RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 ZNF300Q96RE9 604 aaPredicted RBP11.32□□□□□ -0.6
PTPRF-205ENST00000414879 HDHD5Q9BXW7 423 aa11.32□□□□□ -0.6
PTPRF-205ENST00000414879 RBCK1Q9BYM8 510 aa11.32□□□□□ -0.6
PTPRF-205ENST00000414879 SEMA6CQ9H3T2 930 aa11.32□□□□□ -0.6
PTPRF-205ENST00000414879 MEMO1Q9Y316 297 aa11.32□□□□□ -0.6
PTPRF-205ENST00000414879 PDE4DIPQ5VU43 2346 aa11.32□□□□□ -0.6
PTPRF-205ENST00000414879 TLCD2A6NGC4 264 aa11.32□□□□□ -0.6
PTPRF-205ENST00000414879 SLC9B1P1A6NJY1 282 aa11.32□□□□□ -0.6
PTPRF-205ENST00000414879 PRKYO43930 277 aa11.32□□□□□ -0.6
PTPRF-205ENST00000414879 NDUFB2O95178 105 aa11.32□□□□□ -0.6
PTPRF-205ENST00000414879 CPMP14384 443 aa11.32□□□□□ -0.6
PTPRF-205ENST00000414879 SLC6A9P48067 706 aa11.32□□□□□ -0.6
PTPRF-205ENST00000414879 SLC5A12Q1EHB4 618 aa11.32□□□□□ -0.6
PTPRF-205ENST00000414879 DEFB133Q30KQ1 61 aa11.32□□□□□ -0.6
PTPRF-205ENST00000414879 LRIT3Q3SXY7 679 aa11.32□□□□□ -0.6
PTPRF-205ENST00000414879 OPN5Q6U736 354 aa11.32□□□□□ -0.6
PTPRF-205ENST00000414879 ASB18Q6ZVZ8 466 aa11.32□□□□□ -0.6
PTPRF-205ENST00000414879 CYP4V2Q6ZWL3 525 aaPredicted RBP11.32□□□□□ -0.6
PTPRF-205ENST00000414879 SHFQ7M4L6 423 aa11.32□□□□□ -0.6
PTPRF-205ENST00000414879 OR4K5Q8NGD3 323 aa11.32□□□□□ -0.6
PTPRF-205ENST00000414879 OLIG1Q8TAK6 271 aa11.32□□□□□ -0.6
PTPRF-205ENST00000414879 NSMAFQ92636 917 aa11.32□□□□□ -0.6
PTPRF-205ENST00000414879 SLC41A3Q96GZ6 507 aa11.32□□□□□ -0.6
PTPRF-205ENST00000414879 ARHGAP9Q9BRR9 750 aa11.32□□□□□ -0.6
PTPRF-205ENST00000414879 FAM118AQ9NWS6 357 aa11.32□□□□□ -0.6
PTPRF-205ENST00000414879 SCN4AP35499 1836 aa11.32□□□□□ -0.6
PTPRF-205ENST00000414879 A8MVJ9 347 aa11.32□□□□□ -0.6
PTPRF-205ENST00000414879 C17orf105B2RV13 164 aa11.32□□□□□ -0.6
PTPRF-205ENST00000414879 J3QLW9 94 aa11.32□□□□□ -0.6
PTPRF-205ENST00000414879 ZNF208O43345 1280 aa11.32□□□□□ -0.6
PTPRF-205ENST00000414879 SCO2O43819 266 aa11.32□□□□□ -0.6
PTPRF-205ENST00000414879 ZNF19P17023 458 aa11.32□□□□□ -0.6
PTPRF-205ENST00000414879 MYF6P23409 242 aa11.32□□□□□ -0.6
PTPRF-205ENST00000414879 SLC43A2Q8N370 569 aa11.32□□□□□ -0.6
PTPRF-205ENST00000414879 METTL27Q8N6F8 245 aaPredicted RBP11.32□□□□□ -0.6
PTPRF-205ENST00000414879 ACBD7Q8N6N7 88 aa11.32□□□□□ -0.6
PTPRF-205ENST00000414879 PRRC1Q96M27 445 aa11.32□□□□□ -0.6
PTPRF-205ENST00000414879 C1QTNF3Q9BXJ4 246 aa11.32□□□□□ -0.6
PTPRF-205ENST00000414879 SLC22A4Q9H015 551 aa11.32□□□□□ -0.6
PTPRF-205ENST00000414879 HPF1Q9NWY4 346 aa11.32□□□□□ -0.6
PTPRF-205ENST00000414879 TEX13CA0A0J9YWL9 993 aa11.31□□□□□ -0.6
PTPRF-205ENST00000414879 GABRR3A8MPY1 467 aa11.31□□□□□ -0.6
PTPRF-205ENST00000414879 CDC123O75794 336 aaPredicted RBP11.31□□□□□ -0.6
PTPRF-205ENST00000414879 CSTBP04080 98 aaKnown RBP11.31□□□□□ -0.6
PTPRF-205ENST00000414879 OR3A3P47888 321 aa11.31□□□□□ -0.6
PTPRF-205ENST00000414879 OR3A2P47893 321 aa11.31□□□□□ -0.6
PTPRF-205ENST00000414879 PER3P56645 1201 aa11.31□□□□□ -0.6
PTPRF-205ENST00000414879 RAB2AP61019 212 aa11.31□□□□□ -0.6
PTPRF-205ENST00000414879 E2F1Q01094 437 aa11.31□□□□□ -0.6
PTPRF-205ENST00000414879 TSTQ16762 297 aaKnown RBP11.31□□□□□ -0.6
PTPRF-205ENST00000414879 MEP1AQ16819 746 aa11.31□□□□□ -0.6
PTPRF-205ENST00000414879 GDPGP1Q6ZNW5 385 aa11.31□□□□□ -0.6
PTPRF-205ENST00000414879 HS3ST5Q8IZT8 346 aa11.31□□□□□ -0.6
PTPRF-205ENST00000414879 MUS81Q96NY9 551 aa11.31□□□□□ -0.6
PTPRF-205ENST00000414879 BCL2L14Q9BZR8 327 aa11.31□□□□□ -0.6
PTPRF-205ENST00000414879 CHMP1AQ9HD42 196 aaPredicted RBP11.31□□□□□ -0.6
PTPRF-205ENST00000414879 AMBNQ9NP70 447 aa11.31□□□□□ -0.6
PTPRF-205ENST00000414879 MKL2Q9ULH7 1088 aa11.31□□□□□ -0.6
PTPRF-205ENST00000414879 SLC5A10A0PJK1 596 aa11.31□□□□□ -0.6
PTPRF-205ENST00000414879 TNFRSF21O75509 655 aa11.31□□□□□ -0.6
PTPRF-205ENST00000414879 ZFAND5O76080 213 aa11.31□□□□□ -0.6
PTPRF-205ENST00000414879 CFL1P23528 166 aaKnown RBP11.31□□□□□ -0.6
PTPRF-205ENST00000414879 PKLRP30613 574 aa11.31□□□□□ -0.6
PTPRF-205ENST00000414879 FOXA1P55317 472 aa11.31□□□□□ -0.6
PTPRF-205ENST00000414879 TSPAN5P62079 268 aa11.31□□□□□ -0.6
PTPRF-205ENST00000414879 TNFRSF17Q02223 184 aa11.31□□□□□ -0.6
PTPRF-205ENST00000414879 ST3GAL4Q11206 333 aa11.31□□□□□ -0.6
PTPRF-205ENST00000414879 CAMK1Q14012 370 aa11.31□□□□□ -0.6
PTPRF-205ENST00000414879 PRAMEF8Q5VWM4 474 aa11.31□□□□□ -0.6
PTPRF-205ENST00000414879 PRAMEF7Q5VXH5 474 aa11.31□□□□□ -0.6
PTPRF-205ENST00000414879 LILRA6Q6PI73 481 aa11.31□□□□□ -0.6
PTPRF-205ENST00000414879 FAM83HQ6ZRV2 1179 aaPredicted RBP11.31□□□□□ -0.6
PTPRF-205ENST00000414879 NAGSQ8N159 534 aa11.31□□□□□ -0.6
PTPRF-205ENST00000414879 C1orf216Q8TAB5 229 aa11.31□□□□□ -0.6
PTPRF-205ENST00000414879 CXXC1Q9P0U4 656 aaPredicted RBP11.31□□□□□ -0.6
PTPRF-205ENST00000414879 A6NCN8 305 aa11.31□□□□□ -0.6
PTPRF-205ENST00000414879 FLRT2O43155 660 aa11.31□□□□□ -0.6
PTPRF-205ENST00000414879 TSC22D2O75157 780 aa11.31□□□□□ -0.6
PTPRF-205ENST00000414879 SOX14O95416 240 aa11.31□□□□□ -0.6
PTPRF-205ENST00000414879 PRKACGP22612 351 aa11.31□□□□□ -0.6
PTPRF-205ENST00000414879 AK4P27144 223 aaPredicted RBP11.31□□□□□ -0.6
PTPRF-205ENST00000414879 OR2B6P58173 313 aa11.31□□□□□ -0.6
PTPRF-205ENST00000414879 EIF5AP63241 154 aaKnown RBP11.31□□□□□ -0.6
PTPRF-205ENST00000414879 CRYZQ08257 329 aaKnown RBP11.31□□□□□ -0.6
PTPRF-205ENST00000414879 ADAM15Q13444 863 aa11.31□□□□□ -0.6
PTPRF-205ENST00000414879 BPHLQ86WA6 291 aaPredicted RBP11.31□□□□□ -0.6
PTPRF-205ENST00000414879 OR2L3Q8NG85 312 aa11.31□□□□□ -0.6
PTPRF-205ENST00000414879 OR5T3Q8NGG3 340 aa11.31□□□□□ -0.6
PTPRF-205ENST00000414879 MYADMQ96S97 322 aa11.31□□□□□ -0.6
PTPRF-205ENST00000414879 ZDHHC5Q9C0B5 715 aa11.31□□□□□ -0.6
PTPRF-205ENST00000414879 ZNF222Q9UK12 451 aa11.31□□□□□ -0.6
PTPRF-205ENST00000414879 NAALAD2Q9Y3Q0 740 aa11.31□□□□□ -0.6
PTPRF-205ENST00000414879 FMO6PO60774 539 aa11.3□□□□□ -0.6
PTPRF-205ENST00000414879 ADORA3P0DMS8 318 aa11.3□□□□□ -0.6
PTPRF-205ENST00000414879 UGT2B7P16662 529 aa11.3□□□□□ -0.6
PTPRF-205ENST00000414879 XCR1P46094 333 aa11.3□□□□□ -0.6
PTPRF-205ENST00000414879 EPHA5P54756 1037 aa11.3□□□□□ -0.6
PTPRF-205ENST00000414879 OR12D2P58182 307 aa11.3□□□□□ -0.6
PTPRF-205ENST00000414879 HSD11B2P80365 405 aa11.3□□□□□ -0.6
PTPRF-205ENST00000414879 CBFBQ13951 182 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms