RNA–Protein interactions for RNA: ENST00000423945.5

SBDSP1-202, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 3 BASIC

Gene SBDSP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-202ENST00000423945 PAOXQ6QHF9 649 aa16.34■□□□□ 0.21
SBDSP1-202ENST00000423945 IKBIPQ70UQ0 350 aa16.34■□□□□ 0.21
SBDSP1-202ENST00000423945 LURAP1LQ8IV03 231 aa16.34■□□□□ 0.21
SBDSP1-202ENST00000423945 CLYBLQ8N0X4 340 aa16.34■□□□□ 0.21
SBDSP1-202ENST00000423945 BBS4Q96RK4 519 aa16.34■□□□□ 0.21
SBDSP1-202ENST00000423945 UBQLN3Q9H347 655 aa16.34■□□□□ 0.21
SBDSP1-202ENST00000423945 GLIPR2Q9H4G4 154 aa16.34■□□□□ 0.21
SBDSP1-202ENST00000423945 FOLH1BQ9HBA9 442 aa16.34■□□□□ 0.21
SBDSP1-202ENST00000423945 GIMAP4Q9NUV9 329 aa16.34■□□□□ 0.21
SBDSP1-202ENST00000423945 ZDHHC2Q9UIJ5 367 aa16.34■□□□□ 0.21
SBDSP1-202ENST00000423945 KLF2Q9Y5W3 355 aaPredicted RBP16.34■□□□□ 0.21
SBDSP1-202ENST00000423945 AQP7O14520 342 aa16.33■□□□□ 0.2
SBDSP1-202ENST00000423945 ACOX3O15254 700 aa16.33■□□□□ 0.2
SBDSP1-202ENST00000423945 SUSD5O60279 629 aa16.33■□□□□ 0.2
SBDSP1-202ENST00000423945 UGT2B11O75310 529 aa16.33■□□□□ 0.2
SBDSP1-202ENST00000423945 BCAS2O75934 225 aaPredicted RBP16.33■□□□□ 0.2
SBDSP1-202ENST00000423945 NEFHP12036 1026 aa16.33■□□□□ 0.2
SBDSP1-202ENST00000423945 AGAP20933 346 aa16.33■□□□□ 0.2
SBDSP1-202ENST00000423945 MC3RP41968 323 aa16.33■□□□□ 0.2
SBDSP1-202ENST00000423945 NCBP2P52298 156 aaKnown RBP eCLIP16.33■□□□□ 0.2
SBDSP1-202ENST00000423945 DCAF7P61962 342 aa16.33■□□□□ 0.2
SBDSP1-202ENST00000423945 RPL38P63173 70 aaKnown RBP16.33■□□□□ 0.2
SBDSP1-202ENST00000423945 PLCXD2Q0VAA5 305 aa16.33■□□□□ 0.2
SBDSP1-202ENST00000423945 MPP2Q14168 576 aa16.33■□□□□ 0.2
SBDSP1-202ENST00000423945 GXYLT1Q4G148 440 aa16.33■□□□□ 0.2
SBDSP1-202ENST00000423945 XKR7Q5GH72 579 aa16.33■□□□□ 0.2
SBDSP1-202ENST00000423945 TBCELQ5QJ74 424 aa16.33■□□□□ 0.2
SBDSP1-202ENST00000423945 SH2D4BQ5SQS7 431 aa16.33■□□□□ 0.2
SBDSP1-202ENST00000423945 SP5Q6BEB4 398 aaPredicted RBP16.33■□□□□ 0.2
SBDSP1-202ENST00000423945 ANKRD26P1Q6NSI1 321 aa16.33■□□□□ 0.2
SBDSP1-202ENST00000423945 TMEM81Q6P7N7 255 aa16.33■□□□□ 0.2
SBDSP1-202ENST00000423945 XKRXQ6PP77 449 aa16.33■□□□□ 0.2
SBDSP1-202ENST00000423945 SLC34A3Q8N130 599 aa16.33■□□□□ 0.2
SBDSP1-202ENST00000423945 OR5M9Q8NGP3 310 aa16.33■□□□□ 0.2
SBDSP1-202ENST00000423945 AGR3Q8TD06 166 aa16.33■□□□□ 0.2
SBDSP1-202ENST00000423945 GFM2Q969S9 779 aaKnown RBP16.33■□□□□ 0.2
SBDSP1-202ENST00000423945 PKNOX2Q96KN3 472 aa16.33■□□□□ 0.2
SBDSP1-202ENST00000423945 ZNF597Q96LX8 424 aa16.33■□□□□ 0.2
SBDSP1-202ENST00000423945 C3orf30Q96M34 536 aa16.33■□□□□ 0.2
SBDSP1-202ENST00000423945 JSRP1Q96MG2 331 aaPredicted RBP16.33■□□□□ 0.2
SBDSP1-202ENST00000423945 AMDHD1Q96NU7 426 aa16.33■□□□□ 0.2
SBDSP1-202ENST00000423945 CCT7Q99832 543 aa16.33■□□□□ 0.2
SBDSP1-202ENST00000423945 SLC6A15Q9H2J7 730 aa16.33■□□□□ 0.2
SBDSP1-202ENST00000423945 TP63Q9H3D4 680 aaPredicted RBP16.33■□□□□ 0.2
SBDSP1-202ENST00000423945 MIEF1Q9NQG6 463 aa16.33■□□□□ 0.2
SBDSP1-202ENST00000423945 QPCTLQ9NXS2 382 aa16.33■□□□□ 0.2
SBDSP1-202ENST00000423945 SENP1Q9P0U3 644 aa16.33■□□□□ 0.2
SBDSP1-202ENST00000423945 BAIAP2L1Q9UHR4 511 aa16.33■□□□□ 0.2
SBDSP1-202ENST00000423945 OR14I1A6ND48 311 aa16.32■□□□□ 0.2
SBDSP1-202ENST00000423945 RGS16O15492 202 aaPredicted RBP16.32■□□□□ 0.2
SBDSP1-202ENST00000423945 TSPAN2O60636 221 aa16.32■□□□□ 0.2
SBDSP1-202ENST00000423945 HCN1O60741 890 aa16.32■□□□□ 0.2
SBDSP1-202ENST00000423945 ERN1O75460 977 aaKnown RBP16.32■□□□□ 0.2
SBDSP1-202ENST00000423945 PSMG1O95456 288 aa16.32■□□□□ 0.2
SBDSP1-202ENST00000423945 SERPINB4P48594 390 aa16.32■□□□□ 0.2
SBDSP1-202ENST00000423945 MAN2A2P49641 1150 aa16.32■□□□□ 0.2
SBDSP1-202ENST00000423945 SMSP52788 366 aa16.32■□□□□ 0.2
SBDSP1-202ENST00000423945 TMEM198Q66K66 360 aa16.32■□□□□ 0.2
SBDSP1-202ENST00000423945 RTL6Q6ICC9 239 aa16.32■□□□□ 0.2
SBDSP1-202ENST00000423945 TMEM107Q6UX40 140 aa16.32■□□□□ 0.2
SBDSP1-202ENST00000423945 NUP54Q7Z3B4 507 aa16.32■□□□□ 0.2
SBDSP1-202ENST00000423945 ADGRG4Q8IZF6 3080 aa16.32■□□□□ 0.2
SBDSP1-202ENST00000423945 CLHC1Q8NHS4 586 aa16.32■□□□□ 0.2
SBDSP1-202ENST00000423945 TMBIM1Q969X1 311 aa16.32■□□□□ 0.2
SBDSP1-202ENST00000423945 TSSK3Q96PN8 268 aa16.32■□□□□ 0.2
SBDSP1-202ENST00000423945 ZNF395Q9H8N7 513 aaPredicted RBP16.32■□□□□ 0.2
SBDSP1-202ENST00000423945 EML4Q9HC35 981 aaKnown RBP16.32■□□□□ 0.2
SBDSP1-202ENST00000423945 ACKR4Q9NPB9 350 aa16.32■□□□□ 0.2
SBDSP1-202ENST00000423945 MED12Q93074 2177 aa16.31■□□□□ 0.2
SBDSP1-202ENST00000423945 ARHGAP21Q5T5U3 1957 aa16.31■□□□□ 0.2
SBDSP1-202ENST00000423945 A0A087WV62 115 aa16.31■□□□□ 0.2
SBDSP1-202ENST00000423945 TRGV5A0A0B4J1U4 118 aa16.31■□□□□ 0.2
SBDSP1-202ENST00000423945 C2orf72A6NCS6 295 aa16.31■□□□□ 0.2
SBDSP1-202ENST00000423945 C19orf84I3L1E1 186 aa16.31■□□□□ 0.2
SBDSP1-202ENST00000423945 UPK1AO00322 258 aa16.31■□□□□ 0.2
SBDSP1-202ENST00000423945 PLOD2O00469 737 aa16.31■□□□□ 0.2
SBDSP1-202ENST00000423945 CTIFO43310 598 aaKnown RBP16.31■□□□□ 0.2
SBDSP1-202ENST00000423945 AKAP10O43572 662 aa16.31■□□□□ 0.2
SBDSP1-202ENST00000423945 ITM2AO43736 263 aa16.31■□□□□ 0.2
SBDSP1-202ENST00000423945 TBX19O60806 448 aa16.31■□□□□ 0.2
SBDSP1-202ENST00000423945 LYPLA1O75608 230 aaPredicted RBP16.31■□□□□ 0.2
SBDSP1-202ENST00000423945 SNX4O95219 450 aa16.31■□□□□ 0.2
SBDSP1-202ENST00000423945 CHEK2O96017 543 aa16.31■□□□□ 0.2
SBDSP1-202ENST00000423945 DHRS4L1P0CG22 281 aa16.31■□□□□ 0.2
SBDSP1-202ENST00000423945 HTR1EP28566 365 aa16.31■□□□□ 0.2
SBDSP1-202ENST00000423945 SERPINB5P36952 375 aa16.31■□□□□ 0.2
SBDSP1-202ENST00000423945 TRPC1P48995 793 aa16.31■□□□□ 0.2
SBDSP1-202ENST00000423945 PSG6Q00889 435 aa16.31■□□□□ 0.2
SBDSP1-202ENST00000423945 PDE7AQ13946 482 aa16.31■□□□□ 0.2
SBDSP1-202ENST00000423945 ZNF630Q2M218 657 aaPredicted RBP16.31■□□□□ 0.2
SBDSP1-202ENST00000423945 GALNTL6Q49A17 601 aa16.31■□□□□ 0.2
SBDSP1-202ENST00000423945 CEP85LQ5SZL2 805 aa16.31■□□□□ 0.2
SBDSP1-202ENST00000423945 ZNF551Q7Z340 670 aaPredicted RBP16.31■□□□□ 0.2
SBDSP1-202ENST00000423945 DDIASQ8IXT1 998 aa16.31■□□□□ 0.2
SBDSP1-202ENST00000423945 OR4N2Q8NGD1 307 aa16.31■□□□□ 0.2
SBDSP1-202ENST00000423945 RNF138Q8WVD3 245 aa16.31■□□□□ 0.2
SBDSP1-202ENST00000423945 CIDECQ96AQ7 238 aaPredicted RBP16.31■□□□□ 0.2
SBDSP1-202ENST00000423945 SLC35A4Q96G79 324 aa16.31■□□□□ 0.2
SBDSP1-202ENST00000423945 ZNF764Q96H86 408 aaPredicted RBP16.31■□□□□ 0.2
SBDSP1-202ENST00000423945 TMEM41AQ96HV5 264 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms