RNA–Protein interactions for RNA: ENST00000414558.2

ATG4C-204, Transcript of autophagy related 4C cysteine peptidase, humanhuman

TSL 5

Gene ATG4C, Length 464 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-204ENST00000414558 RPH3AQ9Y2J0 694 aaPredicted RBP3.35□□□□□ -1.87
ATG4C-204ENST00000414558 MAT2AP31153 395 aaKnown RBP3.34□□□□□ -1.87
ATG4C-204ENST00000414558 UGT1A3P35503 534 aa3.34□□□□□ -1.87
ATG4C-204ENST00000414558 TCF7P36402 384 aaPredicted RBP3.34□□□□□ -1.87
ATG4C-204ENST00000414558 RPS8P62241 208 aaKnown RBP3.34□□□□□ -1.87
ATG4C-204ENST00000414558 BNIP1Q12981 228 aa3.34□□□□□ -1.87
ATG4C-204ENST00000414558 DCAF4L1Q3SXM0 396 aa3.34□□□□□ -1.87
ATG4C-204ENST00000414558 LGSNQ5TDP6 509 aa3.34□□□□□ -1.87
ATG4C-204ENST00000414558 PP632Q6XCG6 107 aa3.34□□□□□ -1.87
ATG4C-204ENST00000414558 KCTD9Q7L273 389 aa3.34□□□□□ -1.87
ATG4C-204ENST00000414558 TSEN54Q7Z6J9 526 aaKnown RBP3.34□□□□□ -1.87
ATG4C-204ENST00000414558 ERI1Q8IV48 349 aaKnown RBP3.34□□□□□ -1.87
ATG4C-204ENST00000414558 MCOLN2Q8IZK6 566 aa3.34□□□□□ -1.87
ATG4C-204ENST00000414558 NAT8LQ8N9F0 302 aa3.34□□□□□ -1.87
ATG4C-204ENST00000414558 OR52J3Q8NH60 311 aa3.34□□□□□ -1.87
ATG4C-204ENST00000414558 RAB39BQ96DA2 213 aa3.34□□□□□ -1.87
ATG4C-204ENST00000414558 SLC25A38Q96DW6 304 aa3.34□□□□□ -1.87
ATG4C-204ENST00000414558 ADPGKQ9BRR6 497 aa3.34□□□□□ -1.87
ATG4C-204ENST00000414558 CACNG6Q9BXT2 260 aa3.34□□□□□ -1.87
ATG4C-204ENST00000414558 AKIRIN1Q9H9L7 192 aaPredicted RBP3.34□□□□□ -1.87
ATG4C-204ENST00000414558 KCNMB3Q9NPA1 279 aa3.34□□□□□ -1.87
ATG4C-204ENST00000414558 HPS4Q9NQG7 708 aa3.34□□□□□ -1.87
ATG4C-204ENST00000414558 EXOSC3Q9NQT5 275 aaKnown RBP3.34□□□□□ -1.87
ATG4C-204ENST00000414558 RTN2O75298 545 aa3.33□□□□□ -1.88
ATG4C-204ENST00000414558 ECDO95905 644 aaPredicted RBP3.33□□□□□ -1.88
ATG4C-204ENST00000414558 GSTA1P08263 222 aa3.33□□□□□ -1.88
ATG4C-204ENST00000414558 FERP16591 822 aa3.33□□□□□ -1.88
ATG4C-204ENST00000414558 UGT1A6P19224 532 aa3.33□□□□□ -1.88
ATG4C-204ENST00000414558 PRR4Q16378 134 aa3.33□□□□□ -1.88
ATG4C-204ENST00000414558 IL17AQ16552 155 aa3.33□□□□□ -1.88
ATG4C-204ENST00000414558 CCDC14Q49A88 953 aa3.33□□□□□ -1.88
ATG4C-204ENST00000414558 GPAT3Q53EU6 434 aa3.33□□□□□ -1.88
ATG4C-204ENST00000414558 IFI44LQ53G44 452 aa3.33□□□□□ -1.88
ATG4C-204ENST00000414558 MEDAGQ5VYS4 303 aa3.33□□□□□ -1.88
ATG4C-204ENST00000414558 Q6P435 159 aa3.33□□□□□ -1.88
ATG4C-204ENST00000414558 ZCCHC12Q6PEW1 402 aa3.33□□□□□ -1.88
ATG4C-204ENST00000414558 PRSS42Q7Z5A4 293 aa3.33□□□□□ -1.88
ATG4C-204ENST00000414558 SLC22A16Q86VW1 577 aa3.33□□□□□ -1.88
ATG4C-204ENST00000414558 LINC01555Q8NAE3 123 aa3.33□□□□□ -1.88
ATG4C-204ENST00000414558 OR4A16Q8NH70 328 aa3.33□□□□□ -1.88
ATG4C-204ENST00000414558 FIBINQ8TAL6 211 aa3.33□□□□□ -1.88
ATG4C-204ENST00000414558 FAM104AQ969W3 186 aa3.33□□□□□ -1.88
ATG4C-204ENST00000414558 ACCSQ96QU6 501 aa3.33□□□□□ -1.88
ATG4C-204ENST00000414558 GRPEL1Q9HAV7 217 aa3.33□□□□□ -1.88
ATG4C-204ENST00000414558 NARFQ9UHQ1 456 aa3.33□□□□□ -1.88
ATG4C-204ENST00000414558 MAD2L2Q9UI95 211 aa3.33□□□□□ -1.88
ATG4C-204ENST00000414558 A0A0J9YVX5 310 aa3.32□□□□□ -1.88
ATG4C-204ENST00000414558 H0Y626 953 aa3.32□□□□□ -1.88
ATG4C-204ENST00000414558 PDLIM1O00151 329 aa3.32□□□□□ -1.88
ATG4C-204ENST00000414558 WWP2O00308 870 aa3.32□□□□□ -1.88
ATG4C-204ENST00000414558 SLC28A1O00337 649 aa3.32□□□□□ -1.88
ATG4C-204ENST00000414558 EEF2KO00418 725 aaKnown RBP3.32□□□□□ -1.88
ATG4C-204ENST00000414558 ARPC1BO15143 372 aaKnown RBP3.32□□□□□ -1.88
ATG4C-204ENST00000414558 UROSP10746 265 aa3.32□□□□□ -1.88
ATG4C-204ENST00000414558 ACVR1BP36896 505 aa3.32□□□□□ -1.88
ATG4C-204ENST00000414558 PUDPQ08623 228 aa3.32□□□□□ -1.88
ATG4C-204ENST00000414558 NPRL3Q12980 569 aa3.32□□□□□ -1.88
ATG4C-204ENST00000414558 ORC2Q13416 577 aaPredicted RBP3.32□□□□□ -1.88
ATG4C-204ENST00000414558 FAM133BQ5BKY9 247 aaKnown RBP3.32□□□□□ -1.88
ATG4C-204ENST00000414558 SPATA46Q5T0L3 261 aa3.32□□□□□ -1.88
ATG4C-204ENST00000414558 NKAIN2Q5VXU1 208 aa3.32□□□□□ -1.88
ATG4C-204ENST00000414558 HIST2H2AA3Q6FI13 130 aa3.32□□□□□ -1.88
ATG4C-204ENST00000414558 PRR5LQ6MZQ0 368 aa3.32□□□□□ -1.88
ATG4C-204ENST00000414558 CWC27Q6UX04 472 aaKnown RBP3.32□□□□□ -1.88
ATG4C-204ENST00000414558 TMEM179BQ7Z7N9 219 aa3.32□□□□□ -1.88
ATG4C-204ENST00000414558 RANBP3LQ86VV4 465 aaPredicted RBP3.32□□□□□ -1.88
ATG4C-204ENST00000414558 GPR137Q96N19 417 aa3.32□□□□□ -1.88
ATG4C-204ENST00000414558 TRPC4Q9UBN4 977 aa3.32□□□□□ -1.88
ATG4C-204ENST00000414558 MEGF6O75095 1541 aa3.32□□□□□ -1.88
ATG4C-204ENST00000414558 TRBV7-9A0A0J9YWB2 115 aa3.31□□□□□ -1.88
ATG4C-204ENST00000414558 OR7A17O14581 309 aa3.31□□□□□ -1.88
ATG4C-204ENST00000414558 NOL4O94818 638 aa3.31□□□□□ -1.88
ATG4C-204ENST00000414558 PGK1P00558 417 aa3.31□□□□□ -1.88
ATG4C-204ENST00000414558 APRTP07741 180 aa3.31□□□□□ -1.88
ATG4C-204ENST00000414558 HIST1H2AGP0C0S8 130 aaPredicted RBP3.31□□□□□ -1.88
ATG4C-204ENST00000414558 CTNNB1P35222 781 aa3.31□□□□□ -1.88
ATG4C-204ENST00000414558 SMSP52788 366 aa3.31□□□□□ -1.88
ATG4C-204ENST00000414558 EIF2B1Q14232 305 aaKnown RBP3.31□□□□□ -1.88
ATG4C-204ENST00000414558 B3GLCTQ6Y288 498 aa3.31□□□□□ -1.88
ATG4C-204ENST00000414558 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.31□□□□□ -1.88
ATG4C-204ENST00000414558 C9orf40Q8IXQ3 194 aa3.31□□□□□ -1.88
ATG4C-204ENST00000414558 CHCHD4Q8N4Q1 142 aa3.31□□□□□ -1.88
ATG4C-204ENST00000414558 HIST1H2ACQ93077 130 aa3.31□□□□□ -1.88
ATG4C-204ENST00000414558 APOOQ9BUR5 198 aa3.31□□□□□ -1.88
ATG4C-204ENST00000414558 TSSK1BQ9BXA7 367 aa3.31□□□□□ -1.88
ATG4C-204ENST00000414558 Q9H3A6 140 aa3.31□□□□□ -1.88
ATG4C-204ENST00000414558 ALG9Q9H6U8 611 aa3.31□□□□□ -1.88
ATG4C-204ENST00000414558 ZCCHC3Q9NUD5 404 aaKnown RBP3.31□□□□□ -1.88
ATG4C-204ENST00000414558 ENTPD4Q9Y227 616 aa3.31□□□□□ -1.88
ATG4C-204ENST00000414558 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.3□□□□□ -1.88
ATG4C-204ENST00000414558 FUT3P21217 361 aa3.3□□□□□ -1.88
ATG4C-204ENST00000414558 UCP2P55851 309 aa3.3□□□□□ -1.88
ATG4C-204ENST00000414558 IL18R1Q13478 541 aa3.3□□□□□ -1.88
ATG4C-204ENST00000414558 ZNF528Q3MIS6 628 aa3.3□□□□□ -1.88
ATG4C-204ENST00000414558 NFAM1Q8NET5 270 aaPredicted RBP3.3□□□□□ -1.88
ATG4C-204ENST00000414558 DNAJA3Q96EY1 480 aa3.3□□□□□ -1.88
ATG4C-204ENST00000414558 C11orf24Q96F05 449 aaPredicted RBP3.3□□□□□ -1.88
ATG4C-204ENST00000414558 PURGQ9UJV8 347 aaKnown RBP3.3□□□□□ -1.88
ATG4C-204ENST00000414558 BARX2Q9UMQ3 279 aaPredicted RBP3.3□□□□□ -1.88
ATG4C-204ENST00000414558 STX8Q9UNK0 236 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms