RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 ADPRMQ3LIE5 342 aa2.18□□□□□ -2.06
CD47-203ENST00000398258 RIPPLY2Q5TAB7 128 aa2.18□□□□□ -2.06
CD47-203ENST00000398258 SLC39A4Q6P5W5 647 aa2.18□□□□□ -2.06
CD47-203ENST00000398258 RFWD3Q6PCD5 774 aa2.18□□□□□ -2.06
CD47-203ENST00000398258 ZNF562Q6V9R5 426 aa2.18□□□□□ -2.06
CD47-203ENST00000398258 TMEM184AQ6ZMB5 413 aa2.18□□□□□ -2.06
CD47-203ENST00000398258 TMUB2Q71RG4 321 aa2.18□□□□□ -2.06
CD47-203ENST00000398258 CATSPER3Q86XQ3 398 aa2.18□□□□□ -2.06
CD47-203ENST00000398258 PYROXD2Q8N2H3 581 aa2.18□□□□□ -2.06
CD47-203ENST00000398258 CCDC110Q8TBZ0 833 aa2.18□□□□□ -2.06
CD47-203ENST00000398258 MCHR2Q969V1 340 aa2.18□□□□□ -2.06
CD47-203ENST00000398258 ADIPOR1Q96A54 375 aa2.18□□□□□ -2.06
CD47-203ENST00000398258 BIRC7Q96CA5 298 aa2.18□□□□□ -2.06
CD47-203ENST00000398258 TESK2Q96S53 571 aa2.18□□□□□ -2.06
CD47-203ENST00000398258 FAM173AQ9BQD7 235 aa2.18□□□□□ -2.06
CD47-203ENST00000398258 TRIM6Q9C030 488 aaPredicted RBP2.18□□□□□ -2.06
CD47-203ENST00000398258 LIME1Q9H400 295 aa2.18□□□□□ -2.06
CD47-203ENST00000398258 COG4Q9H9E3 785 aa2.18□□□□□ -2.06
CD47-203ENST00000398258 AMBNQ9NP70 447 aa2.18□□□□□ -2.06
CD47-203ENST00000398258 CENPMQ9NSP4 180 aa2.18□□□□□ -2.06
CD47-203ENST00000398258 GPR83Q9NYM4 423 aa2.18□□□□□ -2.06
CD47-203ENST00000398258 DHRS7Q9Y394 339 aa2.18□□□□□ -2.06
CD47-203ENST00000398258 FBXO7Q9Y3I1 522 aa2.18□□□□□ -2.06
CD47-203ENST00000398258 KLF2Q9Y5W3 355 aaPredicted RBP2.18□□□□□ -2.06
CD47-203ENST00000398258 ABCC4O15439 1325 aa2.17□□□□□ -2.06
CD47-203ENST00000398258 TDRD15B5MCY1 1934 aaKnown RBP2.17□□□□□ -2.06
CD47-203ENST00000398258 PCNX3Q9H6A9 2034 aa2.17□□□□□ -2.06
CD47-203ENST00000398258 IGHV3OR16-12A0A075B7B8 117 aa2.17□□□□□ -2.06
CD47-203ENST00000398258 LRIT2A6NDA9 550 aa2.17□□□□□ -2.06
CD47-203ENST00000398258 ANKRD30BLA7E2S9 258 aa2.17□□□□□ -2.06
CD47-203ENST00000398258 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.17□□□□□ -2.06
CD47-203ENST00000398258 NDC80O14777 642 aa2.17□□□□□ -2.06
CD47-203ENST00000398258 ALOX15BO15296 676 aa2.17□□□□□ -2.06
CD47-203ENST00000398258 TM9SF1O15321 606 aa2.17□□□□□ -2.06
CD47-203ENST00000398258 CFLARO15519 480 aa2.17□□□□□ -2.06
CD47-203ENST00000398258 PI15O43692 258 aa2.17□□□□□ -2.06
CD47-203ENST00000398258 RAMP1O60894 148 aa2.17□□□□□ -2.06
CD47-203ENST00000398258 SMPD2O60906 423 aa2.17□□□□□ -2.06
CD47-203ENST00000398258 VPS26AO75436 327 aa2.17□□□□□ -2.06
CD47-203ENST00000398258 PDE5AO76074 875 aa2.17□□□□□ -2.06
CD47-203ENST00000398258 DIRAS3O95661 229 aa2.17□□□□□ -2.06
CD47-203ENST00000398258 GOT2P00505 430 aaKnown RBP2.17□□□□□ -2.06
CD47-203ENST00000398258 AK1P00568 194 aa2.17□□□□□ -2.06
CD47-203ENST00000398258 RENP00797 406 aa2.17□□□□□ -2.06
CD47-203ENST00000398258 IGHV3-9P01782 118 aa2.17□□□□□ -2.06
CD47-203ENST00000398258 IGHG3P01860 377 aa2.17□□□□□ -2.06
CD47-203ENST00000398258 CHRNA1P02708 482 aa2.17□□□□□ -2.06
CD47-203ENST00000398258 HEXBP07686 556 aa2.17□□□□□ -2.06
CD47-203ENST00000398258 GSTA1P08263 222 aa2.17□□□□□ -2.06
CD47-203ENST00000398258 HOXD4P09016 255 aaPredicted RBP2.17□□□□□ -2.06
CD47-203ENST00000398258 HTR2AP28223 471 aa2.17□□□□□ -2.06
CD47-203ENST00000398258 HAND2P61296 217 aa2.17□□□□□ -2.06
CD47-203ENST00000398258 CD300CQ08708 224 aa2.17□□□□□ -2.06
CD47-203ENST00000398258 TAF7Q15545 349 aaPredicted RBP2.17□□□□□ -2.06
CD47-203ENST00000398258 DCAF4L1Q3SXM0 396 aa2.17□□□□□ -2.06
CD47-203ENST00000398258 DNAJC21Q5F1R6 531 aaKnown RBP2.17□□□□□ -2.06
CD47-203ENST00000398258 ZNF506Q5JVG8 444 aa2.17□□□□□ -2.06
CD47-203ENST00000398258 REP15Q6BDI9 236 aa2.17□□□□□ -2.06
CD47-203ENST00000398258 DMKNQ6E0U4 476 aaPredicted RBP2.17□□□□□ -2.06
CD47-203ENST00000398258 ARMCX5Q6P1M9 558 aa2.17□□□□□ -2.06
CD47-203ENST00000398258 LRRC8BQ6P9F7 803 aa2.17□□□□□ -2.06
CD47-203ENST00000398258 EMBQ6PCB8 327 aa2.17□□□□□ -2.06
CD47-203ENST00000398258 PAQR6Q6TCH4 344 aa2.17□□□□□ -2.06
CD47-203ENST00000398258 CBWD2Q8IUF1 395 aa2.17□□□□□ -2.06
CD47-203ENST00000398258 SPAG16Q8N0X2 631 aa2.17□□□□□ -2.06
CD47-203ENST00000398258 FNDC8Q8TC99 324 aa2.17□□□□□ -2.06
CD47-203ENST00000398258 LHX4Q969G2 390 aa2.17□□□□□ -2.06
CD47-203ENST00000398258 PINX1Q96BK5 328 aaKnown RBP2.17□□□□□ -2.06
CD47-203ENST00000398258 ZNF414Q96IQ9 312 aa2.17□□□□□ -2.06
CD47-203ENST00000398258 ZNF597Q96LX8 424 aa2.17□□□□□ -2.06
CD47-203ENST00000398258 PSMB7Q99436 277 aa2.17□□□□□ -2.06
CD47-203ENST00000398258 UBXN6Q9BZV1 441 aa2.17□□□□□ -2.06
CD47-203ENST00000398258 TRIM9Q9C026 710 aa2.17□□□□□ -2.06
CD47-203ENST00000398258 LRRCC1Q9C099 1032 aa2.17□□□□□ -2.06
CD47-203ENST00000398258 TSPY26PQ9H489 355 aa2.17□□□□□ -2.06
CD47-203ENST00000398258 RPAP3Q9H6T3 665 aaPredicted RBP2.17□□□□□ -2.06
CD47-203ENST00000398258 HEXA-AS1Q9H8Q6 139 aa2.17□□□□□ -2.06
CD47-203ENST00000398258 SP140LQ9H930 580 aa2.17□□□□□ -2.06
CD47-203ENST00000398258 ACTR8Q9H981 624 aa2.17□□□□□ -2.06
CD47-203ENST00000398258 IL1RL2Q9HB29 575 aa2.17□□□□□ -2.06
CD47-203ENST00000398258 VAT1LQ9HCJ6 419 aa2.17□□□□□ -2.06
CD47-203ENST00000398258 TRPV5Q9NQA5 729 aa2.17□□□□□ -2.06
CD47-203ENST00000398258 SLC35D1Q9NTN3 355 aa2.17□□□□□ -2.06
CD47-203ENST00000398258 EIF3KQ9UBQ5 218 aaKnown RBP2.17□□□□□ -2.06
CD47-203ENST00000398258 SEC14L4Q9UDX3 406 aa2.17□□□□□ -2.06
CD47-203ENST00000398258 FZR1Q9UM11 496 aa2.17□□□□□ -2.06
CD47-203ENST00000398258 MGAT4AQ9UM21 535 aa2.17□□□□□ -2.06
CD47-203ENST00000398258 RNF6Q9Y252 685 aa2.17□□□□□ -2.06
CD47-203ENST00000398258 CPQQ9Y646 472 aa2.17□□□□□ -2.06
CD47-203ENST00000398258 TEX48A0A1B0GUV7 120 aa2.16□□□□□ -2.06
CD47-203ENST00000398258 EI24O14681 340 aa2.16□□□□□ -2.06
CD47-203ENST00000398258 RANBP6O60518 1105 aaKnown RBP2.16□□□□□ -2.06
CD47-203ENST00000398258 NOL3O60936 208 aaKnown RBP2.16□□□□□ -2.06
CD47-203ENST00000398258 IGSF6O95976 241 aa2.16□□□□□ -2.06
CD47-203ENST00000398258 IGHV3-13P01766 116 aa2.16□□□□□ -2.06
CD47-203ENST00000398258 PTMSP20962 102 aa2.16□□□□□ -2.06
CD47-203ENST00000398258 PPP2R1BP30154 601 aa2.16□□□□□ -2.06
CD47-203ENST00000398258 STK19P49842 368 aaPredicted RBP2.16□□□□□ -2.06
CD47-203ENST00000398258 IL9RQ01113 521 aa2.16□□□□□ -2.06
CD47-203ENST00000398258 FCHO2Q0JRZ9 810 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms