RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 DUSP12Q9UNI6 340 aa3.96□□□□□ -1.78
HMGB3P31-201ENST00000413333 AUP1Q9Y679 476 aa3.96□□□□□ -1.78
HMGB3P31-201ENST00000413333 SALL1Q9NSC2 1324 aa3.95□□□□□ -1.78
HMGB3P31-201ENST00000413333 TEX48A0A1B0GUV7 120 aa3.95□□□□□ -1.78
HMGB3P31-201ENST00000413333 LRIT2A6NDA9 550 aa3.95□□□□□ -1.78
HMGB3P31-201ENST00000413333 RNF212BA8MTL3 300 aa3.95□□□□□ -1.78
HMGB3P31-201ENST00000413333 K7EQG2 157 aa3.95□□□□□ -1.78
HMGB3P31-201ENST00000413333 CASKO14936 926 aa3.95□□□□□ -1.78
HMGB3P31-201ENST00000413333 XPO1O14980 1071 aaKnown RBP3.95□□□□□ -1.78
HMGB3P31-201ENST00000413333 LINC01565O15544 149 aa3.95□□□□□ -1.78
HMGB3P31-201ENST00000413333 SNAP91O60641 907 aa3.95□□□□□ -1.78
HMGB3P31-201ENST00000413333 JAK2O60674 1132 aa3.95□□□□□ -1.78
HMGB3P31-201ENST00000413333 PDE5AO76074 875 aa3.95□□□□□ -1.78
HMGB3P31-201ENST00000413333 SORBS2O94875 1100 aaKnown RBP3.95□□□□□ -1.78
HMGB3P31-201ENST00000413333 ANP32DO95626 131 aa3.95□□□□□ -1.78
HMGB3P31-201ENST00000413333 POP4O95707 220 aaKnown RBP3.95□□□□□ -1.78
HMGB3P31-201ENST00000413333 IGKV3-20P01619 116 aa3.95□□□□□ -1.78
HMGB3P31-201ENST00000413333 HSD17B1P14061 328 aa3.95□□□□□ -1.78
HMGB3P31-201ENST00000413333 RIDAP52758 137 aaKnown RBP3.95□□□□□ -1.78
HMGB3P31-201ENST00000413333 CRIP2P52943 208 aaPredicted RBP3.95□□□□□ -1.78
HMGB3P31-201ENST00000413333 VCPP55072 806 aaKnown RBP3.95□□□□□ -1.78
HMGB3P31-201ENST00000413333 ANKRD55Q3KP44 614 aa3.95□□□□□ -1.78
HMGB3P31-201ENST00000413333 POM121L1PQ3SYA9 428 aa3.95□□□□□ -1.78
HMGB3P31-201ENST00000413333 ATAD3BQ5T9A4 648 aa3.95□□□□□ -1.78
HMGB3P31-201ENST00000413333 BLOC1S2Q6QNY1 142 aa3.95□□□□□ -1.78
HMGB3P31-201ENST00000413333 ATRAIDQ6UW56 229 aa3.95□□□□□ -1.78
HMGB3P31-201ENST00000413333 KDELC1Q6UW63 502 aa3.95□□□□□ -1.78
HMGB3P31-201ENST00000413333 NET1Q7Z628 596 aaPredicted RBP3.95□□□□□ -1.78
HMGB3P31-201ENST00000413333 TSEN54Q7Z6J9 526 aaKnown RBP3.95□□□□□ -1.78
HMGB3P31-201ENST00000413333 ZNF329Q86UD4 541 aa3.95□□□□□ -1.78
HMGB3P31-201ENST00000413333 LCA5Q86VQ0 697 aa3.95□□□□□ -1.78
HMGB3P31-201ENST00000413333 ZDHHC21Q8IVQ6 265 aa3.95□□□□□ -1.78
HMGB3P31-201ENST00000413333 SSC4DQ8WTU2 575 aa3.95□□□□□ -1.78
HMGB3P31-201ENST00000413333 DLX4Q92988 240 aaPredicted RBP3.95□□□□□ -1.78
HMGB3P31-201ENST00000413333 ELMO2Q96JJ3 720 aa3.95□□□□□ -1.78
HMGB3P31-201ENST00000413333 TESK2Q96S53 571 aa3.95□□□□□ -1.78
HMGB3P31-201ENST00000413333 HSD17B14Q9BPX1 270 aa3.95□□□□□ -1.78
HMGB3P31-201ENST00000413333 CRACR2AQ9BSW2 395 aa3.95□□□□□ -1.78
HMGB3P31-201ENST00000413333 FGFBP2Q9BYJ0 223 aa3.95□□□□□ -1.78
HMGB3P31-201ENST00000413333 RMND5AQ9H871 391 aa3.95□□□□□ -1.78
HMGB3P31-201ENST00000413333 LPAR2Q9HBW0 351 aa3.95□□□□□ -1.78
HMGB3P31-201ENST00000413333 AGPAT5Q9NUQ2 364 aa3.95□□□□□ -1.78
HMGB3P31-201ENST00000413333 DCAF13Q9NV06 445 aaKnown RBP3.95□□□□□ -1.78
HMGB3P31-201ENST00000413333 DUS2Q9NX74 493 aaKnown RBP3.95□□□□□ -1.78
HMGB3P31-201ENST00000413333 RARRES3Q9UL19 164 aa3.95□□□□□ -1.78
HMGB3P31-201ENST00000413333 B9D1Q9UPM9 204 aa3.95□□□□□ -1.78
HMGB3P31-201ENST00000413333 SF3B1O75533 1304 aaKnown RBP eCLIP3.95□□□□□ -1.78
HMGB3P31-201ENST00000413333 FER1L5A0AVI2 2057 aa3.94□□□□□ -1.78
HMGB3P31-201ENST00000413333 NOTCH4Q99466 2003 aa3.94□□□□□ -1.78
HMGB3P31-201ENST00000413333 NPIPA5A0A0B4J1W7 369 aa3.94□□□□□ -1.78
HMGB3P31-201ENST00000413333 ASB14A6NK59 587 aa3.94□□□□□ -1.78
HMGB3P31-201ENST00000413333 WASHC1A8K0Z3 465 aa3.94□□□□□ -1.78
HMGB3P31-201ENST00000413333 A8MUI8 341 aa3.94□□□□□ -1.78
HMGB3P31-201ENST00000413333 NPIPA5E9PKD4 350 aa3.94□□□□□ -1.78
HMGB3P31-201ENST00000413333 MCF2LO15068 1137 aa3.94□□□□□ -1.78
HMGB3P31-201ENST00000413333 FCGR3AP08637 254 aa3.94□□□□□ -1.78
HMGB3P31-201ENST00000413333 CCDC159P0C7I6 412 aa3.94□□□□□ -1.78
HMGB3P31-201ENST00000413333 UQCRBP14927 111 aa3.94□□□□□ -1.78
HMGB3P31-201ENST00000413333 RPA2P15927 270 aa3.94□□□□□ -1.78
HMGB3P31-201ENST00000413333 UGT1A4P22310 534 aa3.94□□□□□ -1.78
HMGB3P31-201ENST00000413333 PAX7P23759 505 aa3.94□□□□□ -1.78
HMGB3P31-201ENST00000413333 PPP2R1BP30154 601 aa3.94□□□□□ -1.78
HMGB3P31-201ENST00000413333 CAPGP40121 348 aa3.94□□□□□ -1.78
HMGB3P31-201ENST00000413333 ATP4BP51164 291 aa3.94□□□□□ -1.78
HMGB3P31-201ENST00000413333 HAND2P61296 217 aa3.94□□□□□ -1.78
HMGB3P31-201ENST00000413333 OSTNP61366 133 aa3.94□□□□□ -1.78
HMGB3P31-201ENST00000413333 ZP4Q12836 540 aa3.94□□□□□ -1.78
HMGB3P31-201ENST00000413333 HNRNPA0Q13151 305 aaKnown RBP3.94□□□□□ -1.78
HMGB3P31-201ENST00000413333 TFDP1Q14186 410 aa3.94□□□□□ -1.78
HMGB3P31-201ENST00000413333 PDK4Q16654 411 aa3.94□□□□□ -1.78
HMGB3P31-201ENST00000413333 DCAF4L1Q3SXM0 396 aa3.94□□□□□ -1.78
HMGB3P31-201ENST00000413333 ADAMTSL5Q6ZMM2 481 aa3.94□□□□□ -1.78
HMGB3P31-201ENST00000413333 ZNF841Q6ZN19 808 aa3.94□□□□□ -1.78
HMGB3P31-201ENST00000413333 NFAM1Q8NET5 270 aaPredicted RBP3.94□□□□□ -1.78
HMGB3P31-201ENST00000413333 ART4Q93070 314 aa3.94□□□□□ -1.78
HMGB3P31-201ENST00000413333 TADA1Q96BN2 335 aa3.94□□□□□ -1.78
HMGB3P31-201ENST00000413333 DHTKD1Q96HY7 919 aaPredicted RBP3.94□□□□□ -1.78
HMGB3P31-201ENST00000413333 TSPY26PQ9H489 355 aa3.94□□□□□ -1.78
HMGB3P31-201ENST00000413333 DHX33Q9H6R0 707 aaKnown RBP3.94□□□□□ -1.78
HMGB3P31-201ENST00000413333 ESM1Q9NQ30 184 aa3.94□□□□□ -1.78
HMGB3P31-201ENST00000413333 MBD2Q9UBB5 411 aa3.94□□□□□ -1.78
HMGB3P31-201ENST00000413333 CPQQ9Y646 472 aa3.94□□□□□ -1.78
HMGB3P31-201ENST00000413333 LRRC30A6NM36 301 aa3.93□□□□□ -1.78
HMGB3P31-201ENST00000413333 NTN3O00634 580 aaPredicted RBP3.93□□□□□ -1.78
HMGB3P31-201ENST00000413333 ARHGEF9O43307 516 aa3.93□□□□□ -1.78
HMGB3P31-201ENST00000413333 RIPK2O43353 540 aa3.93□□□□□ -1.78
HMGB3P31-201ENST00000413333 FRAT2O75474 233 aaPredicted RBP3.93□□□□□ -1.78
HMGB3P31-201ENST00000413333 UGT2B4P06133 528 aa3.93□□□□□ -1.78
HMGB3P31-201ENST00000413333 TRIM49P0CI25 452 aa3.93□□□□□ -1.78
HMGB3P31-201ENST00000413333 TRIM49CP0CI26 452 aa3.93□□□□□ -1.78
HMGB3P31-201ENST00000413333 HTR2AP28223 471 aa3.93□□□□□ -1.78
HMGB3P31-201ENST00000413333 SLC1A4P43007 532 aa3.93□□□□□ -1.78
HMGB3P31-201ENST00000413333 PGFP49763 221 aa3.93□□□□□ -1.78
HMGB3P31-201ENST00000413333 HILS1P60008 231 aa3.93□□□□□ -1.78
HMGB3P31-201ENST00000413333 HMGN5P82970 282 aaKnown RBP3.93□□□□□ -1.78
HMGB3P31-201ENST00000413333 CNTN2Q02246 1040 aa3.93□□□□□ -1.78
HMGB3P31-201ENST00000413333 EIF2B1Q14232 305 aaKnown RBP3.93□□□□□ -1.78
HMGB3P31-201ENST00000413333 SIX1Q15475 284 aaPredicted RBP3.93□□□□□ -1.78
HMGB3P31-201ENST00000413333 CD226Q15762 336 aa3.93□□□□□ -1.78
HMGB3P31-201ENST00000413333 CDKN3Q16667 212 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms