RNA–Protein interactions for RNA: ENST00000398529.7

RAB1A-201, Transcript of RAB1A, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB1A, Length 1,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1A-201ENST00000398529 MS4A12Q9NXJ0 267 aa13.12□□□□□ -0.31
RAB1A-201ENST00000398529 TSC22D4Q9Y3Q8 395 aa13.12□□□□□ -0.31
RAB1A-201ENST00000398529 PCDHGA11Q9Y5H2 935 aa13.12□□□□□ -0.31
RAB1A-201ENST00000398529 TMEM114B3SHH9 223 aa13.11□□□□□ -0.31
RAB1A-201ENST00000398529 OR10H2O60403 315 aa13.11□□□□□ -0.31
RAB1A-201ENST00000398529 LYPLA1O75608 230 aaPredicted RBP13.11□□□□□ -0.31
RAB1A-201ENST00000398529 SNX4O95219 450 aa13.11□□□□□ -0.31
RAB1A-201ENST00000398529 ENO1P06733 434 aaKnown RBP13.11□□□□□ -0.31
RAB1A-201ENST00000398529 CHRNGP07510 517 aa13.11□□□□□ -0.31
RAB1A-201ENST00000398529 PCNAP12004 261 aa13.11□□□□□ -0.31
RAB1A-201ENST00000398529 HIST1H1TP22492 207 aaPredicted RBP13.11□□□□□ -0.31
RAB1A-201ENST00000398529 ATP5A1P25705 553 aaKnown RBP13.11□□□□□ -0.31
RAB1A-201ENST00000398529 ARRB2P32121 409 aa13.11□□□□□ -0.31
RAB1A-201ENST00000398529 SSR2P43308 183 aa13.11□□□□□ -0.31
RAB1A-201ENST00000398529 CPA2P48052 419 aa13.11□□□□□ -0.31
RAB1A-201ENST00000398529 ABCE1P61221 599 aaKnown RBP13.11□□□□□ -0.31
RAB1A-201ENST00000398529 GALNT1Q10472 559 aaPredicted RBP13.11□□□□□ -0.31
RAB1A-201ENST00000398529 ARL13AQ5H913 290 aaPredicted RBP13.11□□□□□ -0.31
RAB1A-201ENST00000398529 HLA-DQA1Q5Y7H0 255 aa13.11□□□□□ -0.31
RAB1A-201ENST00000398529 NSUN5P2Q63ZY6 315 aa13.11□□□□□ -0.31
RAB1A-201ENST00000398529 ADNP2Q6IQ32 1131 aa13.11□□□□□ -0.31
RAB1A-201ENST00000398529 RNF111Q6ZNA4 994 aa13.11□□□□□ -0.31
RAB1A-201ENST00000398529 VN1R5Q7Z5H4 357 aa13.11□□□□□ -0.31
RAB1A-201ENST00000398529 ARFGAP2Q8N6H7 521 aa13.11□□□□□ -0.31
RAB1A-201ENST00000398529 CDYL2Q8N8U2 506 aa13.11□□□□□ -0.31
RAB1A-201ENST00000398529 OR7G3Q8NG95 312 aa13.11□□□□□ -0.31
RAB1A-201ENST00000398529 RAB3IL1Q8TBN0 382 aa13.11□□□□□ -0.31
RAB1A-201ENST00000398529 TANKQ92844 425 aa13.11□□□□□ -0.31
RAB1A-201ENST00000398529 REPS1Q96D71 796 aa13.11□□□□□ -0.31
RAB1A-201ENST00000398529 FBXL20Q96IG2 436 aa13.11□□□□□ -0.31
RAB1A-201ENST00000398529 DACH2Q96NX9 599 aa13.11□□□□□ -0.31
RAB1A-201ENST00000398529 RPF2Q9H7B2 306 aaKnown RBP13.11□□□□□ -0.31
RAB1A-201ENST00000398529 EML4Q9HC35 981 aaKnown RBP13.11□□□□□ -0.31
RAB1A-201ENST00000398529 SH2D2AQ9NP31 389 aa13.11□□□□□ -0.31
RAB1A-201ENST00000398529 NDRG3Q9UGV2 375 aa13.11□□□□□ -0.31
RAB1A-201ENST00000398529 ANKRD33BA6NCL7 494 aa13.1□□□□□ -0.31
RAB1A-201ENST00000398529 LRRC3CA6NJW4 275 aa13.1□□□□□ -0.31
RAB1A-201ENST00000398529 CD8B2A6NJW9 211 aa13.1□□□□□ -0.31
RAB1A-201ENST00000398529 OR6C76A6NM76 312 aa13.1□□□□□ -0.31
RAB1A-201ENST00000398529 ITM2AO43736 263 aa13.1□□□□□ -0.31
RAB1A-201ENST00000398529 SMPD2O60906 423 aa13.1□□□□□ -0.31
RAB1A-201ENST00000398529 HSPA4LO95757 839 aa13.1□□□□□ -0.31
RAB1A-201ENST00000398529 IL18BPO95998 194 aa13.1□□□□□ -0.31
RAB1A-201ENST00000398529 FBXO45P0C2W1 286 aa13.1□□□□□ -0.31
RAB1A-201ENST00000398529 HMOX2P30519 316 aa13.1□□□□□ -0.31
RAB1A-201ENST00000398529 SERPINB1P30740 379 aa13.1□□□□□ -0.31
RAB1A-201ENST00000398529 SLC1A6P48664 564 aa13.1□□□□□ -0.31
RAB1A-201ENST00000398529 TMED10P49755 219 aaKnown RBP13.1□□□□□ -0.31
RAB1A-201ENST00000398529 ZNF136P52737 540 aa13.1□□□□□ -0.31
RAB1A-201ENST00000398529 WNT3P56703 355 aa13.1□□□□□ -0.31
RAB1A-201ENST00000398529 PPP2R2BQ00005 443 aa13.1□□□□□ -0.31
RAB1A-201ENST00000398529 CRYZQ08257 329 aaKnown RBP13.1□□□□□ -0.31
RAB1A-201ENST00000398529 BST1Q10588 318 aa13.1□□□□□ -0.31
RAB1A-201ENST00000398529 FAM219BQ5XKK7 198 aa13.1□□□□□ -0.31
RAB1A-201ENST00000398529 TTC19Q6DKK2 380 aaPredicted RBP13.1□□□□□ -0.31
RAB1A-201ENST00000398529 SCIMPQ6UWF3 145 aa13.1□□□□□ -0.31
RAB1A-201ENST00000398529 OR4N5Q8IXE1 308 aa13.1□□□□□ -0.31
RAB1A-201ENST00000398529 C9orf40Q8IXQ3 194 aa13.1□□□□□ -0.31
RAB1A-201ENST00000398529 WDR20Q8TBZ3 569 aa13.1□□□□□ -0.31
RAB1A-201ENST00000398529 METTL6Q8TCB7 284 aa13.1□□□□□ -0.31
RAB1A-201ENST00000398529 ZNF473Q8WTR7 871 aaKnown RBP13.1□□□□□ -0.31
RAB1A-201ENST00000398529 DYDC1Q8WWB3 177 aa13.1□□□□□ -0.31
RAB1A-201ENST00000398529 PIGTQ969N2 578 aa13.1□□□□□ -0.31
RAB1A-201ENST00000398529 ANKRD9Q96BM1 317 aaPredicted RBP13.1□□□□□ -0.31
RAB1A-201ENST00000398529 PPWD1Q96BP3 646 aaKnown RBP13.1□□□□□ -0.31
RAB1A-201ENST00000398529 KCNA7Q96RP8 456 aa13.1□□□□□ -0.31
RAB1A-201ENST00000398529 BDH2Q9BUT1 245 aa13.1□□□□□ -0.31
RAB1A-201ENST00000398529 RBM24Q9BX46 236 aaKnown RBP13.1□□□□□ -0.31
RAB1A-201ENST00000398529 PRDM14Q9GZV8 571 aa13.1□□□□□ -0.31
RAB1A-201ENST00000398529 MANSC1Q9H8J5 431 aa13.1□□□□□ -0.31
RAB1A-201ENST00000398529 CALHM2Q9HA72 323 aa13.1□□□□□ -0.31
RAB1A-201ENST00000398529 TNFRSF12AQ9NP84 129 aa13.1□□□□□ -0.31
RAB1A-201ENST00000398529 ADGRE2Q9UHX3 823 aa13.1□□□□□ -0.31
RAB1A-201ENST00000398529 PHF11Q9UIL8 331 aa13.1□□□□□ -0.31
RAB1A-201ENST00000398529 SNX6Q9UNH7 406 aa13.1□□□□□ -0.31
RAB1A-201ENST00000398529 CHCHD2Q9Y6H1 151 aaPredicted RBP13.1□□□□□ -0.31
RAB1A-201ENST00000398529 VPS13CQ709C8 3753 aa13.09□□□□□ -0.31
RAB1A-201ENST00000398529 DOCK7Q96N67 2140 aa13.09□□□□□ -0.31
RAB1A-201ENST00000398529 MANBAO00462 879 aa13.09□□□□□ -0.31
RAB1A-201ENST00000398529 FGF17O60258 216 aa13.09□□□□□ -0.31
RAB1A-201ENST00000398529 CRCPO75575 148 aa13.09□□□□□ -0.31
RAB1A-201ENST00000398529 LRATO95237 230 aa13.09□□□□□ -0.31
RAB1A-201ENST00000398529 LY6G6DO95868 133 aa13.09□□□□□ -0.31
RAB1A-201ENST00000398529 IGKV3-11P04433 115 aa13.09□□□□□ -0.31
RAB1A-201ENST00000398529 TMIGD3P0DMS9 266 aaPredicted RBP13.09□□□□□ -0.31
RAB1A-201ENST00000398529 CYP4B1P13584 511 aa13.09□□□□□ -0.31
RAB1A-201ENST00000398529 ALOX15P16050 662 aaPredicted RBP13.09□□□□□ -0.31
RAB1A-201ENST00000398529 CD53P19397 219 aa13.09□□□□□ -0.31
RAB1A-201ENST00000398529 BUD31P41223 144 aaPredicted RBP13.09□□□□□ -0.31
RAB1A-201ENST00000398529 PIK3CBP42338 1070 aa13.09□□□□□ -0.31
RAB1A-201ENST00000398529 NEK2P51955 445 aa13.09□□□□□ -0.31
RAB1A-201ENST00000398529 RAP1GDS1P52306 607 aa13.09□□□□□ -0.31
RAB1A-201ENST00000398529 AGFG1P52594 562 aaKnown RBP13.09□□□□□ -0.31
RAB1A-201ENST00000398529 FOXA1P55317 472 aa13.09□□□□□ -0.31
RAB1A-201ENST00000398529 NRG3P56975 720 aa13.09□□□□□ -0.31
RAB1A-201ENST00000398529 EEF1A1P68104 462 aaKnown RBP13.09□□□□□ -0.31
RAB1A-201ENST00000398529 PHEXP78562 749 aa13.09□□□□□ -0.31
RAB1A-201ENST00000398529 IFT88Q13099 833 aa13.09□□□□□ -0.31
RAB1A-201ENST00000398529 SLAMF1Q13291 335 aa13.09□□□□□ -0.31
RAB1A-201ENST00000398529 DDX39BQ13838 428 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms