RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 RAE1P78406 368 aaKnown RBP7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 VGLL4Q14135 290 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 UPP1Q16831 310 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 FAM74A3Q4VXF1 159 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 PDSS1Q5T2R2 415 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 ARMC12Q5T9G4 340 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 KIAA1211LQ6NV74 962 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 IL20RBQ6UXL0 311 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 FAM151BQ6UXP7 276 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 MACC1Q6ZN28 852 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 SPATA2LQ8IUW3 424 aaPredicted RBP7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 MCATQ8IVS2 390 aaKnown RBP7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 SAMD12Q8N8I0 201 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 DNAJB3Q8WWF6 145 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 TEFMQ96QE5 360 aaKnown RBP7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 SORBS1Q9BX66 1292 aaKnown RBP7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 MAGEH1Q9H213 219 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 TMEM161AQ9NX61 479 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 GPR160Q9UJ42 338 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 SLC9A8Q9Y2E8 581 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 PCDHGA9Q9Y5G4 932 aaKnown RBP7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 A0A1B0GVC2 190 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 A6NIN4 97 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 GAPDHSO14556 408 aaPredicted RBP7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 TFP02787 698 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 SRPRAP08240 638 aaKnown RBP7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 MMP3P08254 477 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 HSD3B1P14060 373 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 THBS2P35442 1172 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 SLC1A3P43003 542 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 GIPRP48546 466 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 MTNR1BP49286 362 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 FGL1Q08830 312 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 ACSM1Q08AH1 577 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 CHIT1Q13231 466 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 GINS1Q14691 196 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 MINDY4Q4G0A6 757 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 EOGTQ5NDL2 527 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 VASNQ6EMK4 673 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 ACSM5Q6NUN0 579 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 TCTN3Q6NUS6 607 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 ALKAL2Q6UX46 152 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 GPR26Q8NDV2 337 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 CNOT9Q92600 299 aaKnown RBP7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 MRPS24Q96EL2 167 aaKnown RBP7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 LCORQ96JN0 433 aaPredicted RBP7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 MTERF1Q99551 399 aaKnown RBP7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 WRAP53Q9BUR4 548 aaKnown RBP7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 ACTR10Q9NZ32 417 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 GULP1Q9UBP9 304 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 ACSL6Q9UKU0 697 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 SLC22A14Q9Y267 594 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 TRIP12Q14669 1992 aaPredicted RBP7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 MBLAC1A4D2B0 266 aaPredicted RBP7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 EFCAB14O75071 495 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 PRAMEF12O95522 483 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 H1F0P07305 194 aaKnown RBP7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 ANXA4P09525 319 aaPredicted RBP7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 HIST1H2AGP0C0S8 130 aaPredicted RBP7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 HIST1H2ADP20671 130 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 CCND3P30281 292 aaPredicted RBP7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 RPL9P32969 192 aaKnown RBP7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 ZNF155Q12901 538 aaPredicted RBP7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 ZNF385BQ569K4 471 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 HECTD3Q5T447 861 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 HIST2H2AA3Q6FI13 130 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 HTR3DQ70Z44 454 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 ZNF454Q8N9F8 522 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 OR4K1Q8NGD4 311 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 OR1S1Q8NH92 325 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 WDR20Q8TBZ3 569 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 SLC38A3Q99624 504 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 HIST1H2AJQ99878 128 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 C7orf50Q9BRJ6 194 aaKnown RBP7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 GPR63Q9BZJ6 419 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 BHLHE41Q9C0J9 482 aaPredicted RBP7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 D6RAR5 112 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 H0YC42 278 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 CHST10O43529 356 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 SGTAO43765 313 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 PEX14O75381 377 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 FGF18O76093 207 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 CBSLP0DN79 551 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 NFYAP23511 347 aaPredicted RBP7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 ATP5A1P25705 553 aaKnown RBP7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 CBSP35520 551 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 HNMTP50135 292 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 CDK5Q00535 292 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 NFATC2Q13469 925 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 ZSWIM7Q19AV6 140 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 SLC5A12Q1EHB4 618 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 SFRP5Q5T4F7 317 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 SLC36A4Q6YBV0 504 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 SHFQ7M4L6 423 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 LHFPL3Q86UP9 236 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 PAQR7Q86WK9 346 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 SCN4BQ8IWT1 228 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 CFAP52Q8N1V2 620 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 FUZQ9BT04 418 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 SPON2Q9BUD6 331 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms