RNA–Protein interactions for RNA: ENST00000427660.6

NUDCD1-202, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene NUDCD1, Length 2,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-202ENST00000427660 CAVIN2O95810 425 aa3.99□□□□□ -1.77
NUDCD1-202ENST00000427660 MBD3O95983 291 aa3.99□□□□□ -1.77
NUDCD1-202ENST00000427660 CLPTM1O96005 669 aa3.99□□□□□ -1.77
NUDCD1-202ENST00000427660 GSTA1P08263 222 aa3.99□□□□□ -1.77
NUDCD1-202ENST00000427660 SLC35G4P0C7Q5 338 aa3.99□□□□□ -1.77
NUDCD1-202ENST00000427660 MAT2AP31153 395 aaKnown RBP3.99□□□□□ -1.77
NUDCD1-202ENST00000427660 CNTN2Q02246 1040 aa3.99□□□□□ -1.77
NUDCD1-202ENST00000427660 EFTUD2Q15029 972 aaKnown RBP eCLIP3.99□□□□□ -1.77
NUDCD1-202ENST00000427660 TAB1Q15750 504 aa3.99□□□□□ -1.77
NUDCD1-202ENST00000427660 ZNF699Q32M78 642 aa3.99□□□□□ -1.77
NUDCD1-202ENST00000427660 PMF1Q6P1K2 205 aa3.99□□□□□ -1.77
NUDCD1-202ENST00000427660 LINC00518Q8N0U6 118 aa3.99□□□□□ -1.77
NUDCD1-202ENST00000427660 KBTBD3Q8NAB2 608 aa3.99□□□□□ -1.77
NUDCD1-202ENST00000427660 NFAM1Q8NET5 270 aaPredicted RBP3.99□□□□□ -1.77
NUDCD1-202ENST00000427660 OR5AU1Q8NGC0 362 aa3.99□□□□□ -1.77
NUDCD1-202ENST00000427660 TRMT10AQ8TBZ6 339 aaKnown RBP3.99□□□□□ -1.77
NUDCD1-202ENST00000427660 RAET1EQ8TD07 263 aa3.99□□□□□ -1.77
NUDCD1-202ENST00000427660 MRPL24Q96A35 216 aaKnown RBP3.99□□□□□ -1.77
NUDCD1-202ENST00000427660 TPD52L3Q96J77 140 aa3.99□□□□□ -1.77
NUDCD1-202ENST00000427660 LRR1Q96L50 414 aa3.99□□□□□ -1.77
NUDCD1-202ENST00000427660 C1QTNF4Q9BXJ3 329 aa3.99□□□□□ -1.77
NUDCD1-202ENST00000427660 CAPS2Q9BXY5 557 aa3.99□□□□□ -1.77
NUDCD1-202ENST00000427660 GCOM2Q9BZD3 368 aaPredicted RBP3.99□□□□□ -1.77
NUDCD1-202ENST00000427660 ATP13A3Q9H7F0 1226 aa3.99□□□□□ -1.77
NUDCD1-202ENST00000427660 RBM28Q9NW13 759 aaKnown RBP3.99□□□□□ -1.77
NUDCD1-202ENST00000427660 TAAR2Q9P1P5 351 aa3.99□□□□□ -1.77
NUDCD1-202ENST00000427660 TUBGCP4Q9UGJ1 667 aa3.99□□□□□ -1.77
NUDCD1-202ENST00000427660 DDX19BQ9UMR2 479 aa3.99□□□□□ -1.77
NUDCD1-202ENST00000427660 RNF6Q9Y252 685 aa3.99□□□□□ -1.77
NUDCD1-202ENST00000427660 CTAGE15A4D2H0 777 aa3.98□□□□□ -1.77
NUDCD1-202ENST00000427660 ANHXE9PGG2 379 aa3.98□□□□□ -1.77
NUDCD1-202ENST00000427660 NPIPA2E9PIF3 369 aa3.98□□□□□ -1.77
NUDCD1-202ENST00000427660 CFLARO15519 480 aa3.98□□□□□ -1.77
NUDCD1-202ENST00000427660 JAK2O60674 1132 aa3.98□□□□□ -1.77
NUDCD1-202ENST00000427660 BCAS1O75363 584 aaPredicted RBP3.98□□□□□ -1.77
NUDCD1-202ENST00000427660 ANXA9O76027 345 aa3.98□□□□□ -1.77
NUDCD1-202ENST00000427660 NGFRP08138 427 aa3.98□□□□□ -1.77
NUDCD1-202ENST00000427660 UQCRBP14927 111 aa3.98□□□□□ -1.77
NUDCD1-202ENST00000427660 MYOGP15173 224 aa3.98□□□□□ -1.77
NUDCD1-202ENST00000427660 CCNCP24863 283 aa3.98□□□□□ -1.77
NUDCD1-202ENST00000427660 TAGLN2P37802 199 aaKnown RBP3.98□□□□□ -1.77
NUDCD1-202ENST00000427660 SGSHP51688 502 aa3.98□□□□□ -1.77
NUDCD1-202ENST00000427660 BTG1P62324 171 aa3.98□□□□□ -1.77
NUDCD1-202ENST00000427660 RPS4XP62701 263 aaKnown RBP3.98□□□□□ -1.77
NUDCD1-202ENST00000427660 NUCB2P80303 420 aa3.98□□□□□ -1.77
NUDCD1-202ENST00000427660 ILF3Q12906 894 aaKnown RBP eCLIP3.98□□□□□ -1.77
NUDCD1-202ENST00000427660 TEAD2Q15562 447 aa3.98□□□□□ -1.77
NUDCD1-202ENST00000427660 CDKN3Q16667 212 aa3.98□□□□□ -1.77
NUDCD1-202ENST00000427660 HKDC1Q2TB90 917 aa3.98□□□□□ -1.77
NUDCD1-202ENST00000427660 RABGAP1LQ5R372 815 aa3.98□□□□□ -1.77
NUDCD1-202ENST00000427660 TTC23Q5W5X9 447 aa3.98□□□□□ -1.77
NUDCD1-202ENST00000427660 RBMS3Q6XE24 437 aaKnown RBP3.98□□□□□ -1.77
NUDCD1-202ENST00000427660 P4HA3Q7Z4N8 544 aa3.98□□□□□ -1.77
NUDCD1-202ENST00000427660 CTAGE6Q86UF2 777 aa3.98□□□□□ -1.77
NUDCD1-202ENST00000427660 EFCAB13Q8IY85 973 aa3.98□□□□□ -1.77
NUDCD1-202ENST00000427660 DCLK2Q8N568 766 aa3.98□□□□□ -1.77
NUDCD1-202ENST00000427660 BHLHE23Q8NDY6 225 aa3.98□□□□□ -1.77
NUDCD1-202ENST00000427660 KLHDC9Q8NEP7 349 aa3.98□□□□□ -1.77
NUDCD1-202ENST00000427660 OR2T11Q8NH01 316 aa3.98□□□□□ -1.77
NUDCD1-202ENST00000427660 PNPT1Q8TCS8 783 aaKnown RBP3.98□□□□□ -1.77
NUDCD1-202ENST00000427660 TM9SF4Q92544 642 aa3.98□□□□□ -1.77
NUDCD1-202ENST00000427660 EMG1Q92979 244 aaKnown RBP3.98□□□□□ -1.77
NUDCD1-202ENST00000427660 DHTKD1Q96HY7 919 aaPredicted RBP3.98□□□□□ -1.77
NUDCD1-202ENST00000427660 ZNF479Q96JC4 524 aa3.98□□□□□ -1.77
NUDCD1-202ENST00000427660 CAPNS2Q96L46 248 aa3.98□□□□□ -1.77
NUDCD1-202ENST00000427660 UHRF2Q96PU4 802 aa3.98□□□□□ -1.77
NUDCD1-202ENST00000427660 MRIQ9BWK5 157 aa3.98□□□□□ -1.77
NUDCD1-202ENST00000427660 PINK1Q9BXM7 581 aa3.98□□□□□ -1.77
NUDCD1-202ENST00000427660 KRTAP4-9Q9BYQ8 210 aa3.98□□□□□ -1.77
NUDCD1-202ENST00000427660 CRNKL1Q9BZJ0 848 aaKnown RBP3.98□□□□□ -1.77
NUDCD1-202ENST00000427660 PLCL2Q9UPR0 1127 aa3.98□□□□□ -1.77
NUDCD1-202ENST00000427660 RNF215Q9Y6U7 377 aa3.98□□□□□ -1.77
NUDCD1-202ENST00000427660 ADAMTSL3P82987 1691 aa3.98□□□□□ -1.77
NUDCD1-202ENST00000427660 RGPD1P0DJD0 1748 aa3.98□□□□□ -1.77
NUDCD1-202ENST00000427660 CD163L1Q9NR16 1453 aa3.98□□□□□ -1.77
NUDCD1-202ENST00000427660 KIAA0232Q92628 1395 aa3.98□□□□□ -1.77
NUDCD1-202ENST00000427660 LOC105371242A0A075B767 164 aa3.98□□□□□ -1.77
NUDCD1-202ENST00000427660 A0A0U1RQS6 177 aa3.98□□□□□ -1.77
NUDCD1-202ENST00000427660 GSAPA4D1B5 854 aa3.98□□□□□ -1.77
NUDCD1-202ENST00000427660 SURF4O15260 269 aa3.98□□□□□ -1.77
NUDCD1-202ENST00000427660 CTAGE5O15320 804 aa3.98□□□□□ -1.77
NUDCD1-202ENST00000427660 SIGLEC5O15389 551 aa3.98□□□□□ -1.77
NUDCD1-202ENST00000427660 DCXO43602 365 aa3.98□□□□□ -1.77
NUDCD1-202ENST00000427660 NGFP01138 241 aa3.98□□□□□ -1.77
NUDCD1-202ENST00000427660 SOX3P41225 446 aa3.98□□□□□ -1.77
NUDCD1-202ENST00000427660 AIF1P55008 147 aa3.98□□□□□ -1.77
NUDCD1-202ENST00000427660 ATP5IP56385 69 aaPredicted RBP3.98□□□□□ -1.77
NUDCD1-202ENST00000427660 ABCE1P61221 599 aaKnown RBP3.98□□□□□ -1.77
NUDCD1-202ENST00000427660 KIAA1644Q3SXP7 199 aa3.98□□□□□ -1.77
NUDCD1-202ENST00000427660 LINC01620Q4KN68 170 aa3.98□□□□□ -1.77
NUDCD1-202ENST00000427660 ARHGAP11AQ6P4F7 1023 aa3.98□□□□□ -1.77
NUDCD1-202ENST00000427660 BLOC1S2Q6QNY1 142 aa3.98□□□□□ -1.77
NUDCD1-202ENST00000427660 C1QL2Q7Z5L3 287 aa3.98□□□□□ -1.77
NUDCD1-202ENST00000427660 TRPT1Q86TN4 253 aaKnown RBP3.98□□□□□ -1.77
NUDCD1-202ENST00000427660 SPRYD4Q8WW59 207 aaPredicted RBP3.98□□□□□ -1.77
NUDCD1-202ENST00000427660 CD101Q93033 1021 aa3.98□□□□□ -1.77
NUDCD1-202ENST00000427660 AZIN2Q96A70 460 aa3.98□□□□□ -1.77
NUDCD1-202ENST00000427660 MED30Q96HR3 178 aa3.98□□□□□ -1.77
NUDCD1-202ENST00000427660 C2orf48Q96LS8 159 aa3.98□□□□□ -1.77
NUDCD1-202ENST00000427660 PLIN2Q99541 437 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms