 INTS12Q96CB8 462 aaKnown RBP4.85□□□□□ -1.63
RIF1-203ENST00000428287 THAP7Q9BT49 309 aaPredicted RBP4.85□□□□□ -1.63
RIF1-203ENST00000428287 C1QTNF6Q9BXI9 259 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 RNF122Q9H9V4 155 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 GOLGA2P5Q9HBQ8 144 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 ADARB2Q9NS39 739 aaKnown RBP4.85□□□□□ -1.63
RIF1-203ENST00000428287 NDRG3Q9UGV2 375 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 TRIOBPQ9H2D6 2365 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 MANBAO00462 879 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 SRPRAP08240 638 aaKnown RBP4.85□□□□□ -1.63
RIF1-203ENST00000428287 PRSS56P0CW18 603 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 ACP2P11117 423 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 POU1F1P28069 291 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 DLX5P56178 289 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 MS4A13Q5J8X5 152 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 NBPF12Q5TAG4 269 aaPredicted RBP4.85□□□□□ -1.63
RIF1-203ENST00000428287 LIPJQ5W064 366 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 FBXL22Q6P050 247 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 C17orf107Q6ZR85 190 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 HUS1BQ8NHY5 278 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 SFT2D1Q8WV19 159 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 NXPE3Q969Y0 559 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 RFT1Q96AA3 541 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 LYSMD1Q96S90 227 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 CNPPD1Q9BV87 410 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 OSGEPL1Q9H4B0 414 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 ZFR2Q9UPR6 939 aaKnown RBP4.85□□□□□ -1.63
RIF1-203ENST00000428287 HIVEP2P31629 2446 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 ZNF749O43361 778 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 B3GALT4O96024 378 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 GP1BAP07359 652 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 NUDT7P0C024 238 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 PIRTP0C851 137 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 CBSLP0DN79 551 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 CBSP35520 551 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 ITKQ08881 620 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 SNTB2Q13425 540 aaKnown RBP4.85□□□□□ -1.63
RIF1-203ENST00000428287 PYDC2Q56P42 97 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 NAGSQ8N159 534 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 HORMAD2Q8N7B1 307 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 TRPV1Q8NER1 839 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 SPPL2AQ8TCT8 520 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 APIPQ96GX9 242 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 LRR1Q96L50 414 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 TEFMQ96QE5 360 aaKnown RBP4.85□□□□□ -1.63
RIF1-203ENST00000428287 SMG9Q9H0W8 520 aaKnown RBP4.85□□□□□ -1.63
RIF1-203ENST00000428287 AKT3Q9Y243 479 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 EIF4E2O60573 245 aaKnown RBP4.85□□□□□ -1.63
RIF1-203ENST00000428287 TLR5O60602 858 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 GIPP09681 153 aaPredicted RBP4.85□□□□□ -1.63
RIF1-203ENST00000428287 HIST1H2AGP0C0S8 130 aaPredicted RBP4.85□□□□□ -1.63
RIF1-203ENST00000428287 CELP19835 753 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 HIST1H2ADP20671 130 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 S100A11P31949 105 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 GDF5P43026 501 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 HEPACAMQ14CZ8 416 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 POU4F3Q15319 338 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 NTRK2Q16620 822 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 TMEM44Q2T9K0 475 aa4.85□□□□□ -1.63
RIF1-203ENST00000428287 ZNF648Q5T619 568 aaPredicted RBP4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms