RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 TSSK6Q9BXA6 273 aa15.09■□□□□ 0.01
CHMP1A-201ENST00000397901 RSPO3Q9BXY4 272 aaPredicted RBP15.09■□□□□ 0.01
CHMP1A-201ENST00000397901 SERHL2Q9H4I8 314 aa15.09■□□□□ 0.01
CHMP1A-201ENST00000397901 PPP1R3EQ9H7J1 279 aa15.09■□□□□ 0.01
CHMP1A-201ENST00000397901 FZD3Q9NPG1 666 aa15.09■□□□□ 0.01
CHMP1A-201ENST00000397901 LYARQ9NX58 379 aaKnown RBP15.09■□□□□ 0.01
CHMP1A-201ENST00000397901 SPG21Q9NZD8 308 aa15.09■□□□□ 0.01
CHMP1A-201ENST00000397901 KLF2Q9Y5W3 355 aaPredicted RBP15.09■□□□□ 0.01
CHMP1A-201ENST00000397901 ADAP00813 363 aa15.09■□□□□ 0.01
CHMP1A-201ENST00000397901 CTSAP10619 480 aa15.09■□□□□ 0.01
CHMP1A-201ENST00000397901 INPP1P49441 399 aa15.09■□□□□ 0.01
CHMP1A-201ENST00000397901 XKP51811 444 aa15.09■□□□□ 0.01
CHMP1A-201ENST00000397901 UAP1L1Q3KQV9 507 aa15.09■□□□□ 0.01
CHMP1A-201ENST00000397901 HENMT1Q5T8I9 393 aaKnown RBP15.09■□□□□ 0.01
CHMP1A-201ENST00000397901 C1orf53Q5VUE5 145 aa15.09■□□□□ 0.01
CHMP1A-201ENST00000397901 REEP3Q6NUK4 255 aa15.09■□□□□ 0.01
CHMP1A-201ENST00000397901 METAP1DQ6UB28 335 aaPredicted RBP15.09■□□□□ 0.01
CHMP1A-201ENST00000397901 TMEM107Q6UX40 140 aa15.09■□□□□ 0.01
CHMP1A-201ENST00000397901 RTL4Q6ZR62 310 aa15.09■□□□□ 0.01
CHMP1A-201ENST00000397901 GPR32P1Q8NGA4 272 aa15.09■□□□□ 0.01
CHMP1A-201ENST00000397901 OR2A12Q8NGT7 310 aa15.09■□□□□ 0.01
CHMP1A-201ENST00000397901 RAB8BQ92930 207 aa15.09■□□□□ 0.01
CHMP1A-201ENST00000397901 SOSTQ9BQB4 213 aa15.09■□□□□ 0.01
CHMP1A-201ENST00000397901 TMEM43Q9BTV4 400 aa15.09■□□□□ 0.01
CHMP1A-201ENST00000397901 SYNDIG1Q9H7V2 258 aa15.09■□□□□ 0.01
CHMP1A-201ENST00000397901 SLC28A3Q9HAS3 691 aa15.09■□□□□ 0.01
CHMP1A-201ENST00000397901 MYNNQ9NPC7 610 aa15.09■□□□□ 0.01
CHMP1A-201ENST00000397901 TAAR2Q9P1P5 351 aa15.09■□□□□ 0.01
CHMP1A-201ENST00000397901 KCND3Q9UK17 655 aa15.09■□□□□ 0.01
CHMP1A-201ENST00000397901 STON1Q9Y6Q2 735 aa15.09■□□□□ 0.01
CHMP1A-201ENST00000397901 hCG_1807616A0A1W2PRN6 198 aa15.08■□□□□ 0.01
CHMP1A-201ENST00000397901 ARRDC5A6NEK1 342 aa15.08■□□□□ 0.01
CHMP1A-201ENST00000397901 LEFTY2O00292 366 aa15.08■□□□□ 0.01
CHMP1A-201ENST00000397901 GRM6O15303 877 aa15.08■□□□□ 0.01
CHMP1A-201ENST00000397901 SH3BP5O60239 455 aa15.08■□□□□ 0.01
CHMP1A-201ENST00000397901 SRPRAP08240 638 aaKnown RBP15.08■□□□□ 0.01
CHMP1A-201ENST00000397901 ELAVL4P26378 380 aaKnown RBP15.08■□□□□ 0.01
CHMP1A-201ENST00000397901 PTBP1P26599 531 aaKnown RBP eCLIP15.08■□□□□ 0.01
CHMP1A-201ENST00000397901 NUP62P37198 522 aaPredicted RBP15.08■□□□□ 0.01
CHMP1A-201ENST00000397901 SNRPGP62308 76 aaKnown RBP15.08■□□□□ 0.01
CHMP1A-201ENST00000397901 DCST1Q5T197 706 aa15.08■□□□□ 0.01
CHMP1A-201ENST00000397901 TRILQ7L0X0 811 aa15.08■□□□□ 0.01
CHMP1A-201ENST00000397901 LUZP2Q86TE4 346 aa15.08■□□□□ 0.01
CHMP1A-201ENST00000397901 C2orf73Q8N5S3 287 aaPredicted RBP15.08■□□□□ 0.01
CHMP1A-201ENST00000397901 TRAM1L1Q8N609 369 aa15.08■□□□□ 0.01
CHMP1A-201ENST00000397901 HORMAD2Q8N7B1 307 aa15.08■□□□□ 0.01
CHMP1A-201ENST00000397901 SLC38A5Q8WUX1 472 aa15.08■□□□□ 0.01
CHMP1A-201ENST00000397901 UCN3Q969E3 161 aa15.08■□□□□ 0.01
CHMP1A-201ENST00000397901 RBP7Q96R05 134 aa15.08■□□□□ 0.01
CHMP1A-201ENST00000397901 KCNJ15Q99712 375 aa15.08■□□□□ 0.01
CHMP1A-201ENST00000397901 WFDC6Q9BQY6 131 aa15.08■□□□□ 0.01
CHMP1A-201ENST00000397901 NLNQ9BYT8 704 aa15.08■□□□□ 0.01
CHMP1A-201ENST00000397901 GSX2Q9BZM3 304 aa15.08■□□□□ 0.01
CHMP1A-201ENST00000397901 SLC6A17Q9H1V8 727 aa15.08■□□□□ 0.01
CHMP1A-201ENST00000397901 MTG2Q9H4K7 406 aa15.08■□□□□ 0.01
CHMP1A-201ENST00000397901 TXNL4BQ9NX01 149 aaKnown RBP15.08■□□□□ 0.01
CHMP1A-201ENST00000397901 A0A1W2PRU2 124 aa15.08■□□□□ 0
CHMP1A-201ENST00000397901 ANKDD1BA6NHY2 528 aa15.08■□□□□ 0
CHMP1A-201ENST00000397901 ZNF98A6NK75 572 aa15.08■□□□□ 0
CHMP1A-201ENST00000397901 SGK494L7N484 410 aa15.08■□□□□ 0
CHMP1A-201ENST00000397901 HRO43593 1189 aa15.08■□□□□ 0
CHMP1A-201ENST00000397901 TPST2O60704 377 aa15.08■□□□□ 0
CHMP1A-201ENST00000397901 LEFTY1O75610 366 aa15.08■□□□□ 0
CHMP1A-201ENST00000397901 B3GALNT1O75752 331 aa15.08■□□□□ 0
CHMP1A-201ENST00000397901 C1orf105O95561 183 aa15.08■□□□□ 0
CHMP1A-201ENST00000397901 C1GALT1C1LP0DN25 315 aa15.08■□□□□ 0
CHMP1A-201ENST00000397901 LAG3P18627 525 aa15.08■□□□□ 0
CHMP1A-201ENST00000397901 RAB3AP20336 220 aa15.08■□□□□ 0
CHMP1A-201ENST00000397901 S100A12P80511 92 aa15.08■□□□□ 0
CHMP1A-201ENST00000397901 TMEM115Q12893 351 aaPredicted RBP15.08■□□□□ 0
CHMP1A-201ENST00000397901 ABI3BPQ7Z7G0 1075 aa15.08■□□□□ 0
CHMP1A-201ENST00000397901 ADGRD2Q7Z7M1 963 aa15.08■□□□□ 0
CHMP1A-201ENST00000397901 TMEM25Q86YD3 366 aa15.08■□□□□ 0
CHMP1A-201ENST00000397901 KLHDC8AQ8IYD2 350 aa15.08■□□□□ 0
CHMP1A-201ENST00000397901 SRFBP1Q8NEF9 429 aaKnown RBP15.08■□□□□ 0
CHMP1A-201ENST00000397901 OR6M1Q8NGM8 313 aa15.08■□□□□ 0
CHMP1A-201ENST00000397901 TMEM19Q96HH6 336 aa15.08■□□□□ 0
CHMP1A-201ENST00000397901 LINC00052Q96N35 136 aa15.08■□□□□ 0
CHMP1A-201ENST00000397901 TVP23BQ9NYZ1 205 aa15.08■□□□□ 0
CHMP1A-201ENST00000397901 ZNF222Q9UK12 451 aa15.08■□□□□ 0
CHMP1A-201ENST00000397901 PRELID3BQ9Y3B1 194 aa15.08■□□□□ 0
CHMP1A-201ENST00000397901 MAB21L2Q9Y586 359 aa15.08■□□□□ 0
CHMP1A-201ENST00000397901 SESN1Q9Y6P5 492 aa15.08■□□□□ 0
CHMP1A-201ENST00000397901 DENND4CQ5VZ89 1909 aa15.08■□□□□ 0
CHMP1A-201ENST00000397901 A0A0A6YYJ9 748 aa15.07■□□□□ 0
CHMP1A-201ENST00000397901 ABHD14A-ACY1A0A1B0GW23 586 aa15.07■□□□□ 0
CHMP1A-201ENST00000397901 NEDD8-MDP1E9PL57 170 aa15.07■□□□□ 0
CHMP1A-201ENST00000397901 FOXE1O00358 373 aaPredicted RBP15.07■□□□□ 0
CHMP1A-201ENST00000397901 LRRTM2O43300 516 aa15.07■□□□□ 0
CHMP1A-201ENST00000397901 LILRB3O75022 631 aa15.07■□□□□ 0
CHMP1A-201ENST00000397901 APOL3O95236 402 aa15.07■□□□□ 0
CHMP1A-201ENST00000397901 ACSM4P0C7M7 580 aa15.07■□□□□ 0
CHMP1A-201ENST00000397901 ANXA3P12429 323 aa15.07■□□□□ 0
CHMP1A-201ENST00000397901 RECQLP46063 649 aaPredicted RBP15.07■□□□□ 0
CHMP1A-201ENST00000397901 PRLHRP49683 370 aa15.07■□□□□ 0
CHMP1A-201ENST00000397901 HTRA3P83110 453 aa15.07■□□□□ 0
CHMP1A-201ENST00000397901 ILKQ13418 452 aa15.07■□□□□ 0
CHMP1A-201ENST00000397901 NCF4Q15080 339 aa15.07■□□□□ 0
CHMP1A-201ENST00000397901 ARSIQ5FYB1 569 aa15.07■□□□□ 0
CHMP1A-201ENST00000397901 MEDAGQ5VYS4 303 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms