RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 OR12D3Q9UGF7 316 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 TRPS1Q9UHF7 1281 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 FBXL4Q9UKA2 621 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 MRTO4Q9UKD2 239 aaKnown RBP5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 FBXL3Q9UKT7 428 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 RUVBL1Q9Y265 456 aaKnown RBP5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 PCYT1BQ9Y5K3 369 aaPredicted RBP5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 SPIN1Q9Y657 262 aaPredicted RBP5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 TAF1P21675 1872 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 FNDC1Q4ZHG4 1894 aaPredicted RBP5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 ELOA3CA0A087WX78 387 aaPredicted RBP5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 MTMR11A4FU01 709 aa5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 GLTPD2A6NH11 291 aa5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 FAM74A7A6NL05 159 aa5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 OR6C75A6NL08 312 aa5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 ANXA2P2A6NMY6 339 aa5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 EFCAB7A8K855 629 aa5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 MAGEB17A8MXT2 336 aa5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 F5H5P2 479 aa5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 LINC01387J3KSC0 135 aa5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 M0QZK8 103 aa5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 AP4M1O00189 453 aa5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 GFRA2O00451 464 aa5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 FAAHO00519 579 aa5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 SUSD5O60279 629 aa5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 PEX10O60683 326 aa5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 GALR3O60755 368 aaPredicted RBP5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 DNAJB6O75190 326 aa5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 GGCTO75223 188 aaKnown RBP5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 ULK1O75385 1050 aa5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 PAGE1O75459 146 aa5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 POP7O75817 140 aaKnown RBP5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 RBBP9O75884 186 aa5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 RGS9O75916 674 aaPredicted RBP5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 SOD1P00441 154 aa5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 IGHA2P01877 340 aa5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 F11P03951 625 aa5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 IL3P08700 152 aa5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 HOXC4P09017 264 aaPredicted RBP5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 LINC00614P0C842 121 aa5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 CLUP10909 449 aa5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 BCKDHAP12694 445 aa5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 OSMP13725 252 aa5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 EPB42P16452 691 aa5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 TPH1P17752 444 aa5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 GPX2P18283 190 aa5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 ATF3P18847 181 aa5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 ANXA7P20073 488 aaKnown RBP5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 PSMB1P20618 241 aaKnown RBP5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 CRABP1P29762 137 aa5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 SDHAP31040 664 aa5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 CCR7P32248 378 aa5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 IRS1P35568 1242 aa5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 ARL2P36404 184 aa5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 IFNGR2P38484 337 aa5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 CAP2P40123 477 aa5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 SOX3P41225 446 aa5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 PTGFRP43088 359 aa5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 CRATP43155 626 aa5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 GLP1RP43220 463 aa5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 KIR3DL1P43629 444 aa5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 CRKLP46109 303 aaKnown RBP5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 RPL34P49207 117 aaKnown RBP5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 POU3F4P49335 361 aa5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 RGS19P49795 217 aa5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 RENBPP51606 427 aa5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 SUCLG1P53597 346 aaKnown RBP5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 CLDN8P56748 225 aa5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 NRG3P56975 720 aa5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 IL2P60568 153 aa5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 RAB8AP61006 207 aa5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 ACTR1AP61163 376 aa5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 WDR5P61964 334 aaKnown RBP5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 HNRNPKP61978 463 aaKnown RBP eCLIP5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 RPS14P62263 151 aaKnown RBP5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 RPL38P63173 70 aaKnown RBP5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 SKP1P63208 163 aa5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 ACY1Q03154 408 aa5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 TMEM115Q12893 351 aaPredicted RBP5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 DUSP4Q13115 394 aa5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 GTF2H2Q13888 395 aa5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 BAATQ14032 418 aaPredicted RBP5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 LRRC32Q14392 662 aa5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 ZNF460Q14592 562 aa5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 PTGES3Q15185 160 aaKnown RBP5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 PTPRRQ15256 657 aa5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 PCBP2Q15366 365 aaKnown RBP eCLIP5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 SUPT20HL1Q3ZLR7 823 aa5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 FAM74A3Q4VXF1 159 aa5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 CARD16Q5EG05 197 aa5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 SAPCD1Q5SSQ6 148 aa5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 C10orf91Q5T1B1 145 aa5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 RAET1GQ6H3X3 334 aa5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 GTF2H2CQ6P1K8 395 aa5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 ALKAL2Q6UX46 152 aa5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 MOB3CQ70IA8 216 aa5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 HIST2H3AQ71DI3 136 aa5.31□□□□□ -1.56
VTI1BP4-201ENST00000427516 DCXRQ7Z4W1 244 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms