RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 VTI1BQ9UEU0 232 aa16.54■□□□□ 0.24
VCP-202ENST00000417448 ZNF223Q9UK11 482 aaPredicted RBP16.54■□□□□ 0.24
VCP-202ENST00000417448 CBLCQ9ULV8 474 aa16.54■□□□□ 0.24
VCP-202ENST00000417448 EDARQ9UNE0 448 aa16.54■□□□□ 0.24
VCP-202ENST00000417448 RAP2CQ9Y3L5 183 aa16.54■□□□□ 0.24
VCP-202ENST00000417448 PINLYPA6NC86 204 aa16.53■□□□□ 0.24
VCP-202ENST00000417448 HMGB1P1B2RPK0 211 aaPredicted RBP16.53■□□□□ 0.24
VCP-202ENST00000417448 LSM1O15116 133 aaKnown RBP16.53■□□□□ 0.24
VCP-202ENST00000417448 RSL1D1O76021 490 aaKnown RBP16.53■□□□□ 0.24
VCP-202ENST00000417448 LRATO95237 230 aa16.53■□□□□ 0.24
VCP-202ENST00000417448 KITP10721 976 aa16.53■□□□□ 0.24
VCP-202ENST00000417448 ALOX15P16050 662 aaPredicted RBP16.53■□□□□ 0.24
VCP-202ENST00000417448 GRK2P25098 689 aa16.53■□□□□ 0.24
VCP-202ENST00000417448 PIK3R1P27986 724 aa16.53■□□□□ 0.24
VCP-202ENST00000417448 PCSK6P29122 969 aa16.53■□□□□ 0.24
VCP-202ENST00000417448 XKP51811 444 aa16.53■□□□□ 0.24
VCP-202ENST00000417448 IGLV3-21P80748 117 aaPredicted RBP16.53■□□□□ 0.24
VCP-202ENST00000417448 C2orf80Q0P641 193 aa16.53■□□□□ 0.24
VCP-202ENST00000417448 OR52E8Q6IFG1 317 aa16.53■□□□□ 0.24
VCP-202ENST00000417448 ARMC10Q8N2F6 343 aa16.53■□□□□ 0.24
VCP-202ENST00000417448 ZNF75CPQ92670 426 aaPredicted RBP16.53■□□□□ 0.24
VCP-202ENST00000417448 EXOSC8Q96B26 276 aaKnown RBP16.53■□□□□ 0.24
VCP-202ENST00000417448 DGAT2Q96PD7 388 aa16.53■□□□□ 0.24
VCP-202ENST00000417448 C1orf50Q9BV19 199 aa16.53■□□□□ 0.24
VCP-202ENST00000417448 DEPPQ9NTK1 212 aa16.53■□□□□ 0.24
VCP-202ENST00000417448 MARCOQ9UEW3 520 aaPredicted RBP16.53■□□□□ 0.24
VCP-202ENST00000417448 HIVEP2P31629 2446 aa16.53■□□□□ 0.24
VCP-202ENST00000417448 TRBV11-1A0A0K0K1C0 115 aa16.52■□□□□ 0.24
VCP-202ENST00000417448 AKAP10O43572 662 aa16.52■□□□□ 0.24
VCP-202ENST00000417448 CT62P0C5K7 136 aa16.52■□□□□ 0.24
VCP-202ENST00000417448 STT3AP46977 705 aa16.52■□□□□ 0.24
VCP-202ENST00000417448 RPL14P50914 215 aaKnown RBP16.52■□□□□ 0.24
VCP-202ENST00000417448 GPR143P51810 404 aa16.52■□□□□ 0.24
VCP-202ENST00000417448 ELAVL1Q15717 326 aaKnown RBP16.52■□□□□ 0.24
VCP-202ENST00000417448 XKR7Q5GH72 579 aa16.52■□□□□ 0.24
VCP-202ENST00000417448 ANKRD26P1Q6NSI1 321 aa16.52■□□□□ 0.24
VCP-202ENST00000417448 SLC48A1Q6P1K1 146 aa16.52■□□□□ 0.24
VCP-202ENST00000417448 ZNF585AQ6P3V2 769 aa16.52■□□□□ 0.24
VCP-202ENST00000417448 B3GNT6Q6ZMB0 384 aa16.52■□□□□ 0.24
VCP-202ENST00000417448 APCDD1LQ8NCL9 501 aa16.52■□□□□ 0.24
VCP-202ENST00000417448 B3GNT7Q8NFL0 401 aa16.52■□□□□ 0.24
VCP-202ENST00000417448 OR4K14Q8NGD5 310 aa16.52■□□□□ 0.24
VCP-202ENST00000417448 KLHL29Q96CT2 875 aa16.52■□□□□ 0.24
VCP-202ENST00000417448 ADAM21Q9UKJ8 722 aa16.52■□□□□ 0.24
VCP-202ENST00000417448 EXO1Q9UQ84 846 aaKnown RBP16.52■□□□□ 0.24
VCP-202ENST00000417448 LIPGQ9Y5X9 500 aa16.52■□□□□ 0.24
VCP-202ENST00000417448 CLCA3PQ9Y6N3 262 aa16.52■□□□□ 0.24
VCP-202ENST00000417448 OR10H2O60403 315 aa16.51■□□□□ 0.23
VCP-202ENST00000417448 SNNO75324 88 aaPredicted RBP16.51■□□□□ 0.23
VCP-202ENST00000417448 TRA2BP62995 288 aaKnown RBP16.51■□□□□ 0.23
VCP-202ENST00000417448 SERTAD2Q14140 314 aa16.51■□□□□ 0.23
VCP-202ENST00000417448 KEAP1Q14145 624 aa16.51■□□□□ 0.23
VCP-202ENST00000417448 ZNF267Q14586 743 aaPredicted RBP16.51■□□□□ 0.23
VCP-202ENST00000417448 SLC25A35Q3KQZ1 300 aa16.51■□□□□ 0.23
VCP-202ENST00000417448 FLYWCH1Q4VC44 716 aa16.51■□□□□ 0.23
VCP-202ENST00000417448 GALNT18Q6P9A2 607 aa16.51■□□□□ 0.23
VCP-202ENST00000417448 WDR53Q7Z5U6 358 aaPredicted RBP16.51■□□□□ 0.23
VCP-202ENST00000417448 CYP4Z2PQ8N1L4 340 aa16.51■□□□□ 0.23
VCP-202ENST00000417448 TMEM132CQ8N3T6 1108 aa16.51■□□□□ 0.23
VCP-202ENST00000417448 ADCY4Q8NFM4 1077 aa16.51■□□□□ 0.23
VCP-202ENST00000417448 SLC2A12Q8TD20 617 aa16.51■□□□□ 0.23
VCP-202ENST00000417448 TUBGCP3Q96CW5 907 aa16.51■□□□□ 0.23
VCP-202ENST00000417448 RBM18Q96H35 190 aaKnown RBP16.51■□□□□ 0.23
VCP-202ENST00000417448 TSSK3Q96PN8 268 aa16.51■□□□□ 0.23
VCP-202ENST00000417448 CNPPD1Q9BV87 410 aa16.51■□□□□ 0.23
VCP-202ENST00000417448 NUF2Q9BZD4 464 aa16.51■□□□□ 0.23
VCP-202ENST00000417448 ZDHHC11Q9H8X9 412 aa16.51■□□□□ 0.23
VCP-202ENST00000417448 SIRT5Q9NXA8 310 aa16.51■□□□□ 0.23
VCP-202ENST00000417448 CUBNO60494 3623 aa16.5■□□□□ 0.23
VCP-202ENST00000417448 C1orf226A1L170 272 aa16.5■□□□□ 0.23
VCP-202ENST00000417448 FIGNL2A6NMB9 653 aa16.5■□□□□ 0.23
VCP-202ENST00000417448 FAM166BA8MTA8 275 aa16.5■□□□□ 0.23
VCP-202ENST00000417448 GUCY1B2O75343 617 aa16.5■□□□□ 0.23
VCP-202ENST00000417448 CPMP14384 443 aa16.5■□□□□ 0.23
VCP-202ENST00000417448 SDC1P18827 310 aa16.5■□□□□ 0.23
VCP-202ENST00000417448 PRPH2P23942 346 aa16.5■□□□□ 0.23
VCP-202ENST00000417448 HK2P52789 917 aa16.5■□□□□ 0.23
VCP-202ENST00000417448 ERVK-8P63133 956 aa16.5■□□□□ 0.23
VCP-202ENST00000417448 ZNF763Q0D2J5 394 aa16.5■□□□□ 0.23
VCP-202ENST00000417448 LTB4RQ15722 352 aa16.5■□□□□ 0.23
VCP-202ENST00000417448 C6orf136Q5SQH8 315 aa16.5■□□□□ 0.23
VCP-202ENST00000417448 ATG16L1Q676U5 607 aa16.5■□□□□ 0.23
VCP-202ENST00000417448 FAM71E1Q6IPT2 247 aa16.5■□□□□ 0.23
VCP-202ENST00000417448 FAM111BQ6SJ93 734 aa16.5■□□□□ 0.23
VCP-202ENST00000417448 CIARTQ8N365 385 aaPredicted RBP16.5■□□□□ 0.23
VCP-202ENST00000417448 SIMC1Q8NDZ2 872 aa16.5■□□□□ 0.23
VCP-202ENST00000417448 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.5■□□□□ 0.23
VCP-202ENST00000417448 CNRIP1Q96F85 164 aaPredicted RBP16.5■□□□□ 0.23
VCP-202ENST00000417448 SENP5Q96HI0 755 aaPredicted RBP16.5■□□□□ 0.23
VCP-202ENST00000417448 FAIM2Q9BWQ8 316 aa16.5■□□□□ 0.23
VCP-202ENST00000417448 DEFB126Q9BYW3 111 aa16.5■□□□□ 0.23
VCP-202ENST00000417448 ANKRA2Q9H9E1 313 aa16.5■□□□□ 0.23
VCP-202ENST00000417448 PFDN4Q9NQP4 134 aa16.5■□□□□ 0.23
VCP-202ENST00000417448 THAP1Q9NVV9 213 aa16.5■□□□□ 0.23
VCP-202ENST00000417448 UTS2RQ9UKP6 389 aa16.5■□□□□ 0.23
VCP-202ENST00000417448 ERVK-19Q9WJR5 959 aa16.5■□□□□ 0.23
VCP-202ENST00000417448 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.5■□□□□ 0.23
VCP-202ENST00000417448 A0A0G2JMM0 328 aa16.49■□□□□ 0.23
VCP-202ENST00000417448 A0A1W2PPB8 328 aa16.49■□□□□ 0.23
VCP-202ENST00000417448 A0A1W2PRS3 328 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms