RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 DCTN4Q9UJW0 460 aa14.53□□□□□ -0.08
BRAT1-202ENST00000421712 VPS4AQ9UN37 437 aa14.53□□□□□ -0.08
BRAT1-202ENST00000421712 GPR55Q9Y2T6 319 aaPredicted RBP14.53□□□□□ -0.08
BRAT1-202ENST00000421712 GPR45Q9Y5Y3 372 aa14.53□□□□□ -0.08
BRAT1-202ENST00000421712 NUP214P35658 2090 aaPredicted RBP14.53□□□□□ -0.08
BRAT1-202ENST00000421712 C9JVG2 144 aa14.52□□□□□ -0.09
BRAT1-202ENST00000421712 ANKRD28O15084 1053 aa14.52□□□□□ -0.09
BRAT1-202ENST00000421712 ACOX3O15254 700 aa14.52□□□□□ -0.09
BRAT1-202ENST00000421712 REM1O75628 298 aa14.52□□□□□ -0.09
BRAT1-202ENST00000421712 SLC22A3O75751 556 aa14.52□□□□□ -0.09
BRAT1-202ENST00000421712 CPSF4O95639 269 aaKnown RBP14.52□□□□□ -0.09
BRAT1-202ENST00000421712 PLA2G2AP14555 144 aa14.52□□□□□ -0.09
BRAT1-202ENST00000421712 CNR1P21554 472 aa14.52□□□□□ -0.09
BRAT1-202ENST00000421712 SOAT1P35610 550 aa14.52□□□□□ -0.09
BRAT1-202ENST00000421712 MEOX1P50221 254 aa14.52□□□□□ -0.09
BRAT1-202ENST00000421712 CORO7P57737 925 aa14.52□□□□□ -0.09
BRAT1-202ENST00000421712 FBXW4P57775 412 aa14.52□□□□□ -0.09
BRAT1-202ENST00000421712 RPP38P78345 283 aaKnown RBP14.52□□□□□ -0.09
BRAT1-202ENST00000421712 DPY19L1Q2PZI1 675 aa14.52□□□□□ -0.09
BRAT1-202ENST00000421712 FAM174BQ3ZCQ3 159 aa14.52□□□□□ -0.09
BRAT1-202ENST00000421712 PDCD4Q53EL6 469 aaKnown RBP14.52□□□□□ -0.09
BRAT1-202ENST00000421712 SPANXN4Q5MJ08 99 aa14.52□□□□□ -0.09
BRAT1-202ENST00000421712 LYPD8Q6UX82 237 aa14.52□□□□□ -0.09
BRAT1-202ENST00000421712 WDR53Q7Z5U6 358 aaPredicted RBP14.52□□□□□ -0.09
BRAT1-202ENST00000421712 CAMKMTQ7Z624 323 aa14.52□□□□□ -0.09
BRAT1-202ENST00000421712 ANKRD46Q86W74 232 aa14.52□□□□□ -0.09
BRAT1-202ENST00000421712 ATCAYQ86WG3 371 aa14.52□□□□□ -0.09
BRAT1-202ENST00000421712 MIER2Q8N344 545 aa14.52□□□□□ -0.09
BRAT1-202ENST00000421712 OR10G3Q8NGC4 313 aa14.52□□□□□ -0.09
BRAT1-202ENST00000421712 OR8J2Q8NGG1 315 aa14.52□□□□□ -0.09
BRAT1-202ENST00000421712 OR4A15Q8NGL6 344 aa14.52□□□□□ -0.09
BRAT1-202ENST00000421712 DNAJB8Q8NHS0 232 aa14.52□□□□□ -0.09
BRAT1-202ENST00000421712 FAR1Q8WVX9 515 aa14.52□□□□□ -0.09
BRAT1-202ENST00000421712 TESCQ96BS2 214 aa14.52□□□□□ -0.09
BRAT1-202ENST00000421712 OMA1Q96E52 524 aa14.52□□□□□ -0.09
BRAT1-202ENST00000421712 CHMP6Q96FZ7 201 aa14.52□□□□□ -0.09
BRAT1-202ENST00000421712 TEX37Q96LM6 180 aa14.52□□□□□ -0.09
BRAT1-202ENST00000421712 VSTM2LQ96N03 204 aa14.52□□□□□ -0.09
BRAT1-202ENST00000421712 BTBD9Q96Q07 612 aa14.52□□□□□ -0.09
BRAT1-202ENST00000421712 TAAR6Q96RI8 345 aa14.52□□□□□ -0.09
BRAT1-202ENST00000421712 CCDC28BQ9BUN5 200 aa14.52□□□□□ -0.09
BRAT1-202ENST00000421712 CLMPQ9H6B4 373 aa14.52□□□□□ -0.09
BRAT1-202ENST00000421712 ZCCHC3Q9NUD5 404 aaKnown RBP14.52□□□□□ -0.09
BRAT1-202ENST00000421712 OLAHQ9NV23 265 aa14.52□□□□□ -0.09
BRAT1-202ENST00000421712 NTNG1Q9Y2I2 539 aa14.52□□□□□ -0.09
BRAT1-202ENST00000421712 A0A0G2JND7 137 aa14.51□□□□□ -0.09
BRAT1-202ENST00000421712 J3QKU1 62 aa14.51□□□□□ -0.09
BRAT1-202ENST00000421712 RNASET2O00584 256 aaKnown RBP14.51□□□□□ -0.09
BRAT1-202ENST00000421712 IFI6P09912 130 aa14.51□□□□□ -0.09
BRAT1-202ENST00000421712 CT45A8P0DMV1 189 aa14.51□□□□□ -0.09
BRAT1-202ENST00000421712 CT45A9P0DMV2 189 aa14.51□□□□□ -0.09
BRAT1-202ENST00000421712 CCL3P10147 92 aa14.51□□□□□ -0.09
BRAT1-202ENST00000421712 TROVE2P10155 538 aaKnown RBP eCLIP14.51□□□□□ -0.09
BRAT1-202ENST00000421712 IL12BP29460 328 aa14.51□□□□□ -0.09
BRAT1-202ENST00000421712 GABRA3P34903 492 aa14.51□□□□□ -0.09
BRAT1-202ENST00000421712 MDH1P40925 334 aaKnown RBP14.51□□□□□ -0.09
BRAT1-202ENST00000421712 CCT3P49368 545 aaKnown RBP14.51□□□□□ -0.09
BRAT1-202ENST00000421712 DGKQP52824 942 aa14.51□□□□□ -0.09
BRAT1-202ENST00000421712 ALDH6A1Q02252 535 aaKnown RBP14.51□□□□□ -0.09
BRAT1-202ENST00000421712 PLGLB1Q02325 96 aa14.51□□□□□ -0.09
BRAT1-202ENST00000421712 SF3A3Q12874 501 aaKnown RBP eCLIP14.51□□□□□ -0.091e-14■■■□□ 17.4
BRAT1-202ENST00000421712 NTRK2Q16620 822 aa14.51□□□□□ -0.09
BRAT1-202ENST00000421712 CT45A2Q5DJT8 189 aa14.51□□□□□ -0.09
BRAT1-202ENST00000421712 PRAMEF20Q5VT98 475 aa14.51□□□□□ -0.09
BRAT1-202ENST00000421712 CLECL1Q8IZS7 167 aa14.51□□□□□ -0.09
BRAT1-202ENST00000421712 SLC34A3Q8N130 599 aa14.51□□□□□ -0.09
BRAT1-202ENST00000421712 CPSF7Q8N684 471 aaKnown RBP14.51□□□□□ -0.09
BRAT1-202ENST00000421712 GLB1L3Q8NCI6 653 aaPredicted RBP14.51□□□□□ -0.09
BRAT1-202ENST00000421712 RFWD2Q8NHY2 731 aa14.51□□□□□ -0.09
BRAT1-202ENST00000421712 SLC9A6Q92581 669 aa14.51□□□□□ -0.09
BRAT1-202ENST00000421712 JADE3Q92613 823 aa14.51□□□□□ -0.09
BRAT1-202ENST00000421712 DIO2Q92813 273 aa14.51□□□□□ -0.09
BRAT1-202ENST00000421712 TMBIM1Q969X1 311 aa14.51□□□□□ -0.09
BRAT1-202ENST00000421712 FAM120BQ96EK7 910 aaKnown RBP14.51□□□□□ -0.09
BRAT1-202ENST00000421712 MS4A4EQ96PG1 132 aa14.51□□□□□ -0.09
BRAT1-202ENST00000421712 YIPF4Q9BSR8 244 aa14.51□□□□□ -0.09
BRAT1-202ENST00000421712 NEUROD4Q9HD90 331 aa14.51□□□□□ -0.09
BRAT1-202ENST00000421712 Q9N2J8 555 aa14.51□□□□□ -0.09
BRAT1-202ENST00000421712 FGFR1OP2Q9NVK5 253 aa14.51□□□□□ -0.09
BRAT1-202ENST00000421712 PRSS51A0A1B0GVH4 220 aa14.5□□□□□ -0.09
BRAT1-202ENST00000421712 TO15178 435 aa14.5□□□□□ -0.09
BRAT1-202ENST00000421712 PPM1BO75688 479 aa14.5□□□□□ -0.09
BRAT1-202ENST00000421712 NAGAP17050 411 aa14.5□□□□□ -0.09
BRAT1-202ENST00000421712 NCF2P19878 526 aaPredicted RBP14.5□□□□□ -0.09
BRAT1-202ENST00000421712 IL12AP29459 219 aa14.5□□□□□ -0.09
BRAT1-202ENST00000421712 PIGAP37287 484 aa14.5□□□□□ -0.09
BRAT1-202ENST00000421712 RFC3P40938 356 aa14.5□□□□□ -0.09
BRAT1-202ENST00000421712 RFX3P48380 749 aa14.5□□□□□ -0.09
BRAT1-202ENST00000421712 PRIM2P49643 509 aa14.5□□□□□ -0.09
BRAT1-202ENST00000421712 WNT3P56703 355 aa14.5□□□□□ -0.09
BRAT1-202ENST00000421712 KCNJ2P63252 427 aa14.5□□□□□ -0.09
BRAT1-202ENST00000421712 HBA1P69905 142 aa14.5□□□□□ -0.09
BRAT1-202ENST00000421712 TP53BP2Q13625 1128 aa14.5□□□□□ -0.09
BRAT1-202ENST00000421712 ELOAQ14241 798 aaKnown RBP14.5□□□□□ -0.09
BRAT1-202ENST00000421712 VPS26BQ4G0F5 336 aa14.5□□□□□ -0.09
BRAT1-202ENST00000421712 PAOXQ6QHF9 649 aa14.5□□□□□ -0.09
BRAT1-202ENST00000421712 NPSR1Q6W5P4 371 aa14.5□□□□□ -0.09
BRAT1-202ENST00000421712 CDRT4Q8N9R6 151 aa14.5□□□□□ -0.09
BRAT1-202ENST00000421712 OR4N2Q8NGD1 307 aa14.5□□□□□ -0.09
BRAT1-202ENST00000421712 OR56A1Q8NGH5 318 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms