RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 GLE1Q53GS7 698 aaKnown RBP-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 C6orf136Q5SQH8 315 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 ERMARDQ5T6L9 678 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 C9orf64Q5T6V5 341 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 GDF5OSQ5U4N7 250 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 FAM160B1Q5W0V3 765 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 SPECC1LQ69YQ0 1117 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 FAM199XQ6PEV8 388 aaPredicted RBP-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 AFTPHQ6ULP2 937 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 C16orf47Q6ZP98 133 aaPredicted RBP-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 HS2ST1Q7LGA3 356 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 TCF23Q7RTU1 214 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 FAM122BQ7Z309 247 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 CACNA2D4Q7Z3S7 1137 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 STRA8Q7Z7C7 330 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 CENPVQ7Z7K6 275 aaPredicted RBP-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 CALHM1Q8IU99 346 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 PCP2Q8IVA1 136 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 WDR63Q8IWG1 891 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 AMN1Q8IY45 258 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 SYTL1Q8IYJ3 562 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 FAM86B1Q8N7N1 296 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 NIPA2Q8N8Q9 360 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 ZBTB44Q8NCP5 570 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 C11orf65Q8NCR3 313 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 TMEM185AQ8NFB2 350 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 OR10G4Q8NGN3 311 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 OR5M8Q8NGP6 311 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 OR4X1Q8NH49 305 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 OR52I2Q8NH67 350 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 PLPPR1Q8TBJ4 325 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 ZCCHC10Q8TBK6 192 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 IFI44Q8TCB0 444 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 SMAP2Q8WU79 429 aaPredicted RBP-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 HTR3CQ8WXA8 447 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 DCUN1D4Q92564 292 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 HPS3Q969F9 1004 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 ZUFSPQ96AP4 578 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 MUCL1Q96DR8 90 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 SLC25A38Q96DW6 304 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 CNRIP1Q96F85 164 aaPredicted RBP-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 TESK2Q96S53 571 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 CPXM1Q96SM3 734 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 MYD88Q99836 296 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 GAL3ST1Q99999 423 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 TMEM121Q9BTD3 319 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 RNF26Q9BY78 433 aaPredicted RBP-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 DSN1Q9H410 356 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 ATP13A3Q9H7F0 1226 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 BRD9Q9H8M2 597 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 HHATLQ9HCP6 504 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 STARD7Q9NQZ5 370 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 ALKBH4Q9NXW9 302 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 ERVK-18Q9QC07 812 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 HESX1Q9UBX0 185 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 CTNNA3Q9UI47 895 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 ZHX1Q9UKY1 873 aaPredicted RBP-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 SARDHQ9UL12 918 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 OGDHLQ9ULD0 1010 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 CA14Q9ULX7 337 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 AGTPBP1Q9UPW5 1226 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 MRPL11Q9Y3B7 192 aaKnown RBP-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 RHBDD3Q9Y3P4 386 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 RABGAP1Q9Y3P9 1069 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 HYOU1Q9Y4L1 999 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 SPEF1Q9Y4P9 236 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 LOXHD1Q8IVV2 1947 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 FRYLO94915 3013 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 OTOFQ9HC10 1997 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 ZNF532Q9HCE3 1301 aa-1.92□□□□□ -2.72
RNU4-88P-201ENST00000411220 ADGRB1O14514 1584 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 PHF3Q92576 2039 aaKnown RBP-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 A0A087WX48 190 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 TRAV1-1A0A0B4J248 108 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 IGHV1OR15-9A0A0B4J2B8 117 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 TMEM120BA0PK00 339 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 ARHGEF33A8MVX0 844 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 MYO1GB0I1T2 1018 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 B4DLN1 442 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 TRAPPC2LH3BP13 241 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 BTN3A3O00478 584 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 BTN3A1O00481 513 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 TM9SF1O15321 606 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 GYG2O15488 501 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 MGRN1O60291 552 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 CACNG3O60359 315 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 EEDO75530 441 aaKnown RBP-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 CRTAPO75718 401 aaPredicted RBP-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 UGT2B17O75795 530 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 MYO1DO94832 1006 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 DUSP14O95147 198 aaKnown RBP-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 IGLV3-25P01717 112 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 IGHV3-23P01764 117 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 LPLP06858 475 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 KLK3P07288 261 aaPredicted RBP-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 CA3P07451 260 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 APRTP07741 180 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 SFTPBP07988 381 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 SPARCP09486 303 aa-1.93□□□□□ -2.72
RNU4-88P-201ENST00000411220 CYP11B1P15538 503 aa-1.93□□□□□ -2.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms