RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 IRAK4Q9NWZ3 460 aa15.13■□□□□ 0.01
SNX6-202ENST00000396526 C19orf53Q9UNZ5 99 aaPredicted RBP15.13■□□□□ 0.01
SNX6-202ENST00000396526 METTL12A8MUP2 240 aa15.13■□□□□ 0.01
SNX6-202ENST00000396526 OR10H2O60403 315 aa15.13■□□□□ 0.01
SNX6-202ENST00000396526 AK1P00568 194 aa15.13■□□□□ 0.01
SNX6-202ENST00000396526 ZNF182P17025 639 aaPredicted RBP15.13■□□□□ 0.01
SNX6-202ENST00000396526 GP2P55259 537 aaKnown RBP15.13■□□□□ 0.01
SNX6-202ENST00000396526 PODNL1Q6PEZ8 512 aa15.13■□□□□ 0.01
SNX6-202ENST00000396526 IQCHQ86VS3 1027 aa15.13■□□□□ 0.01
SNX6-202ENST00000396526 FRMD1Q8N878 549 aa15.13■□□□□ 0.01
SNX6-202ENST00000396526 CDRT4Q8N9R6 151 aa15.13■□□□□ 0.01
SNX6-202ENST00000396526 LMX1AQ8TE12 382 aa15.13■□□□□ 0.01
SNX6-202ENST00000396526 APH1BQ8WW43 257 aa15.13■□□□□ 0.01
SNX6-202ENST00000396526 SLC35A4Q96G79 324 aa15.13■□□□□ 0.01
SNX6-202ENST00000396526 KRCC1Q9NPI7 259 aaPredicted RBP15.13■□□□□ 0.01
SNX6-202ENST00000396526 NECTIN3Q9NQS3 549 aa15.13■□□□□ 0.01
SNX6-202ENST00000396526 A0A087WV62 115 aa15.13■□□□□ 0.01
SNX6-202ENST00000396526 UBXN7O94888 489 aa15.13■□□□□ 0.01
SNX6-202ENST00000396526 CDK1P06493 297 aa15.13■□□□□ 0.01
SNX6-202ENST00000396526 CELA2BP08218 269 aaPredicted RBP15.13■□□□□ 0.01
SNX6-202ENST00000396526 SHC2P98077 582 aa15.13■□□□□ 0.01
SNX6-202ENST00000396526 SMAD2Q15796 467 aaKnown RBP15.13■□□□□ 0.01
SNX6-202ENST00000396526 TBCEQ15813 527 aaPredicted RBP15.13■□□□□ 0.01
SNX6-202ENST00000396526 SLC16A11Q8NCK7 471 aa15.13■□□□□ 0.01
SNX6-202ENST00000396526 TOR1AIP2Q8NFQ8 470 aa15.13■□□□□ 0.01
SNX6-202ENST00000396526 LRRC61Q9BV99 259 aa15.13■□□□□ 0.01
SNX6-202ENST00000396526 ITPAQ9BY32 194 aa15.13■□□□□ 0.01
SNX6-202ENST00000396526 PIGUQ9H490 435 aa15.13■□□□□ 0.01
SNX6-202ENST00000396526 CNOT2Q9NZN8 540 aaKnown RBP15.13■□□□□ 0.01
SNX6-202ENST00000396526 A0A1W2PS29 197 aa15.12■□□□□ 0.01
SNX6-202ENST00000396526 FAM170BA6NMN3 283 aa15.12■□□□□ 0.01
SNX6-202ENST00000396526 TNNI3P19429 210 aa15.12■□□□□ 0.01
SNX6-202ENST00000396526 RACK1P63244 317 aaKnown RBP15.12■□□□□ 0.01
SNX6-202ENST00000396526 ALDH6A1Q02252 535 aaKnown RBP15.12■□□□□ 0.01
SNX6-202ENST00000396526 PGBD2Q6P3X8 592 aa15.12■□□□□ 0.01
SNX6-202ENST00000396526 MCATQ8IVS2 390 aaKnown RBP15.12■□□□□ 0.01
SNX6-202ENST00000396526 C19orf47Q8N9M1 422 aaKnown RBP15.12■□□□□ 0.01
SNX6-202ENST00000396526 CADM4Q8NFZ8 388 aa15.12■□□□□ 0.01
SNX6-202ENST00000396526 OR8J1Q8NGP2 316 aa15.12■□□□□ 0.01
SNX6-202ENST00000396526 KLHL6Q8WZ60 621 aa15.12■□□□□ 0.01
SNX6-202ENST00000396526 GGHQ92820 318 aa15.12■□□□□ 0.01
SNX6-202ENST00000396526 CSF3RQ99062 836 aa15.12■□□□□ 0.01
SNX6-202ENST00000396526 MIR1-1HGQ9H1L0 117 aa15.12■□□□□ 0.01
SNX6-202ENST00000396526 ANKRD19PQ9H560 264 aa15.12■□□□□ 0.01
SNX6-202ENST00000396526 ZNF226Q9NYT6 803 aa15.12■□□□□ 0.01
SNX6-202ENST00000396526 FTSJ1Q9UET6 329 aa15.12■□□□□ 0.01
SNX6-202ENST00000396526 TRIM64BA6NI03 449 aa15.12■□□□□ 0.01
SNX6-202ENST00000396526 SNTNA6NMZ2 147 aa15.12■□□□□ 0.01
SNX6-202ENST00000396526 MAN1A2O60476 641 aa15.12■□□□□ 0.01
SNX6-202ENST00000396526 TPST2O60704 377 aa15.12■□□□□ 0.01
SNX6-202ENST00000396526 BCAS1O75363 584 aaPredicted RBP15.12■□□□□ 0.01
SNX6-202ENST00000396526 CYP7B1O75881 506 aa15.12■□□□□ 0.01
SNX6-202ENST00000396526 ZBTB11O95625 1053 aaPredicted RBP15.12■□□□□ 0.01
SNX6-202ENST00000396526 CSF2P04141 144 aa15.12■□□□□ 0.01
SNX6-202ENST00000396526 LSSP48449 732 aa15.12■□□□□ 0.01
SNX6-202ENST00000396526 MAN2A2P49641 1150 aa15.12■□□□□ 0.01
SNX6-202ENST00000396526 CLK1P49759 484 aaKnown RBP15.12■□□□□ 0.01
SNX6-202ENST00000396526 RAB38P57729 211 aa15.12■□□□□ 0.01
SNX6-202ENST00000396526 INAVAQ3KP66 663 aa15.12■□□□□ 0.01
SNX6-202ENST00000396526 LRIT3Q3SXY7 679 aa15.12■□□□□ 0.01
SNX6-202ENST00000396526 ZNF730Q6ZMV8 503 aa15.12■□□□□ 0.01
SNX6-202ENST00000396526 PLEKHM3Q6ZWE6 761 aa15.12■□□□□ 0.01
SNX6-202ENST00000396526 LACC1Q8IV20 430 aa15.12■□□□□ 0.01
SNX6-202ENST00000396526 FAM160A2Q8N612 972 aaPredicted RBP15.12■□□□□ 0.01
SNX6-202ENST00000396526 COX18Q8N8Q8 333 aa15.12■□□□□ 0.01
SNX6-202ENST00000396526 OR4D11Q8NGI4 311 aa15.12■□□□□ 0.01
SNX6-202ENST00000396526 KCNE3Q9Y6H6 103 aa15.12■□□□□ 0.01
SNX6-202ENST00000396526 SCN3AQ9NY46 2000 aa15.12■□□□□ 0.01
SNX6-202ENST00000396526 STK25O00506 426 aa15.11■□□□□ 0.01
SNX6-202ENST00000396526 NUDT6P53370 316 aa15.11■□□□□ 0.01
SNX6-202ENST00000396526 HNRNPKP61978 463 aaKnown RBP eCLIP15.11■□□□□ 0.014e-8■□□□□ 11.2
SNX6-202ENST00000396526 ID2Q02363 134 aa15.11■□□□□ 0.01
SNX6-202ENST00000396526 FUT5Q11128 374 aa15.11■□□□□ 0.01
SNX6-202ENST00000396526 ST3GAL4Q11206 333 aa15.11■□□□□ 0.01
SNX6-202ENST00000396526 SEC23BQ15437 767 aa15.11■□□□□ 0.01
SNX6-202ENST00000396526 ARHGAP11BQ3KRB8 267 aa15.11■□□□□ 0.01
SNX6-202ENST00000396526 AP1ARQ63HQ0 302 aa15.11■□□□□ 0.01
SNX6-202ENST00000396526 CDS1Q92903 461 aa15.11■□□□□ 0.01
SNX6-202ENST00000396526 ANKRA2Q9H9E1 313 aa15.11■□□□□ 0.01
SNX6-202ENST00000396526 C11orf16Q9NQ32 467 aa15.11■□□□□ 0.01
SNX6-202ENST00000396526 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.11■□□□□ 0.01
SNX6-202ENST00000396526 PLOD3O60568 738 aa15.11■□□□□ 0.01
SNX6-202ENST00000396526 COQ9O75208 318 aa15.11■□□□□ 0.01
SNX6-202ENST00000396526 STX11O75558 287 aa15.11■□□□□ 0.01
SNX6-202ENST00000396526 ATP1B1P05026 303 aa15.11■□□□□ 0.01
SNX6-202ENST00000396526 PROS1P07225 676 aa15.11■□□□□ 0.01
SNX6-202ENST00000396526 NME1P15531 152 aaKnown RBP15.11■□□□□ 0.01
SNX6-202ENST00000396526 UBE2UQ5VVX9 321 aa15.11■□□□□ 0.01
SNX6-202ENST00000396526 SLX4IPQ5VYV7 408 aa15.11■□□□□ 0.01
SNX6-202ENST00000396526 TMEM236Q5W0B7 351 aa15.11■□□□□ 0.01
SNX6-202ENST00000396526 HEPHL1Q6MZM0 1159 aa15.11■□□□□ 0.01
SNX6-202ENST00000396526 OLIG3Q7RTU3 272 aa15.11■□□□□ 0.01
SNX6-202ENST00000396526 ZNF438Q7Z4V0 828 aa15.11■□□□□ 0.01
SNX6-202ENST00000396526 ADAMTS18Q8TE60 1221 aa15.11■□□□□ 0.01
SNX6-202ENST00000396526 HLA-CQ95604 372 aa15.11■□□□□ 0.01
SNX6-202ENST00000396526 GIMAP5Q96F15 307 aa15.11■□□□□ 0.01
SNX6-202ENST00000396526 TCTN2Q96GX1 697 aa15.11■□□□□ 0.01
SNX6-202ENST00000396526 EVA1BQ9NVM1 165 aa15.11■□□□□ 0.01
SNX6-202ENST00000396526 MKLN1Q9UL63 735 aa15.11■□□□□ 0.01
SNX6-202ENST00000396526 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms