RNA–Protein interactions for RNA: ENST00000415281.1

NCKIPSD-203, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-203ENST00000415281 MYZAPP0CAP1 466 aa11.34□□□□□ -0.59
NCKIPSD-203ENST00000415281 GDF1P27539 372 aa11.34□□□□□ -0.59
NCKIPSD-203ENST00000415281 PIK3R1P27986 724 aa11.34□□□□□ -0.59
NCKIPSD-203ENST00000415281 HMOX2P30519 316 aa11.34□□□□□ -0.59
NCKIPSD-203ENST00000415281 ALDH3A1P30838 453 aa11.34□□□□□ -0.59
NCKIPSD-203ENST00000415281 TIMP3P35625 211 aa11.34□□□□□ -0.59
NCKIPSD-203ENST00000415281 EMDP50402 254 aa11.34□□□□□ -0.59
NCKIPSD-203ENST00000415281 ART1P52961 327 aa11.34□□□□□ -0.59
NCKIPSD-203ENST00000415281 DNAJB13P59910 316 aa11.34□□□□□ -0.59
NCKIPSD-203ENST00000415281 RAE1P78406 368 aaKnown RBP11.34□□□□□ -0.59
NCKIPSD-203ENST00000415281 EXOSC7Q15024 291 aaKnown RBP11.34□□□□□ -0.59
NCKIPSD-203ENST00000415281 LTB4RQ15722 352 aa11.34□□□□□ -0.59
NCKIPSD-203ENST00000415281 TRMT12Q53H54 448 aaKnown RBP11.34□□□□□ -0.59
NCKIPSD-203ENST00000415281 WIPI1Q5MNZ9 446 aaPredicted RBP11.34□□□□□ -0.59
NCKIPSD-203ENST00000415281 LIPMQ5VYY2 423 aa11.34□□□□□ -0.59
NCKIPSD-203ENST00000415281 CES4AQ5XG92 561 aa11.34□□□□□ -0.59
NCKIPSD-203ENST00000415281 TIGD3Q6B0B8 471 aa11.34□□□□□ -0.59
NCKIPSD-203ENST00000415281 TMEM81Q6P7N7 255 aa11.34□□□□□ -0.59
NCKIPSD-203ENST00000415281 PLXDC2Q6UX71 529 aa11.34□□□□□ -0.59
NCKIPSD-203ENST00000415281 COMMD6Q7Z4G1 85 aa11.34□□□□□ -0.59
NCKIPSD-203ENST00000415281 MED12LQ86YW9 2145 aa11.34□□□□□ -0.59
NCKIPSD-203ENST00000415281 GALNT12Q8IXK2 581 aa11.34□□□□□ -0.59
NCKIPSD-203ENST00000415281 CLYBLQ8N0X4 340 aa11.34□□□□□ -0.59
NCKIPSD-203ENST00000415281 WDSUB1Q8N9V3 476 aa11.34□□□□□ -0.59
NCKIPSD-203ENST00000415281 SELENOMQ8WWX9 145 aa11.34□□□□□ -0.59
NCKIPSD-203ENST00000415281 TMEM41AQ96HV5 264 aa11.34□□□□□ -0.59
NCKIPSD-203ENST00000415281 KCNA7Q96RP8 456 aa11.34□□□□□ -0.59
NCKIPSD-203ENST00000415281 ZNF382Q96SR6 550 aa11.34□□□□□ -0.59
NCKIPSD-203ENST00000415281 SECISBP2Q96T21 854 aaKnown RBP11.34□□□□□ -0.59
NCKIPSD-203ENST00000415281 HBEGFQ99075 208 aa11.34□□□□□ -0.59
NCKIPSD-203ENST00000415281 CENPKQ9BS16 269 aa11.34□□□□□ -0.59
NCKIPSD-203ENST00000415281 G6PC3Q9BUM1 346 aa11.34□□□□□ -0.59
NCKIPSD-203ENST00000415281 MECRQ9BV79 373 aa11.34□□□□□ -0.59
NCKIPSD-203ENST00000415281 ITPAQ9BY32 194 aa11.34□□□□□ -0.59
NCKIPSD-203ENST00000415281 EXO5Q9H790 373 aa11.34□□□□□ -0.59
NCKIPSD-203ENST00000415281 MID1IP1Q9NPA3 183 aa11.34□□□□□ -0.59
NCKIPSD-203ENST00000415281 KCNK9Q9NPC2 374 aa11.34□□□□□ -0.59
NCKIPSD-203ENST00000415281 MID2Q9UJV3 735 aa11.34□□□□□ -0.59
NCKIPSD-203ENST00000415281 SNX6Q9UNH7 406 aa11.34□□□□□ -0.59
NCKIPSD-203ENST00000415281 TIMM22Q9Y584 194 aa11.34□□□□□ -0.59
NCKIPSD-203ENST00000415281 ANKHD1Q8IWZ3 2542 aaKnown RBP11.34□□□□□ -0.59
NCKIPSD-203ENST00000415281 ACANP16112 2415 aa11.34□□□□□ -0.59
NCKIPSD-203ENST00000415281 C17orf51A8MQB3 221 aa11.33□□□□□ -0.6
NCKIPSD-203ENST00000415281 GNB5O14775 395 aa11.33□□□□□ -0.6
NCKIPSD-203ENST00000415281 DYRK3O43781 588 aa11.33□□□□□ -0.6
NCKIPSD-203ENST00000415281 TRIM13O60858 407 aa11.33□□□□□ -0.6
NCKIPSD-203ENST00000415281 ICOSLGO75144 302 aa11.33□□□□□ -0.6
NCKIPSD-203ENST00000415281 UGT2B11O75310 529 aa11.33□□□□□ -0.6
NCKIPSD-203ENST00000415281 SNX4O95219 450 aa11.33□□□□□ -0.6
NCKIPSD-203ENST00000415281 ATP1B1P05026 303 aa11.33□□□□□ -0.6
NCKIPSD-203ENST00000415281 PORP16435 677 aaPredicted RBP11.33□□□□□ -0.6
NCKIPSD-203ENST00000415281 NT5EP21589 574 aa11.33□□□□□ -0.6
NCKIPSD-203ENST00000415281 FEN1P39748 380 aaKnown RBP11.33□□□□□ -0.6
NCKIPSD-203ENST00000415281 AGFG1P52594 562 aaKnown RBP11.33□□□□□ -0.6
NCKIPSD-203ENST00000415281 FOXF2Q12947 444 aa11.33□□□□□ -0.6
NCKIPSD-203ENST00000415281 LCP2Q13094 533 aa11.33□□□□□ -0.6
NCKIPSD-203ENST00000415281 MYBPHQ13203 477 aa11.33□□□□□ -0.6
NCKIPSD-203ENST00000415281 NNATQ16517 81 aa11.33□□□□□ -0.6
NCKIPSD-203ENST00000415281 TNFAIP8L3Q5GJ75 292 aa11.33□□□□□ -0.6
NCKIPSD-203ENST00000415281 TBCELQ5QJ74 424 aa11.33□□□□□ -0.6
NCKIPSD-203ENST00000415281 CCNYL2Q5T2Q4 361 aa11.33□□□□□ -0.6
NCKIPSD-203ENST00000415281 NSUN5P2Q63ZY6 315 aa11.33□□□□□ -0.6
NCKIPSD-203ENST00000415281 TMEM198Q66K66 360 aa11.33□□□□□ -0.6
NCKIPSD-203ENST00000415281 SCIMPQ6UWF3 145 aa11.33□□□□□ -0.6
NCKIPSD-203ENST00000415281 WDR53Q7Z5U6 358 aaPredicted RBP11.33□□□□□ -0.6
NCKIPSD-203ENST00000415281 ADGRE4PQ86SQ3 457 aa11.33□□□□□ -0.6
NCKIPSD-203ENST00000415281 TMEM200AQ86VY9 491 aa11.33□□□□□ -0.6
NCKIPSD-203ENST00000415281 TAGAPQ8N103 731 aa11.33□□□□□ -0.6
NCKIPSD-203ENST00000415281 C17orf47Q8NEP4 570 aa11.33□□□□□ -0.6
NCKIPSD-203ENST00000415281 ADCY4Q8NFM4 1077 aa11.33□□□□□ -0.6
NCKIPSD-203ENST00000415281 MYRIPQ8NFW9 859 aa11.33□□□□□ -0.6
NCKIPSD-203ENST00000415281 OR7G1Q8NGA0 311 aa11.33□□□□□ -0.6
NCKIPSD-203ENST00000415281 RNF138Q8WVD3 245 aa11.33□□□□□ -0.6
NCKIPSD-203ENST00000415281 C11orf24Q96F05 449 aaPredicted RBP11.33□□□□□ -0.6
NCKIPSD-203ENST00000415281 PGM2Q96G03 612 aa11.33□□□□□ -0.6
NCKIPSD-203ENST00000415281 ZNF597Q96LX8 424 aa11.33□□□□□ -0.6
NCKIPSD-203ENST00000415281 GPATCH1Q9BRR8 931 aaKnown RBP11.33□□□□□ -0.6
NCKIPSD-203ENST00000415281 GATA5Q9BWX5 397 aaPredicted RBP11.33□□□□□ -0.6
NCKIPSD-203ENST00000415281 RASSF1Q9NS23 344 aa11.33□□□□□ -0.6
NCKIPSD-203ENST00000415281 CCM2LQ9NUG4 571 aaPredicted RBP11.33□□□□□ -0.6
NCKIPSD-203ENST00000415281 RYDENQ9NUL5 291 aaKnown RBP11.33□□□□□ -0.6
NCKIPSD-203ENST00000415281 DNAJB12Q9NXW2 375 aaKnown RBP11.33□□□□□ -0.6
NCKIPSD-203ENST00000415281 TRPS1Q9UHF7 1281 aa11.33□□□□□ -0.6
NCKIPSD-203ENST00000415281 CBLCQ9ULV8 474 aa11.33□□□□□ -0.6
NCKIPSD-203ENST00000415281 SLC12A4Q9UP95 1085 aa11.33□□□□□ -0.6
NCKIPSD-203ENST00000415281 C15orf38-AP3S2A0A0A6YYH1 394 aa11.32□□□□□ -0.6
NCKIPSD-203ENST00000415281 A0A1W2PPR1 153 aa11.32□□□□□ -0.6
NCKIPSD-203ENST00000415281 C1orf226A1L170 272 aa11.32□□□□□ -0.6
NCKIPSD-203ENST00000415281 WDR91A4D1P6 747 aa11.32□□□□□ -0.6
NCKIPSD-203ENST00000415281 MBD3L4A6NDZ8 208 aaPredicted RBP11.32□□□□□ -0.6
NCKIPSD-203ENST00000415281 MBD3L3A6NE82 208 aaPredicted RBP11.32□□□□□ -0.6
NCKIPSD-203ENST00000415281 GOLGA6L10A6NI86 522 aa11.32□□□□□ -0.6
NCKIPSD-203ENST00000415281 MBD3L5A6NJ08 208 aaPredicted RBP11.32□□□□□ -0.6
NCKIPSD-203ENST00000415281 HSPB2A8KAH6 182 aa11.32□□□□□ -0.6
NCKIPSD-203ENST00000415281 MANBAO00462 879 aa11.32□□□□□ -0.6
NCKIPSD-203ENST00000415281 ULK1O75385 1050 aa11.32□□□□□ -0.6
NCKIPSD-203ENST00000415281 CRCPO75575 148 aa11.32□□□□□ -0.6
NCKIPSD-203ENST00000415281 PPM1BO75688 479 aa11.32□□□□□ -0.6
NCKIPSD-203ENST00000415281 TRAPPC6AO75865 159 aa11.32□□□□□ -0.6
NCKIPSD-203ENST00000415281 ESRRBO95718 433 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms