RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 LTB4RQ15722 352 aa13.46□□□□□ -0.25
CBX3-203ENST00000409747 FBXL19-AS1Q494R0 122 aa13.46□□□□□ -0.25
CBX3-203ENST00000409747 TRMT12Q53H54 448 aaKnown RBP13.46□□□□□ -0.25
CBX3-203ENST00000409747 ZNF628Q5EBL2 1059 aa13.46□□□□□ -0.25
CBX3-203ENST00000409747 TCHHL1Q5QJ38 904 aaPredicted RBP13.46□□□□□ -0.25
CBX3-203ENST00000409747 FAM83FQ8NEG4 500 aaPredicted RBP13.46□□□□□ -0.25
CBX3-203ENST00000409747 TNIP2Q8NFZ5 429 aa13.46□□□□□ -0.25
CBX3-203ENST00000409747 KIF18AQ8NI77 898 aa13.46□□□□□ -0.25
CBX3-203ENST00000409747 CCDC126Q96EE4 140 aa13.46□□□□□ -0.25
CBX3-203ENST00000409747 UGT2B28Q9BY64 529 aa13.46□□□□□ -0.25
CBX3-203ENST00000409747 ACPTQ9BZG2 426 aa13.46□□□□□ -0.25
CBX3-203ENST00000409747 EHD3Q9NZN3 535 aa13.46□□□□□ -0.25
CBX3-203ENST00000409747 HEY2Q9UBP5 337 aa13.46□□□□□ -0.25
CBX3-203ENST00000409747 HIVEP1P15822 2718 aa13.46□□□□□ -0.26
CBX3-203ENST00000409747 ICOSLGO75144 302 aa13.45□□□□□ -0.26
CBX3-203ENST00000409747 CBR3O75828 277 aa13.45□□□□□ -0.26
CBX3-203ENST00000409747 BMP7P18075 431 aa13.45□□□□□ -0.26
CBX3-203ENST00000409747 TIA1P31483 386 aaKnown RBP eCLIP13.45□□□□□ -0.269e-11■■■■□ 23.8
CBX3-203ENST00000409747 KRT20P35900 424 aa13.45□□□□□ -0.26
CBX3-203ENST00000409747 NAA20P61599 178 aa13.45□□□□□ -0.26
CBX3-203ENST00000409747 MRPS35P82673 323 aaKnown RBP13.45□□□□□ -0.26
CBX3-203ENST00000409747 DUSP2Q05923 314 aa13.45□□□□□ -0.26
CBX3-203ENST00000409747 EIPR1Q53HC9 387 aa13.45□□□□□ -0.26
CBX3-203ENST00000409747 WIPI1Q5MNZ9 446 aaPredicted RBP13.45□□□□□ -0.26
CBX3-203ENST00000409747 RELL2Q8NC24 303 aaPredicted RBP13.45□□□□□ -0.26
CBX3-203ENST00000409747 NAXEQ8NCW5 288 aa13.45□□□□□ -0.26
CBX3-203ENST00000409747 RNASE6Q93091 150 aaKnown RBP13.45□□□□□ -0.26
CBX3-203ENST00000409747 COL21A1Q96P44 957 aa13.45□□□□□ -0.26
CBX3-203ENST00000409747 BTBD9Q96Q07 612 aa13.45□□□□□ -0.26
CBX3-203ENST00000409747 TRIB1Q96RU8 372 aa13.45□□□□□ -0.26
CBX3-203ENST00000409747 NODALQ96S42 347 aa13.45□□□□□ -0.26
CBX3-203ENST00000409747 CALHM2Q9HA72 323 aa13.45□□□□□ -0.26
CBX3-203ENST00000409747 DNAJB12Q9NXW2 375 aaKnown RBP13.45□□□□□ -0.26
CBX3-203ENST00000409747 SENP1Q9P0U3 644 aa13.45□□□□□ -0.26
CBX3-203ENST00000409747 EDARQ9UNE0 448 aa13.45□□□□□ -0.26
CBX3-203ENST00000409747 EXO1Q9UQ84 846 aaKnown RBP13.45□□□□□ -0.26
CBX3-203ENST00000409747 GPR55Q9Y2T6 319 aaPredicted RBP13.45□□□□□ -0.26
CBX3-203ENST00000409747 FREM3P0C091 2139 aa13.45□□□□□ -0.26
CBX3-203ENST00000409747 MBD3L4A6NDZ8 208 aaPredicted RBP13.44□□□□□ -0.26
CBX3-203ENST00000409747 MBD3L3A6NE82 208 aaPredicted RBP13.44□□□□□ -0.26
CBX3-203ENST00000409747 MBD3L5A6NJ08 208 aaPredicted RBP13.44□□□□□ -0.26
CBX3-203ENST00000409747 H3BQF6 201 aa13.44□□□□□ -0.26
CBX3-203ENST00000409747 UGT2B11O75310 529 aa13.44□□□□□ -0.26
CBX3-203ENST00000409747 EFR3AQ14156 821 aa13.44□□□□□ -0.26
CBX3-203ENST00000409747 FAM180BQ6P0A1 224 aa13.44□□□□□ -0.26
CBX3-203ENST00000409747 GALNT18Q6P9A2 607 aa13.44□□□□□ -0.26
CBX3-203ENST00000409747 SCIMPQ6UWF3 145 aa13.44□□□□□ -0.26
CBX3-203ENST00000409747 ENPP6Q6UWR7 440 aa13.44□□□□□ -0.26
CBX3-203ENST00000409747 ZZZ3Q8IYH5 903 aa13.44□□□□□ -0.26
CBX3-203ENST00000409747 CCDC116Q8IYX3 515 aa13.44□□□□□ -0.26
CBX3-203ENST00000409747 MBD3L2Q8NHZ7 208 aaPredicted RBP13.44□□□□□ -0.26
CBX3-203ENST00000409747 EXOSC8Q96B26 276 aaKnown RBP13.44□□□□□ -0.26
CBX3-203ENST00000409747 WDYHV1Q96HA8 205 aa13.44□□□□□ -0.26
CBX3-203ENST00000409747 SH3GL2Q99962 352 aa13.44□□□□□ -0.26
CBX3-203ENST00000409747 STMN4Q9H169 189 aaPredicted RBP13.44□□□□□ -0.26
CBX3-203ENST00000409747 GALNT9Q9HCQ5 603 aa13.44□□□□□ -0.26
CBX3-203ENST00000409747 DCDC2Q9UHG0 476 aa13.44□□□□□ -0.26
CBX3-203ENST00000409747 MAPRE3Q9UPY8 281 aa13.44□□□□□ -0.26
CBX3-203ENST00000409747 SERTM1A2A2V5 107 aa13.44□□□□□ -0.26
CBX3-203ENST00000409747 CTAG2O75638 210 aa13.44□□□□□ -0.26
CBX3-203ENST00000409747 CYP4B1P13584 511 aa13.44□□□□□ -0.26
CBX3-203ENST00000409747 IL12BP29460 328 aa13.44□□□□□ -0.26
CBX3-203ENST00000409747 MPIP34949 423 aa13.44□□□□□ -0.26
CBX3-203ENST00000409747 OPRM1P35372 400 aa13.44□□□□□ -0.26
CBX3-203ENST00000409747 SOX18P35713 384 aa13.44□□□□□ -0.26
CBX3-203ENST00000409747 PTGDSP41222 190 aa13.44□□□□□ -0.26
CBX3-203ENST00000409747 NAGLUP54802 743 aa13.44□□□□□ -0.26
CBX3-203ENST00000409747 RAE1P78406 368 aaKnown RBP13.44□□□□□ -0.26
CBX3-203ENST00000409747 MRPS22P82650 360 aaKnown RBP13.44□□□□□ -0.26
CBX3-203ENST00000409747 HMGCS1Q01581 520 aa13.44□□□□□ -0.26
CBX3-203ENST00000409747 FLYWCH1Q4VC44 716 aa13.44□□□□□ -0.26
CBX3-203ENST00000409747 YRDCQ86U90 279 aaKnown RBP13.44□□□□□ -0.26
CBX3-203ENST00000409747 IFNEQ86WN2 208 aa13.44□□□□□ -0.26
CBX3-203ENST00000409747 KIF18BQ86Y91 864 aa13.44□□□□□ -0.26
CBX3-203ENST00000409747 FAM9CQ8IZT9 166 aa13.44□□□□□ -0.26
CBX3-203ENST00000409747 SIMC1Q8NDZ2 872 aa13.44□□□□□ -0.26
CBX3-203ENST00000409747 OR9A2Q8NGT5 310 aa13.44□□□□□ -0.26
CBX3-203ENST00000409747 OR14L1PQ8NHC6 308 aa13.44□□□□□ -0.26
CBX3-203ENST00000409747 ZPLD1Q8TCW7 415 aa13.44□□□□□ -0.26
CBX3-203ENST00000409747 C16orf78Q8WTQ4 265 aa13.44□□□□□ -0.26
CBX3-203ENST00000409747 FAM222BQ8WU58 562 aa13.44□□□□□ -0.26
CBX3-203ENST00000409747 NINJ1Q92982 152 aa13.44□□□□□ -0.26
CBX3-203ENST00000409747 TMBIM1Q969X1 311 aa13.44□□□□□ -0.26
CBX3-203ENST00000409747 SLC35A4Q96G79 324 aa13.44□□□□□ -0.26
CBX3-203ENST00000409747 POLDIP3Q9BY77 421 aaKnown RBP13.44□□□□□ -0.26
CBX3-203ENST00000409747 OR2B2Q9GZK3 357 aa13.44□□□□□ -0.26
CBX3-203ENST00000409747 SERHLQ9NQF3 203 aa13.44□□□□□ -0.26
CBX3-203ENST00000409747 SLC35C2Q9NQQ7 365 aa13.44□□□□□ -0.26
CBX3-203ENST00000409747 SIRT5Q9NXA8 310 aa13.44□□□□□ -0.26
CBX3-203ENST00000409747 TAS2R9Q9NYW1 312 aa13.44□□□□□ -0.26
CBX3-203ENST00000409747 ANKHD1Q8IWZ3 2542 aaKnown RBP13.43□□□□□ -0.26
CBX3-203ENST00000409747 GOLGA8RI6L899 631 aa13.43□□□□□ -0.26
CBX3-203ENST00000409747 COQ9O75208 318 aa13.43□□□□□ -0.26
CBX3-203ENST00000409747 GLRA3O75311 464 aa13.43□□□□□ -0.26
CBX3-203ENST00000409747 ERN1O75460 977 aaKnown RBP13.43□□□□□ -0.26
CBX3-203ENST00000409747 REM1O75628 298 aa13.43□□□□□ -0.26
CBX3-203ENST00000409747 SLITRK5O94991 958 aa13.43□□□□□ -0.26
CBX3-203ENST00000409747 IL18BPO95998 194 aa13.43□□□□□ -0.26
CBX3-203ENST00000409747 PYGBP11216 843 aa13.43□□□□□ -0.26
CBX3-203ENST00000409747 CPN1P15169 458 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms