RNA–Protein interactions for RNA: ENST00000424846.3

TPM3P9-201, Transcript of tropomyosin 3 pseudogene 9, humanhuman

TSL 1 (best) BASIC

Gene TPM3P9, Length 2,920 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P9-201ENST00000424846 CHRNB1P11230 501 aa13.35□□□□□ -0.27
TPM3P9-201ENST00000424846 AGFG1P52594 562 aaKnown RBP13.35□□□□□ -0.27
TPM3P9-201ENST00000424846 ALDH6A1Q02252 535 aaKnown RBP13.35□□□□□ -0.27
TPM3P9-201ENST00000424846 LCTLQ6UWM7 567 aa13.35□□□□□ -0.27
TPM3P9-201ENST00000424846 KRT78Q8N1N4 520 aa13.35□□□□□ -0.27
TPM3P9-201ENST00000424846 OR4M1Q8NGD0 313 aa13.35□□□□□ -0.27
TPM3P9-201ENST00000424846 TMEM163Q8TC26 289 aa13.35□□□□□ -0.27
TPM3P9-201ENST00000424846 JPH3Q8WXH2 748 aaPredicted RBP13.35□□□□□ -0.27
TPM3P9-201ENST00000424846 TFGQ92734 400 aaPredicted RBP13.35□□□□□ -0.27
TPM3P9-201ENST00000424846 AMDHD1Q96NU7 426 aa13.35□□□□□ -0.27
TPM3P9-201ENST00000424846 SOSTQ9BQB4 213 aa13.35□□□□□ -0.27
TPM3P9-201ENST00000424846 GALNT9Q9HCQ5 603 aa13.35□□□□□ -0.27
TPM3P9-201ENST00000424846 SCN3AQ9NY46 2000 aa13.34□□□□□ -0.27
TPM3P9-201ENST00000424846 PRODHO43272 600 aa13.34□□□□□ -0.27
TPM3P9-201ENST00000424846 LATO43561 262 aa13.34□□□□□ -0.27
TPM3P9-201ENST00000424846 OR1F1O43749 312 aa13.34□□□□□ -0.27
TPM3P9-201ENST00000424846 PLOD3O60568 738 aa13.34□□□□□ -0.27
TPM3P9-201ENST00000424846 ERAL1O75616 437 aaKnown RBP13.34□□□□□ -0.27
TPM3P9-201ENST00000424846 TRAPPC2P0DI81 140 aa13.34□□□□□ -0.27
TPM3P9-201ENST00000424846 TRAPPC2BP0DI82 140 aa13.34□□□□□ -0.27
TPM3P9-201ENST00000424846 DDX5P17844 614 aaKnown RBP13.34□□□□□ -0.27
TPM3P9-201ENST00000424846 CELP19835 753 aa13.34□□□□□ -0.27
TPM3P9-201ENST00000424846 NNMTP40261 264 aa13.34□□□□□ -0.27
TPM3P9-201ENST00000424846 HTR2BP41595 481 aa13.34□□□□□ -0.27
TPM3P9-201ENST00000424846 MLLT3P42568 568 aaPredicted RBP13.34□□□□□ -0.27
TPM3P9-201ENST00000424846 IL18Q14116 193 aa13.34□□□□□ -0.27
TPM3P9-201ENST00000424846 CLPPQ16740 277 aaPredicted RBP13.34□□□□□ -0.27
TPM3P9-201ENST00000424846 LCN1P1Q5VSP4 162 aa13.34□□□□□ -0.27
TPM3P9-201ENST00000424846 KIAA1161Q6NSJ0 714 aa13.34□□□□□ -0.27
TPM3P9-201ENST00000424846 PLET1Q6UQ28 207 aa13.34□□□□□ -0.27
TPM3P9-201ENST00000424846 FAM92BQ6ZTR7 304 aa13.34□□□□□ -0.27
TPM3P9-201ENST00000424846 KIAA0907Q7Z7F0 614 aaPredicted RBP13.34□□□□□ -0.27
TPM3P9-201ENST00000424846 IL17RCQ8NAC3 791 aa13.34□□□□□ -0.27
TPM3P9-201ENST00000424846 GALNT6Q8NCL4 622 aa13.34□□□□□ -0.27
TPM3P9-201ENST00000424846 OR7G1Q8NGA0 311 aa13.34□□□□□ -0.27
TPM3P9-201ENST00000424846 OR4Q3Q8NH05 313 aa13.34□□□□□ -0.27
TPM3P9-201ENST00000424846 OR2L2Q8NH16 312 aa13.34□□□□□ -0.27
TPM3P9-201ENST00000424846 ING5Q8WYH8 240 aa13.34□□□□□ -0.27
TPM3P9-201ENST00000424846 ARHGAP9Q9BRR9 750 aa13.34□□□□□ -0.27
TPM3P9-201ENST00000424846 LGR4Q9BXB1 951 aa13.34□□□□□ -0.27
TPM3P9-201ENST00000424846 RNF32Q9H0A6 362 aa13.34□□□□□ -0.27
TPM3P9-201ENST00000424846 CHST2Q9Y4C5 530 aa13.34□□□□□ -0.27
TPM3P9-201ENST00000424846 A0A1W2PPV9 198 aa13.34□□□□□ -0.27
TPM3P9-201ENST00000424846 STK25O00506 426 aa13.34□□□□□ -0.27
TPM3P9-201ENST00000424846 TRHRP34981 398 aaPredicted RBP13.34□□□□□ -0.27
TPM3P9-201ENST00000424846 FAPQ12884 760 aa13.34□□□□□ -0.27
TPM3P9-201ENST00000424846 FZD5Q13467 585 aa13.34□□□□□ -0.27
TPM3P9-201ENST00000424846 ENTPD8Q5MY95 495 aa13.34□□□□□ -0.27
TPM3P9-201ENST00000424846 NDUFAF5Q5TEU4 345 aa13.34□□□□□ -0.27
TPM3P9-201ENST00000424846 IL20RBQ6UXL0 311 aa13.34□□□□□ -0.27
TPM3P9-201ENST00000424846 VRK2Q86Y07 508 aa13.34□□□□□ -0.27
TPM3P9-201ENST00000424846 CACUL1Q86Y37 369 aa13.34□□□□□ -0.27
TPM3P9-201ENST00000424846 MARCH9Q86YJ5 346 aa13.34□□□□□ -0.27
TPM3P9-201ENST00000424846 LINC01555Q8NAE3 123 aa13.34□□□□□ -0.27
TPM3P9-201ENST00000424846 SETD7Q8WTS6 366 aaKnown RBP13.34□□□□□ -0.27
TPM3P9-201ENST00000424846 UFD1Q92890 307 aa13.34□□□□□ -0.27
TPM3P9-201ENST00000424846 UBE2E3Q969T4 207 aa13.34□□□□□ -0.27
TPM3P9-201ENST00000424846 ZNF649Q9BS31 505 aa13.34□□□□□ -0.27
TPM3P9-201ENST00000424846 ZBP1Q9H171 429 aa13.34□□□□□ -0.27
TPM3P9-201ENST00000424846 RHBGQ9H310 441 aa13.34□□□□□ -0.27
TPM3P9-201ENST00000424846 EPHX3Q9H6B9 360 aa13.34□□□□□ -0.27
TPM3P9-201ENST00000424846 SYNPO2LQ9H987 977 aa13.34□□□□□ -0.27
TPM3P9-201ENST00000424846 FGF20Q9NP95 211 aaPredicted RBP13.34□□□□□ -0.27
TPM3P9-201ENST00000424846 EQTNQ9NQ60 294 aa13.34□□□□□ -0.27
TPM3P9-201ENST00000424846 SEMA4GQ9NTN9 838 aa13.34□□□□□ -0.27
TPM3P9-201ENST00000424846 AHSPQ9NZD4 102 aa13.34□□□□□ -0.27
TPM3P9-201ENST00000424846 DKK3Q9UBP4 350 aa13.34□□□□□ -0.27
TPM3P9-201ENST00000424846 ZC3H12DA2A288 527 aaKnown RBP13.33□□□□□ -0.27
TPM3P9-201ENST00000424846 FAM183AA6NL82 134 aa13.33□□□□□ -0.27
TPM3P9-201ENST00000424846 HIDE1A8MVS5 230 aa13.33□□□□□ -0.27
TPM3P9-201ENST00000424846 NDUFS4O43181 175 aa13.33□□□□□ -0.27
TPM3P9-201ENST00000424846 LANCL1O43813 399 aa13.33□□□□□ -0.27
TPM3P9-201ENST00000424846 FGF18O76093 207 aa13.33□□□□□ -0.27
TPM3P9-201ENST00000424846 HMGN2P05204 90 aaKnown RBP13.33□□□□□ -0.27
TPM3P9-201ENST00000424846 GNSP15586 552 aa13.33□□□□□ -0.27
TPM3P9-201ENST00000424846 EVI2BP34910 448 aa13.33□□□□□ -0.27
TPM3P9-201ENST00000424846 SLC1A3P43003 542 aa13.33□□□□□ -0.27
TPM3P9-201ENST00000424846 NCBP2P52298 156 aaKnown RBP eCLIP13.33□□□□□ -0.27
TPM3P9-201ENST00000424846 SMSP52788 366 aa13.33□□□□□ -0.27
TPM3P9-201ENST00000424846 CHRNEQ04844 493 aa13.33□□□□□ -0.27
TPM3P9-201ENST00000424846 UBE3AQ05086 875 aa13.33□□□□□ -0.27
TPM3P9-201ENST00000424846 FAM209AQ5JX71 171 aa13.33□□□□□ -0.27
TPM3P9-201ENST00000424846 PIP5KL1Q5T9C9 394 aa13.33□□□□□ -0.27
TPM3P9-201ENST00000424846 CD300LDQ6UXZ3 194 aa13.33□□□□□ -0.27
TPM3P9-201ENST00000424846 NKAIN4Q8IVV8 208 aa13.33□□□□□ -0.27
TPM3P9-201ENST00000424846 ARIH2OSQ8N7S6 290 aa13.33□□□□□ -0.27
TPM3P9-201ENST00000424846 RAD51AP1Q96B01 352 aa13.33□□□□□ -0.27
TPM3P9-201ENST00000424846 ART5Q96L15 291 aa13.33□□□□□ -0.27
TPM3P9-201ENST00000424846 RIPOR3Q96MK2 946 aa13.33□□□□□ -0.27
TPM3P9-201ENST00000424846 MENTQ9BUN1 341 aa13.33□□□□□ -0.27
TPM3P9-201ENST00000424846 XKR8Q9H6D3 395 aa13.33□□□□□ -0.27
TPM3P9-201ENST00000424846 MCUBQ9NWR8 336 aa13.33□□□□□ -0.27
TPM3P9-201ENST00000424846 CHD9Q3L8U1 2897 aa13.33□□□□□ -0.28
TPM3P9-201ENST00000424846 IGKV1-8A0A0C4DH67 115 aa13.33□□□□□ -0.28
TPM3P9-201ENST00000424846 TMEM129A0AVI4 362 aa13.33□□□□□ -0.28
TPM3P9-201ENST00000424846 FAM170BA6NMN3 283 aa13.33□□□□□ -0.28
TPM3P9-201ENST00000424846 PRRT4C9JH25 899 aa13.33□□□□□ -0.28
TPM3P9-201ENST00000424846 GTPBP1O00178 669 aaKnown RBP13.33□□□□□ -0.28
TPM3P9-201ENST00000424846 LZTS3O60299 673 aaPredicted RBP13.33□□□□□ -0.28
TPM3P9-201ENST00000424846 UBXN7O94888 489 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms