RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 PGDP52209 483 aa12.32□□□□□ -0.44
CNN3-203ENST00000415017 SLC7A2P52569 658 aa12.32□□□□□ -0.44
CNN3-203ENST00000415017 EEFSECP57772 596 aaKnown RBP12.32□□□□□ -0.44
CNN3-203ENST00000415017 MTPNP58546 118 aa12.32□□□□□ -0.44
CNN3-203ENST00000415017 RNF4P78317 190 aa12.32□□□□□ -0.44
CNN3-203ENST00000415017 TP53BP2Q13625 1128 aa12.32□□□□□ -0.44
CNN3-203ENST00000415017 ATP1A4Q13733 1029 aa12.32□□□□□ -0.44
CNN3-203ENST00000415017 DNAL1Q4LDG9 190 aa12.32□□□□□ -0.44
CNN3-203ENST00000415017 CT45A2Q5DJT8 189 aa12.32□□□□□ -0.44
CNN3-203ENST00000415017 PIGGQ5H8A4 983 aa12.32□□□□□ -0.44
CNN3-203ENST00000415017 C6orf163Q5TEZ5 329 aa12.32□□□□□ -0.44
CNN3-203ENST00000415017 NPSR1Q6W5P4 371 aa12.32□□□□□ -0.44
CNN3-203ENST00000415017 RNF111Q6ZNA4 994 aa12.32□□□□□ -0.44
CNN3-203ENST00000415017 RNF130Q86XS8 419 aa12.32□□□□□ -0.44
CNN3-203ENST00000415017 PTOV1Q86YD1 416 aa12.32□□□□□ -0.44
CNN3-203ENST00000415017 DEFB107AQ8IZN7 70 aa12.32□□□□□ -0.44
CNN3-203ENST00000415017 HORMAD2Q8N7B1 307 aa12.32□□□□□ -0.44
CNN3-203ENST00000415017 SLC16A11Q8NCK7 471 aa12.32□□□□□ -0.44
CNN3-203ENST00000415017 FAM110BQ8TC76 370 aa12.32□□□□□ -0.44
CNN3-203ENST00000415017 PSMF1Q92530 271 aa12.32□□□□□ -0.44
CNN3-203ENST00000415017 TP53INP1Q96A56 240 aa12.32□□□□□ -0.44
CNN3-203ENST00000415017 SLC35A4Q96G79 324 aa12.32□□□□□ -0.44
CNN3-203ENST00000415017 CCNL2Q96S94 520 aaPredicted RBP12.32□□□□□ -0.44
CNN3-203ENST00000415017 SPATA9Q9BWV2 254 aa12.32□□□□□ -0.44
CNN3-203ENST00000415017 CADM1Q9BY67 442 aaKnown RBP12.32□□□□□ -0.44
CNN3-203ENST00000415017 TRIM8Q9BZR9 551 aa12.32□□□□□ -0.44
CNN3-203ENST00000415017 WWTR1Q9GZV5 400 aa12.32□□□□□ -0.44
CNN3-203ENST00000415017 PIGUQ9H490 435 aa12.32□□□□□ -0.44
CNN3-203ENST00000415017 TMEM38AQ9H6F2 299 aa12.32□□□□□ -0.44
CNN3-203ENST00000415017 PRODH2Q9UF12 536 aa12.32□□□□□ -0.44
CNN3-203ENST00000415017 FBXL4Q9UKA2 621 aa12.32□□□□□ -0.44
CNN3-203ENST00000415017 PTPRQQ9UMZ3 2332 aa12.31□□□□□ -0.44
CNN3-203ENST00000415017 PRORSD1PA6NEY8 169 aa12.31□□□□□ -0.44
CNN3-203ENST00000415017 ZNF891A8MT65 544 aaPredicted RBP12.31□□□□□ -0.44
CNN3-203ENST00000415017 EVPLLA8MZ36 301 aa12.31□□□□□ -0.44
CNN3-203ENST00000415017 NKX2-8O15522 239 aa12.31□□□□□ -0.44
CNN3-203ENST00000415017 DNAJA2O60884 412 aa12.31□□□□□ -0.44
CNN3-203ENST00000415017 NME6O75414 186 aaPredicted RBP12.31□□□□□ -0.44
CNN3-203ENST00000415017 SERPINA7P05543 415 aa12.31□□□□□ -0.44
CNN3-203ENST00000415017 TFPTP0C1Z6 253 aa12.31□□□□□ -0.44
CNN3-203ENST00000415017 MATN1P21941 496 aa12.31□□□□□ -0.44
CNN3-203ENST00000415017 CHI3L1P36222 383 aaPredicted RBP12.31□□□□□ -0.44
CNN3-203ENST00000415017 PRIM2P49643 509 aa12.31□□□□□ -0.44
CNN3-203ENST00000415017 DCAF7P61962 342 aa12.31□□□□□ -0.44
CNN3-203ENST00000415017 PSPHP78330 225 aa12.31□□□□□ -0.44
CNN3-203ENST00000415017 CEACAM7Q14002 265 aa12.31□□□□□ -0.44
CNN3-203ENST00000415017 LASP1Q14847 261 aaKnown RBP12.31□□□□□ -0.44
CNN3-203ENST00000415017 DUSP5Q16690 384 aa12.31□□□□□ -0.44
CNN3-203ENST00000415017 SPDYE7PQ495Y7 208 aa12.31□□□□□ -0.44
CNN3-203ENST00000415017 DCAF10Q5QP82 559 aa12.31□□□□□ -0.44
CNN3-203ENST00000415017 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.31□□□□□ -0.44
CNN3-203ENST00000415017 HSDL2Q6YN16 418 aa12.31□□□□□ -0.44
CNN3-203ENST00000415017 CHDHQ8NE62 594 aaPredicted RBP12.31□□□□□ -0.44
CNN3-203ENST00000415017 SNRNP27Q8WVK2 155 aaKnown RBP12.31□□□□□ -0.44
CNN3-203ENST00000415017 SLC35G5Q96KT7 338 aa12.31□□□□□ -0.44
CNN3-203ENST00000415017 OR7D2Q96RA2 312 aa12.31□□□□□ -0.44
CNN3-203ENST00000415017 CDRT15Q96T59 188 aa12.31□□□□□ -0.44
CNN3-203ENST00000415017 THUMPD3Q9BV44 507 aaKnown RBP12.31□□□□□ -0.44
CNN3-203ENST00000415017 ITPAQ9BY32 194 aa12.31□□□□□ -0.44
CNN3-203ENST00000415017 OR51I1Q9H343 314 aa12.31□□□□□ -0.44
CNN3-203ENST00000415017 MMADHCQ9H3L0 296 aaPredicted RBP12.31□□□□□ -0.44
CNN3-203ENST00000415017 ZNF160Q9HCG1 818 aa12.31□□□□□ -0.44
CNN3-203ENST00000415017 THUMPD1Q9NXG2 353 aaKnown RBP12.31□□□□□ -0.44
CNN3-203ENST00000415017 COPS7AQ9UBW8 275 aa12.31□□□□□ -0.44
CNN3-203ENST00000415017 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.31□□□□□ -0.44
CNN3-203ENST00000415017 BCAP29Q9UHQ4 241 aa12.31□□□□□ -0.44
CNN3-203ENST00000415017 A0A087WV48 116 aa12.3□□□□□ -0.44
CNN3-203ENST00000415017 FRG2CA6NGY1 282 aa12.3□□□□□ -0.44
CNN3-203ENST00000415017 DUXAA6NLW8 204 aa12.3□□□□□ -0.44
CNN3-203ENST00000415017 TAF4O00268 1085 aa12.3□□□□□ -0.44
CNN3-203ENST00000415017 GYG2O15488 501 aa12.3□□□□□ -0.44
CNN3-203ENST00000415017 ZZEF1O43149 2961 aa12.3□□□□□ -0.44
CNN3-203ENST00000415017 KLK10O43240 276 aa12.3□□□□□ -0.44
CNN3-203ENST00000415017 DNAJC8O75937 253 aaPredicted RBP12.3□□□□□ -0.44
CNN3-203ENST00000415017 NADKO95544 446 aaPredicted RBP12.3□□□□□ -0.44
CNN3-203ENST00000415017 AGR2O95994 175 aa12.3□□□□□ -0.44
CNN3-203ENST00000415017 CELA2AP08217 269 aa12.3□□□□□ -0.44
CNN3-203ENST00000415017 NUDT7P0C024 238 aa12.3□□□□□ -0.44
CNN3-203ENST00000415017 ARAFP10398 606 aa12.3□□□□□ -0.44
CNN3-203ENST00000415017 ETFAP13804 333 aa12.3□□□□□ -0.44
CNN3-203ENST00000415017 GSK3BP49841 420 aa12.3□□□□□ -0.44
CNN3-203ENST00000415017 KHKP50053 298 aa12.3□□□□□ -0.44
CNN3-203ENST00000415017 PRKAG1P54619 331 aa12.3□□□□□ -0.44
CNN3-203ENST00000415017 RPS26P62854 115 aaKnown RBP12.3□□□□□ -0.44
CNN3-203ENST00000415017 RBBP4Q09028 425 aa12.3□□□□□ -0.44
CNN3-203ENST00000415017 FUT5Q11128 374 aa12.3□□□□□ -0.44
CNN3-203ENST00000415017 CDC20Q12834 499 aa12.3□□□□□ -0.44
CNN3-203ENST00000415017 BTBD16Q32M84 506 aa12.3□□□□□ -0.44
CNN3-203ENST00000415017 JMJD6Q6NYC1 403 aaPredicted RBP12.3□□□□□ -0.44
CNN3-203ENST00000415017 PTRH1Q86Y79 214 aaKnown RBP12.3□□□□□ -0.44
CNN3-203ENST00000415017 SPACA3Q8IXA5 215 aa12.3□□□□□ -0.44
CNN3-203ENST00000415017 ZZZ3Q8IYH5 903 aa12.3□□□□□ -0.44
CNN3-203ENST00000415017 KIF2BQ8N4N8 673 aa12.3□□□□□ -0.44
CNN3-203ENST00000415017 METTL25Q8N6Q8 603 aa12.3□□□□□ -0.44
CNN3-203ENST00000415017 TMEM102Q8N9M5 508 aaPredicted RBP12.3□□□□□ -0.44
CNN3-203ENST00000415017 OR10A6Q8NH74 314 aa12.3□□□□□ -0.44
CNN3-203ENST00000415017 PNPT1Q8TCS8 783 aaKnown RBP12.3□□□□□ -0.44
CNN3-203ENST00000415017 REXO5Q96IC2 774 aaKnown RBP12.3□□□□□ -0.44
CNN3-203ENST00000415017 MAGED4Q96JG8 741 aa12.3□□□□□ -0.44
CNN3-203ENST00000415017 SAP130Q9H0E3 1048 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms