RNA–Protein interactions for RNA: ENST00000398488.5

MBD1-207, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-207ENST00000398488 BICRALQ6AI39 1079 aa14.52□□□□□ -0.08
MBD1-207ENST00000398488 RPUSD3Q6P087 351 aaKnown RBP14.52□□□□□ -0.08
MBD1-207ENST00000398488 FUNDC1Q8IVP5 155 aa14.52□□□□□ -0.08
MBD1-207ENST00000398488 SULF2Q8IWU5 870 aa14.52□□□□□ -0.08
MBD1-207ENST00000398488 SLC15A4Q8N697 577 aa14.52□□□□□ -0.08
MBD1-207ENST00000398488 C17orf47Q8NEP4 570 aa14.52□□□□□ -0.08
MBD1-207ENST00000398488 NUP43Q8NFH3 380 aa14.52□□□□□ -0.08
MBD1-207ENST00000398488 FBXO30Q8TB52 745 aa14.52□□□□□ -0.08
MBD1-207ENST00000398488 SLC22A8Q8TCC7 542 aa14.52□□□□□ -0.08
MBD1-207ENST00000398488 CPT1CQ8TCG5 803 aa14.52□□□□□ -0.08
MBD1-207ENST00000398488 GRHL3Q8TE85 626 aa14.52□□□□□ -0.08
MBD1-207ENST00000398488 SPACA9Q96E40 222 aaPredicted RBP14.52□□□□□ -0.08
MBD1-207ENST00000398488 BARD1Q99728 777 aaKnown RBP14.52□□□□□ -0.08
MBD1-207ENST00000398488 YIPF4Q9BSR8 244 aa14.52□□□□□ -0.08
MBD1-207ENST00000398488 ATAD3AQ9NVI7 634 aa14.52□□□□□ -0.08
MBD1-207ENST00000398488 TAS2R9Q9NYW1 312 aa14.52□□□□□ -0.08
MBD1-207ENST00000398488 COPG1Q9Y678 874 aaKnown RBP14.52□□□□□ -0.08
MBD1-207ENST00000398488 GXYLT2A0PJZ3 443 aa14.51□□□□□ -0.09
MBD1-207ENST00000398488 FRG2CA6NGY1 282 aa14.51□□□□□ -0.09
MBD1-207ENST00000398488 TO15178 435 aa14.51□□□□□ -0.09
MBD1-207ENST00000398488 EMC8O43402 210 aa14.51□□□□□ -0.09
MBD1-207ENST00000398488 SLC22A3O75751 556 aa14.51□□□□□ -0.09
MBD1-207ENST00000398488 SLITRK5O94991 958 aa14.51□□□□□ -0.09
MBD1-207ENST00000398488 VIMP08670 466 aaKnown RBP14.51□□□□□ -0.09
MBD1-207ENST00000398488 IFI6P09912 130 aa14.51□□□□□ -0.09
MBD1-207ENST00000398488 ACP2P11117 423 aa14.51□□□□□ -0.09
MBD1-207ENST00000398488 MST1P26927 711 aa14.51□□□□□ -0.09
MBD1-207ENST00000398488 PIGAP37287 484 aa14.51□□□□□ -0.09
MBD1-207ENST00000398488 RFC3P40938 356 aa14.51□□□□□ -0.09
MBD1-207ENST00000398488 KIR3DL1P43629 444 aa14.51□□□□□ -0.09
MBD1-207ENST00000398488 ZNF155Q12901 538 aaPredicted RBP14.51□□□□□ -0.09
MBD1-207ENST00000398488 GAB1Q13480 694 aa14.51□□□□□ -0.09
MBD1-207ENST00000398488 NTRK2Q16620 822 aa14.51□□□□□ -0.09
MBD1-207ENST00000398488 GSTA3Q16772 222 aa14.51□□□□□ -0.09
MBD1-207ENST00000398488 EXOSC6Q5RKV6 272 aaKnown RBP14.51□□□□□ -0.09
MBD1-207ENST00000398488 RTL4Q6ZR62 310 aa14.51□□□□□ -0.09
MBD1-207ENST00000398488 ZNF605Q86T29 641 aa14.51□□□□□ -0.09
MBD1-207ENST00000398488 SLC44A2Q8IWA5 706 aaPredicted RBP14.51□□□□□ -0.09
MBD1-207ENST00000398488 CPSF7Q8N684 471 aaKnown RBP14.51□□□□□ -0.09
MBD1-207ENST00000398488 PSD4Q8NDX1 1056 aa14.51□□□□□ -0.09
MBD1-207ENST00000398488 OR5AK3PQ8NH89 298 aa14.51□□□□□ -0.09
MBD1-207ENST00000398488 HOXB13Q92826 284 aaPredicted RBP14.51□□□□□ -0.09
MBD1-207ENST00000398488 TMBIM1Q969X1 311 aa14.51□□□□□ -0.09
MBD1-207ENST00000398488 OMA1Q96E52 524 aa14.51□□□□□ -0.09
MBD1-207ENST00000398488 C5orf34Q96MH7 638 aa14.51□□□□□ -0.09
MBD1-207ENST00000398488 INPP5KQ9BT40 448 aa14.51□□□□□ -0.09
MBD1-207ENST00000398488 CFL2Q9Y281 166 aa14.51□□□□□ -0.09
MBD1-207ENST00000398488 PCDHGB6Q9Y5F9 930 aa14.51□□□□□ -0.09
MBD1-207ENST00000398488 SNX8Q9Y5X2 465 aa14.51□□□□□ -0.09
MBD1-207ENST00000398488 CHCHD2Q9Y6H1 151 aaPredicted RBP14.51□□□□□ -0.09
MBD1-207ENST00000398488 EXPH5Q8NEV8 1989 aa14.51□□□□□ -0.09
MBD1-207ENST00000398488 A0A0G2JND7 137 aa14.51□□□□□ -0.09
MBD1-207ENST00000398488 RNASET2O00584 256 aaKnown RBP14.51□□□□□ -0.09
MBD1-207ENST00000398488 CDK2AP1O14519 115 aa14.51□□□□□ -0.09
MBD1-207ENST00000398488 PEX1O43933 1283 aa14.51□□□□□ -0.09
MBD1-207ENST00000398488 COQ9O75208 318 aa14.51□□□□□ -0.09
MBD1-207ENST00000398488 UGT2B11O75310 529 aa14.51□□□□□ -0.09
MBD1-207ENST00000398488 CPSF4O95639 269 aaKnown RBP14.51□□□□□ -0.09
MBD1-207ENST00000398488 PLA2G2AP14555 144 aa14.51□□□□□ -0.09
MBD1-207ENST00000398488 S100A3P33764 101 aa14.51□□□□□ -0.09
MBD1-207ENST00000398488 CDKN2CP42773 168 aa14.51□□□□□ -0.09
MBD1-207ENST00000398488 CLNS1AP54105 237 aaKnown RBP14.51□□□□□ -0.09
MBD1-207ENST00000398488 RPS6KA2Q15349 733 aa14.51□□□□□ -0.09
MBD1-207ENST00000398488 ZNF324BQ6AW86 544 aaPredicted RBP14.51□□□□□ -0.09
MBD1-207ENST00000398488 MFSD12Q6NUT3 480 aa14.51□□□□□ -0.09
MBD1-207ENST00000398488 SZRD1Q7Z422 152 aa14.51□□□□□ -0.09
MBD1-207ENST00000398488 GPALPP1Q8IXQ4 340 aa14.51□□□□□ -0.09
MBD1-207ENST00000398488 TAGAPQ8N103 731 aa14.51□□□□□ -0.09
MBD1-207ENST00000398488 PIK3R3Q92569 461 aa14.51□□□□□ -0.09
MBD1-207ENST00000398488 HGDQ93099 445 aa14.51□□□□□ -0.09
MBD1-207ENST00000398488 MIB2Q96AX9 1013 aa14.51□□□□□ -0.09
MBD1-207ENST00000398488 FRMD6Q96NE9 622 aa14.51□□□□□ -0.09
MBD1-207ENST00000398488 LMF2Q9BU23 707 aaKnown RBP14.51□□□□□ -0.09
MBD1-207ENST00000398488 TMEM120AQ9BXJ8 343 aa14.51□□□□□ -0.09
MBD1-207ENST00000398488 SERHL2Q9H4I8 314 aa14.51□□□□□ -0.09
MBD1-207ENST00000398488 ZNF385DQ9H6B1 395 aa14.51□□□□□ -0.09
MBD1-207ENST00000398488 SLC6A13Q9NSD5 602 aa14.51□□□□□ -0.09
MBD1-207ENST00000398488 ZCCHC3Q9NUD5 404 aaKnown RBP14.51□□□□□ -0.09
MBD1-207ENST00000398488 GPATCH2Q9NW75 528 aa14.51□□□□□ -0.09
MBD1-207ENST00000398488 ZIM2Q9NZV7 527 aa14.51□□□□□ -0.09
MBD1-207ENST00000398488 CNOT11Q9UKZ1 510 aaKnown RBP14.51□□□□□ -0.09
MBD1-207ENST00000398488 HRH3Q9Y5N1 445 aa14.51□□□□□ -0.09
MBD1-207ENST00000398488 PRSS51A0A1B0GVH4 220 aa14.5□□□□□ -0.09
MBD1-207ENST00000398488 NBASA2RRP1 2371 aa14.5□□□□□ -0.09
MBD1-207ENST00000398488 CFLARO15519 480 aa14.5□□□□□ -0.09
MBD1-207ENST00000398488 PPM1BO75688 479 aa14.5□□□□□ -0.09
MBD1-207ENST00000398488 RASAL1O95294 804 aa14.5□□□□□ -0.09
MBD1-207ENST00000398488 IGKV1D-16P01601 117 aa14.5□□□□□ -0.09
MBD1-207ENST00000398488 PGRP06401 933 aa14.5□□□□□ -0.09
MBD1-207ENST00000398488 DNASE1L1P49184 302 aa14.5□□□□□ -0.09
MBD1-207ENST00000398488 CCT3P49368 545 aaKnown RBP14.5□□□□□ -0.09
MBD1-207ENST00000398488 MRPL19P49406 292 aaKnown RBP14.5□□□□□ -0.09
MBD1-207ENST00000398488 MEOX1P50221 254 aa14.5□□□□□ -0.09
MBD1-207ENST00000398488 DCAF7P61962 342 aa14.5□□□□□ -0.09
MBD1-207ENST00000398488 PRAMEF20Q5VT98 475 aa14.5□□□□□ -0.09
MBD1-207ENST00000398488 MIER2Q8N344 545 aa14.5□□□□□ -0.09
MBD1-207ENST00000398488 NATD1Q8N6N6 113 aa14.5□□□□□ -0.09
MBD1-207ENST00000398488 HORMAD2Q8N7B1 307 aa14.5□□□□□ -0.09
MBD1-207ENST00000398488 SLC16A11Q8NCK7 471 aa14.5□□□□□ -0.09
MBD1-207ENST00000398488 FAM13CQ8NE31 585 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms