RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 EIF2S3P41091 472 aaKnown RBP12.47□□□□□ -0.41
PRPF39-202ENST00000424478 GPR143P51810 404 aa12.47□□□□□ -0.41
PRPF39-202ENST00000424478 FUT5Q11128 374 aa12.47□□□□□ -0.41
PRPF39-202ENST00000424478 FUT7Q11130 342 aa12.47□□□□□ -0.41
PRPF39-202ENST00000424478 HACD2Q6Y1H2 254 aa12.47□□□□□ -0.41
PRPF39-202ENST00000424478 RNF111Q6ZNA4 994 aa12.47□□□□□ -0.41
PRPF39-202ENST00000424478 GPR155Q7Z3F1 870 aa12.47□□□□□ -0.41
PRPF39-202ENST00000424478 YTHDF3Q7Z739 585 aaKnown RBP12.47□□□□□ -0.41
PRPF39-202ENST00000424478 MRGPREQ86SM8 312 aa12.47□□□□□ -0.41
PRPF39-202ENST00000424478 ANKFN1Q8N957 763 aa12.47□□□□□ -0.41
PRPF39-202ENST00000424478 OR5M3Q8NGP4 307 aa12.47□□□□□ -0.41
PRPF39-202ENST00000424478 FAM110BQ8TC76 370 aa12.47□□□□□ -0.41
PRPF39-202ENST00000424478 ZNF675Q8TD23 568 aa12.47□□□□□ -0.41
PRPF39-202ENST00000424478 MS4A4EQ96PG1 132 aa12.47□□□□□ -0.41
PRPF39-202ENST00000424478 KCTD14Q9BQ13 255 aaPredicted RBP12.47□□□□□ -0.41
PRPF39-202ENST00000424478 C1orf21Q9H246 121 aa12.47□□□□□ -0.41
PRPF39-202ENST00000424478 FAF1Q9UNN5 650 aaPredicted RBP12.47□□□□□ -0.41
PRPF39-202ENST00000424478 MSRB2Q9Y3D2 182 aa12.47□□□□□ -0.41
PRPF39-202ENST00000424478 ATP5HO75947 161 aa12.47□□□□□ -0.41
PRPF39-202ENST00000424478 DDX5P17844 614 aaKnown RBP12.47□□□□□ -0.41
PRPF39-202ENST00000424478 RASSF2P50749 326 aa12.47□□□□□ -0.41
PRPF39-202ENST00000424478 SLC26A5P58743 744 aa12.47□□□□□ -0.41
PRPF39-202ENST00000424478 PSG6Q00889 435 aa12.47□□□□□ -0.41
PRPF39-202ENST00000424478 SIRT6Q8N6T7 355 aa12.47□□□□□ -0.41
PRPF39-202ENST00000424478 B3GNT7Q8NFL0 401 aa12.47□□□□□ -0.41
PRPF39-202ENST00000424478 OR52N2Q8NGI0 321 aa12.47□□□□□ -0.41
PRPF39-202ENST00000424478 FIG4Q92562 907 aa12.47□□□□□ -0.41
PRPF39-202ENST00000424478 DAZLQ92904 295 aaKnown RBP12.47□□□□□ -0.41
PRPF39-202ENST00000424478 ZG16BQ96DA0 208 aa12.47□□□□□ -0.41
PRPF39-202ENST00000424478 RMND5BQ96G75 393 aaPredicted RBP12.47□□□□□ -0.41
PRPF39-202ENST00000424478 NXF5Q9H1B4 397 aaKnown RBP12.47□□□□□ -0.41
PRPF39-202ENST00000424478 ABCD2Q9UBJ2 740 aa12.47□□□□□ -0.41
PRPF39-202ENST00000424478 NSG1A0A0A6YYJ2 146 aa12.46□□□□□ -0.41
PRPF39-202ENST00000424478 BLACEA4D250 179 aa12.46□□□□□ -0.41
PRPF39-202ENST00000424478 A6NL46 340 aa12.46□□□□□ -0.41
PRPF39-202ENST00000424478 C1QTNF9BB2RNN3 333 aa12.46□□□□□ -0.41
PRPF39-202ENST00000424478 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.46□□□□□ -0.41
PRPF39-202ENST00000424478 FCMRO60667 390 aa12.46□□□□□ -0.41
PRPF39-202ENST00000424478 DNAJB5O75953 348 aa12.46□□□□□ -0.41
PRPF39-202ENST00000424478 C1QTNF9P0C862 333 aa12.46□□□□□ -0.41
PRPF39-202ENST00000424478 PRIM2P49643 509 aa12.46□□□□□ -0.41
PRPF39-202ENST00000424478 GZMMP51124 257 aa12.46□□□□□ -0.41
PRPF39-202ENST00000424478 MAPK11Q15759 364 aa12.46□□□□□ -0.41
PRPF39-202ENST00000424478 DNAL1Q4LDG9 190 aa12.46□□□□□ -0.41
PRPF39-202ENST00000424478 B3GNTL1Q67FW5 361 aaPredicted RBP12.46□□□□□ -0.41
PRPF39-202ENST00000424478 MED25Q71SY5 747 aa12.46□□□□□ -0.41
PRPF39-202ENST00000424478 OR2T12Q8NG77 320 aa12.46□□□□□ -0.41
PRPF39-202ENST00000424478 OR8J3Q8NGG0 315 aa12.46□□□□□ -0.41
PRPF39-202ENST00000424478 OR1N1Q8NGS0 311 aa12.46□□□□□ -0.41
PRPF39-202ENST00000424478 KIAA1143Q96AT1 154 aaPredicted RBP12.46□□□□□ -0.41
PRPF39-202ENST00000424478 RUBCNLQ9H714 662 aa12.46□□□□□ -0.41
PRPF39-202ENST00000424478 ANKRD10Q9NXR5 420 aa12.46□□□□□ -0.41
PRPF39-202ENST00000424478 PTGFRNQ9P2B2 879 aa12.46□□□□□ -0.41
PRPF39-202ENST00000424478 CENPVL1A0A0U1RR11 272 aa12.46□□□□□ -0.41
PRPF39-202ENST00000424478 C17orf51A8MQB3 221 aa12.46□□□□□ -0.41
PRPF39-202ENST00000424478 C21orf140B9A014 251 aa12.46□□□□□ -0.41
PRPF39-202ENST00000424478 ADRB1P08588 477 aa12.46□□□□□ -0.41
PRPF39-202ENST00000424478 RAB40ALP0C0E4 278 aa12.46□□□□□ -0.41
PRPF39-202ENST00000424478 GPX2P18283 190 aa12.46□□□□□ -0.41
PRPF39-202ENST00000424478 NR0B1P51843 470 aaKnown RBP12.46□□□□□ -0.41
PRPF39-202ENST00000424478 OR56A1Q8NGH5 318 aa12.46□□□□□ -0.41
PRPF39-202ENST00000424478 ADAMTS15Q8TE58 950 aa12.46□□□□□ -0.41
PRPF39-202ENST00000424478 EFHD2Q96C19 240 aaPredicted RBP12.46□□□□□ -0.41
PRPF39-202ENST00000424478 CD300AQ9UGN4 299 aa12.46□□□□□ -0.41
PRPF39-202ENST00000424478 MKLN1Q9UL63 735 aa12.46□□□□□ -0.41
PRPF39-202ENST00000424478 ITPR1Q14643 2758 aa12.46□□□□□ -0.41
PRPF39-202ENST00000424478 TNFRSF21O75509 655 aa12.46□□□□□ -0.42
PRPF39-202ENST00000424478 ZIC2O95409 532 aaPredicted RBP12.46□□□□□ -0.42
PRPF39-202ENST00000424478 CT45A8P0DMV1 189 aa12.46□□□□□ -0.42
PRPF39-202ENST00000424478 CT45A9P0DMV2 189 aa12.46□□□□□ -0.42
PRPF39-202ENST00000424478 ITGAMP11215 1152 aa12.46□□□□□ -0.42
PRPF39-202ENST00000424478 MAN2A2P49641 1150 aa12.46□□□□□ -0.42
PRPF39-202ENST00000424478 DSTNP60981 165 aa12.46□□□□□ -0.42
PRPF39-202ENST00000424478 CT45A2Q5DJT8 189 aa12.46□□□□□ -0.42
PRPF39-202ENST00000424478 ZZZ3Q8IYH5 903 aa12.46□□□□□ -0.42
PRPF39-202ENST00000424478 FBXW8Q8N3Y1 598 aa12.46□□□□□ -0.42
PRPF39-202ENST00000424478 NATD1Q8N6N6 113 aa12.46□□□□□ -0.42
PRPF39-202ENST00000424478 OR14A16Q8NHC5 309 aa12.46□□□□□ -0.42
PRPF39-202ENST00000424478 SLC38A5Q8WUX1 472 aa12.46□□□□□ -0.42
PRPF39-202ENST00000424478 FGF11Q92914 225 aa12.46□□□□□ -0.42
PRPF39-202ENST00000424478 VSTM2LQ96N03 204 aa12.46□□□□□ -0.42
PRPF39-202ENST00000424478 COPS7AQ9UBW8 275 aa12.46□□□□□ -0.42
PRPF39-202ENST00000424478 PSMG1O95456 288 aa12.45□□□□□ -0.42
PRPF39-202ENST00000424478 IGKV1D-16P01601 117 aa12.45□□□□□ -0.42
PRPF39-202ENST00000424478 NQO1P15559 274 aaKnown RBP12.45□□□□□ -0.42
PRPF39-202ENST00000424478 SSPNQ14714 243 aa12.45□□□□□ -0.42
PRPF39-202ENST00000424478 EBPQ15125 230 aaKnown RBP12.45□□□□□ -0.42
PRPF39-202ENST00000424478 GPAT3Q53EU6 434 aa12.45□□□□□ -0.42
PRPF39-202ENST00000424478 ZSCAN1Q8NBB4 408 aa12.45□□□□□ -0.42
PRPF39-202ENST00000424478 KCNE4Q8WWG9 221 aa12.45□□□□□ -0.42
PRPF39-202ENST00000424478 ZNF578Q96N58 590 aaPredicted RBP12.45□□□□□ -0.42
PRPF39-202ENST00000424478 RSPO3Q9BXY4 272 aaPredicted RBP12.45□□□□□ -0.42
PRPF39-202ENST00000424478 GPR87Q9BY21 358 aa12.45□□□□□ -0.42
PRPF39-202ENST00000424478 ACTRT3Q9BYD9 372 aa12.45□□□□□ -0.42
PRPF39-202ENST00000424478 FLRT3Q9NZU0 649 aa12.45□□□□□ -0.42
PRPF39-202ENST00000424478 KCND3Q9UK17 655 aa12.45□□□□□ -0.42
PRPF39-202ENST00000424478 EML6Q6ZMW3 1958 aa12.45□□□□□ -0.42
PRPF39-202ENST00000424478 ARGFXA6NJG6 315 aa12.45□□□□□ -0.42
PRPF39-202ENST00000424478 SLC28A2O43868 658 aa12.45□□□□□ -0.42
PRPF39-202ENST00000424478 PRAMEF2O60811 474 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms