RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 ARFRP1Q13795 201 aa13.47□□□□□ -0.25
PCDHGA11-201ENST00000398587 SELPLGQ14242 412 aa13.47□□□□□ -0.25
PCDHGA11-201ENST00000398587 NFATC4Q14934 902 aa13.47□□□□□ -0.25
PCDHGA11-201ENST00000398587 OR6C4Q8NGE1 309 aa13.47□□□□□ -0.25
PCDHGA11-201ENST00000398587 TANKQ92844 425 aa13.47□□□□□ -0.25
PCDHGA11-201ENST00000398587 MR1Q95460 341 aa13.47□□□□□ -0.25
PCDHGA11-201ENST00000398587 FAM46AQ96IP4 442 aaKnown RBP13.47□□□□□ -0.25
PCDHGA11-201ENST00000398587 DMRTB1Q96MA1 342 aa13.47□□□□□ -0.25
PCDHGA11-201ENST00000398587 ZNF583Q96ND8 569 aa13.47□□□□□ -0.25
PCDHGA11-201ENST00000398587 HHATLQ9HCP6 504 aa13.47□□□□□ -0.25
PCDHGA11-201ENST00000398587 TIGARQ9NQ88 270 aa13.47□□□□□ -0.25
PCDHGA11-201ENST00000398587 CUEDC1Q9NWM3 386 aaPredicted RBP13.47□□□□□ -0.25
PCDHGA11-201ENST00000398587 IL37Q9NZH6 218 aa13.47□□□□□ -0.25
PCDHGA11-201ENST00000398587 ADAM29Q9UKF5 820 aa13.47□□□□□ -0.25
PCDHGA11-201ENST00000398587 RBMX2Q9Y388 322 aaKnown RBP13.47□□□□□ -0.25
PCDHGA11-201ENST00000398587 PMF1-BGLAPU3KQ54 211 aa13.47□□□□□ -0.25
PCDHGA11-201ENST00000398587 F3P13726 295 aa13.47□□□□□ -0.25
PCDHGA11-201ENST00000398587 RNF144AP50876 292 aaPredicted RBP13.47□□□□□ -0.25
PCDHGA11-201ENST00000398587 SLC5A12Q1EHB4 618 aa13.47□□□□□ -0.25
PCDHGA11-201ENST00000398587 ZNF227Q86WZ6 799 aa13.47□□□□□ -0.25
PCDHGA11-201ENST00000398587 FUNDC1Q8IVP5 155 aa13.47□□□□□ -0.25
PCDHGA11-201ENST00000398587 PAPD5Q8NDF8 572 aaKnown RBP13.47□□□□□ -0.25
PCDHGA11-201ENST00000398587 TOR1AIP2Q8NFQ8 470 aa13.47□□□□□ -0.25
PCDHGA11-201ENST00000398587 LHPPQ9H008 270 aa13.47□□□□□ -0.25
PCDHGA11-201ENST00000398587 MAP1BP46821 2468 aaKnown RBP13.47□□□□□ -0.25
PCDHGA11-201ENST00000398587 C11orf98E9PRG8 122 aa13.46□□□□□ -0.25
PCDHGA11-201ENST00000398587 KIAA0355O15063 1070 aa13.46□□□□□ -0.25
PCDHGA11-201ENST00000398587 SLCO2B1O94956 709 aa13.46□□□□□ -0.25
PCDHGA11-201ENST00000398587 PDSS1Q5T2R2 415 aa13.46□□□□□ -0.25
PCDHGA11-201ENST00000398587 CHERPQ8IWX8 916 aaKnown RBP13.46□□□□□ -0.25
PCDHGA11-201ENST00000398587 INSM2Q96T92 566 aaPredicted RBP13.46□□□□□ -0.25
PCDHGA11-201ENST00000398587 ORAI3Q9BRQ5 295 aa13.46□□□□□ -0.25
PCDHGA11-201ENST00000398587 SPATA6Q9NWH7 488 aaPredicted RBP13.46□□□□□ -0.25
PCDHGA11-201ENST00000398587 TBX21Q9UL17 535 aa13.46□□□□□ -0.25
PCDHGA11-201ENST00000398587 GRIP1Q9Y3R0 1128 aa13.46□□□□□ -0.25
PCDHGA11-201ENST00000398587 MYO10Q9HD67 2058 aa13.46□□□□□ -0.25
PCDHGA11-201ENST00000398587 ADORA3P0DMS8 318 aa13.46□□□□□ -0.25
PCDHGA11-201ENST00000398587 PSMB5P28074 263 aa13.46□□□□□ -0.25
PCDHGA11-201ENST00000398587 SEC23BQ15437 767 aa13.46□□□□□ -0.25
PCDHGA11-201ENST00000398587 NSDHLQ15738 373 aa13.46□□□□□ -0.25
PCDHGA11-201ENST00000398587 SNX29P2Q8IUI4 249 aa13.46□□□□□ -0.25
PCDHGA11-201ENST00000398587 ZNF101Q8IZC7 436 aa13.46□□□□□ -0.25
PCDHGA11-201ENST00000398587 VN1R2Q8NFZ6 395 aa13.46□□□□□ -0.25
PCDHGA11-201ENST00000398587 OR8H1Q8NGG4 311 aa13.46□□□□□ -0.25
PCDHGA11-201ENST00000398587 OR5L2Q8NGL0 311 aa13.46□□□□□ -0.25
PCDHGA11-201ENST00000398587 OLIG1Q8TAK6 271 aa13.46□□□□□ -0.25
PCDHGA11-201ENST00000398587 THAP4Q8WY91 577 aa13.46□□□□□ -0.25
PCDHGA11-201ENST00000398587 S100A16Q96FQ6 103 aaKnown RBP13.46□□□□□ -0.25
PCDHGA11-201ENST00000398587 RARRES3Q9UL19 164 aa13.46□□□□□ -0.25
PCDHGA11-201ENST00000398587 PCDHGB2Q9Y5G2 931 aa13.46□□□□□ -0.25
PCDHGA11-201ENST00000398587 COL5A3P25940 1745 aaPredicted RBP13.46□□□□□ -0.25
PCDHGA11-201ENST00000398587 LHCGRP22888 699 aa13.46□□□□□ -0.25
PCDHGA11-201ENST00000398587 NAA10P41227 235 aaPredicted RBP13.46□□□□□ -0.25
PCDHGA11-201ENST00000398587 SPATC1Q76KD6 591 aa13.46□□□□□ -0.25
PCDHGA11-201ENST00000398587 TTTY10Q9BZA0 68 aa13.46□□□□□ -0.25
PCDHGA11-201ENST00000398587 ENAMQ9NRM1 1142 aa13.46□□□□□ -0.25
PCDHGA11-201ENST00000398587 OBP2AQ9NY56 170 aa13.46□□□□□ -0.25
PCDHGA11-201ENST00000398587 MBD2Q9UBB5 411 aa13.46□□□□□ -0.25
PCDHGA11-201ENST00000398587 ZNF701M0R085 212 aaPredicted RBP13.46□□□□□ -0.26
PCDHGA11-201ENST00000398587 TNFRSF4P43489 277 aa13.46□□□□□ -0.26
PCDHGA11-201ENST00000398587 ADAMTSL4Q6UY14 1074 aa13.46□□□□□ -0.26
PCDHGA11-201ENST00000398587 GALNTL5Q7Z4T8 443 aa13.46□□□□□ -0.26
PCDHGA11-201ENST00000398587 VWA5B2Q8N398 1253 aa13.46□□□□□ -0.26
PCDHGA11-201ENST00000398587 CCDC107Q8WV48 283 aa13.46□□□□□ -0.26
PCDHGA11-201ENST00000398587 TOE1Q96GM8 510 aaKnown RBP13.46□□□□□ -0.26
PCDHGA11-201ENST00000398587 TTYH2Q9BSA4 534 aa13.46□□□□□ -0.26
PCDHGA11-201ENST00000398587 WACQ9BTA9 647 aa13.46□□□□□ -0.26
PCDHGA11-201ENST00000398587 STUB1Q9UNE7 303 aa13.46□□□□□ -0.26
PCDHGA11-201ENST00000398587 PCDHGA8Q9Y5G5 932 aa13.46□□□□□ -0.26
PCDHGA11-201ENST00000398587 PCDHGA10Q9Y5H3 936 aa13.46□□□□□ -0.26
PCDHGA11-201ENST00000398587 SSC5DA1L4H1 1573 aa13.45□□□□□ -0.26
PCDHGA11-201ENST00000398587 ISPDA4D126 451 aa13.45□□□□□ -0.26
PCDHGA11-201ENST00000398587 GFRA2O00451 464 aa13.45□□□□□ -0.26
PCDHGA11-201ENST00000398587 ARAFP10398 606 aa13.45□□□□□ -0.26
PCDHGA11-201ENST00000398587 GGT2P36268 569 aa13.45□□□□□ -0.26
PCDHGA11-201ENST00000398587 RPE65Q16518 533 aa13.45□□□□□ -0.26
PCDHGA11-201ENST00000398587 KLHL26Q53HC5 615 aa13.45□□□□□ -0.26
PCDHGA11-201ENST00000398587 OR5D16Q8NGK9 328 aa13.45□□□□□ -0.26
PCDHGA11-201ENST00000398587 OR2L8Q8NGY9 312 aa13.45□□□□□ -0.26
PCDHGA11-201ENST00000398587 CREB3L4Q8TEY5 395 aa13.45□□□□□ -0.26
PCDHGA11-201ENST00000398587 TMIGD2Q96BF3 282 aa13.45□□□□□ -0.26
PCDHGA11-201ENST00000398587 LYSMD1Q96S90 227 aa13.45□□□□□ -0.26
PCDHGA11-201ENST00000398587 MACROD1Q9BQ69 325 aa13.45□□□□□ -0.26
PCDHGA11-201ENST00000398587 HDAC8Q9BY41 377 aa13.45□□□□□ -0.26
PCDHGA11-201ENST00000398587 ALOXE3Q9BYJ1 711 aa13.45□□□□□ -0.26
PCDHGA11-201ENST00000398587 B3GAT2Q9NPZ5 323 aa13.45□□□□□ -0.26
PCDHGA11-201ENST00000398587 MAGED1Q9Y5V3 778 aaPredicted RBP13.45□□□□□ -0.26
PCDHGA11-201ENST00000398587 COL4A1P02462 1669 aa13.45□□□□□ -0.26
PCDHGA11-201ENST00000398587 SLC35F4A4IF30 521 aa13.45□□□□□ -0.26
PCDHGA11-201ENST00000398587 HOXC11O43248 304 aaPredicted RBP13.45□□□□□ -0.26
PCDHGA11-201ENST00000398587 LAMTOR5O43504 91 aa13.45□□□□□ -0.26
PCDHGA11-201ENST00000398587 SLC19A2O60779 497 aa13.45□□□□□ -0.26
PCDHGA11-201ENST00000398587 GADD45AP24522 165 aa13.45□□□□□ -0.26
PCDHGA11-201ENST00000398587 DNASE1L3Q13609 305 aa13.45□□□□□ -0.26
PCDHGA11-201ENST00000398587 ELOAQ14241 798 aaKnown RBP13.45□□□□□ -0.26
PCDHGA11-201ENST00000398587 MAD2L1BPQ15013 274 aaPredicted RBP13.45□□□□□ -0.26
PCDHGA11-201ENST00000398587 C22orf42Q6IC83 251 aa13.45□□□□□ -0.26
PCDHGA11-201ENST00000398587 SFXN5Q8TD22 340 aa13.45□□□□□ -0.26
PCDHGA11-201ENST00000398587 TBCCD1Q9NVR7 557 aa13.45□□□□□ -0.26
PCDHGA11-201ENST00000398587 THAP10Q9P2Z0 257 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms