RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 TPTEP56180 551 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 FAM72AQ5TYM5 149 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 FAM72DQ6L9T8 149 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 FAM72BQ86X60 149 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 DCP2Q8IU60 420 aaKnown RBP8□□□□□ -1.13
SCN9A-203ENST00000409672 DCAF4L2Q8NA75 395 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 ACOT12Q8WYK0 555 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 GTF2H4Q92759 462 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 SPTSSAQ969W0 71 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 TMEM165Q9HC07 324 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 MEIS3P2A8K0S8 358 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 SGCEO43556 437 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 CREG1O75629 220 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 IFNA17P01571 189 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 SERPINA7P05543 415 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 PORP16435 677 aaPredicted RBP8□□□□□ -1.13
SCN9A-203ENST00000409672 CKMT2P17540 419 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 ZNF616Q08AN1 781 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 TMEM71Q6P5X7 295 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 CEACAM19Q7Z692 300 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 OR52N2Q8NGI0 321 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 IFNA5P01569 189 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 TSFMP43897 325 aaKnown RBP8□□□□□ -1.13
SCN9A-203ENST00000409672 ROR2Q01974 943 aaKnown RBP8□□□□□ -1.13
SCN9A-203ENST00000409672 GRM7Q14831 915 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 ADGRD1Q6QNK2 874 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 TMEM151AQ8N4L1 468 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 GLB1L3Q8NCI6 653 aaPredicted RBP8□□□□□ -1.13
SCN9A-203ENST00000409672 OR9A2Q8NGT5 310 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 C10orf82Q8WW14 230 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 RSC1A1Q92681 617 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 TSGA13Q96PP4 275 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 CAMTA1Q9Y6Y1 1673 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 CD6P30203 668 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 RPS5P46782 204 aaKnown RBP8□□□□□ -1.13
SCN9A-203ENST00000409672 PLA2G7Q13093 441 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 KCNAB2Q13303 367 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 HSF5Q4G112 596 aaPredicted RBP8□□□□□ -1.13
SCN9A-203ENST00000409672 C6orf120Q7Z4R8 191 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 KBTBD6Q86V97 674 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 MTMR14Q8NCE2 650 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 TMEM80Q96HE8 168 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 TM7SF3Q9NS93 570 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 KRBA1A5PL33 1030 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 UNC119BA6NIH7 251 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 ZNF44P15621 663 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 MEP1AQ16819 746 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 LIN52Q52LA3 116 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 ATPAF1Q5TC12 328 aaPredicted RBP8□□□□□ -1.13
SCN9A-203ENST00000409672 MOB3CQ70IA8 216 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 KLBQ86Z14 1044 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 FGF13Q92913 245 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 SECISBP2Q96T21 854 aaKnown RBP8□□□□□ -1.13
SCN9A-203ENST00000409672 APOOQ9BUR5 198 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 XPNPEP1Q9NQW7 623 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 TP53TG5Q9Y2B4 290 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 ARHGEF28Q8N1W1 1705 aaKnown RBP8□□□□□ -1.13
SCN9A-203ENST00000409672 IGLV3-22A0A075B6J6 115 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 STC2O76061 302 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 SERINC3Q13530 473 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 EIF2B1Q14232 305 aaKnown RBP8□□□□□ -1.13
SCN9A-203ENST00000409672 MFSD5Q6N075 450 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 KIAA0907Q7Z7F0 614 aaPredicted RBP8□□□□□ -1.13
SCN9A-203ENST00000409672 ARHGAP12Q8IWW6 846 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 PLEKHJ1Q9NW61 149 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 ZNF223Q9UK11 482 aaPredicted RBP8□□□□□ -1.13
SCN9A-203ENST00000409672 PARP4Q9UKK3 1724 aaKnown RBP8□□□□□ -1.13
SCN9A-203ENST00000409672 ANKRD26Q9UPS8 1709 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 GPIP06744 558 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 MTHFD2P13995 350 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 CELP19835 753 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 BMXP51813 675 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 BATFQ16520 125 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 SFRP5Q5T4F7 317 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 TMEM53Q6P2H8 277 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 FAM217AQ8IXS0 508 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 SAMD12Q8N8I0 201 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 PNPLA1Q8N8W4 532 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 OR5D16Q8NGK9 328 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 HUS1BQ8NHY5 278 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 TMEM248Q9NWD8 314 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 CMAHPQ9Y471 501 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 LSM5Q9Y4Y9 91 aaKnown RBP8□□□□□ -1.13
SCN9A-203ENST00000409672 NUMBLQ9Y6R0 609 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 BTNL10A8MVZ5 291 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 SYT7O43581 403 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 UQCRC2P22695 453 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 GMPRP36959 345 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 SEC61A1P61619 476 aaKnown RBP8□□□□□ -1.13
SCN9A-203ENST00000409672 HSD17B12Q53GQ0 312 aa8□□□□□ -1.13
SCN9A-203ENST00000409672 HMX3A6NHT5 357 aa7.99□□□□□ -1.13
SCN9A-203ENST00000409672 KDM4EB2RXH2 506 aaPredicted RBP7.99□□□□□ -1.13
SCN9A-203ENST00000409672 LUMP51884 338 aaPredicted RBP7.99□□□□□ -1.13
SCN9A-203ENST00000409672 OR2T5Q6IEZ7 315 aa7.99□□□□□ -1.13
SCN9A-203ENST00000409672 GRHL2Q6ISB3 625 aa7.99□□□□□ -1.13
SCN9A-203ENST00000409672 ASCC1Q8N9N2 400 aaKnown RBP7.99□□□□□ -1.13
SCN9A-203ENST00000409672 OR2T29Q8NH02 315 aa7.99□□□□□ -1.13
SCN9A-203ENST00000409672 BOCQ9BWV1 1114 aa7.99□□□□□ -1.13
SCN9A-203ENST00000409672 DNAJB9Q9UBS3 223 aa7.99□□□□□ -1.13
SCN9A-203ENST00000409672 ELK4P28324 431 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms