RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 SOAT1P35610 550 aa17.72■□□□□ 0.43
HOXA9-202ENST00000396345 CORO7P57737 925 aa17.72■□□□□ 0.43
HOXA9-202ENST00000396345 LRRC74AQ0VAA2 488 aa17.72■□□□□ 0.43
HOXA9-202ENST00000396345 ZNHIT3Q15649 155 aaPredicted RBP17.72■□□□□ 0.43
HOXA9-202ENST00000396345 LYPD8Q6UX82 237 aa17.72■□□□□ 0.43
HOXA9-202ENST00000396345 TMEM64Q6YI46 380 aa17.72■□□□□ 0.43
HOXA9-202ENST00000396345 ZNF227Q86WZ6 799 aa17.72■□□□□ 0.43
HOXA9-202ENST00000396345 SLC44A2Q8IWA5 706 aaPredicted RBP17.72■□□□□ 0.43
HOXA9-202ENST00000396345 OR56A1Q8NGH5 318 aa17.72■□□□□ 0.43
HOXA9-202ENST00000396345 SFXN5Q8TD22 340 aa17.72■□□□□ 0.43
HOXA9-202ENST00000396345 TMEM125Q96AQ2 219 aa17.72■□□□□ 0.43
HOXA9-202ENST00000396345 MOAP1Q96BY2 351 aa17.72■□□□□ 0.43
HOXA9-202ENST00000396345 SPACA9Q96E40 222 aaPredicted RBP17.72■□□□□ 0.43
HOXA9-202ENST00000396345 C5orf34Q96MH7 638 aa17.72■□□□□ 0.43
HOXA9-202ENST00000396345 CCDC115Q96NT0 180 aa17.72■□□□□ 0.43
HOXA9-202ENST00000396345 MS4A4EQ96PG1 132 aa17.72■□□□□ 0.43
HOXA9-202ENST00000396345 RABEP2Q9H5N1 569 aa17.72■□□□□ 0.43
HOXA9-202ENST00000396345 NPFFR2Q9Y5X5 522 aa17.72■□□□□ 0.43
HOXA9-202ENST00000396345 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.71■□□□□ 0.43
HOXA9-202ENST00000396345 GMNCA6NCL1 334 aa17.71■□□□□ 0.43
HOXA9-202ENST00000396345 CAPN14A8MX76 684 aa17.71■□□□□ 0.43
HOXA9-202ENST00000396345 SLC25A12O75746 678 aa17.71■□□□□ 0.43
HOXA9-202ENST00000396345 C1QL1O75973 258 aa17.71■□□□□ 0.43
HOXA9-202ENST00000396345 CT45A8P0DMV1 189 aa17.71■□□□□ 0.43
HOXA9-202ENST00000396345 CT45A9P0DMV2 189 aa17.71■□□□□ 0.43
HOXA9-202ENST00000396345 ZNF791Q3KP31 576 aaPredicted RBP17.71■□□□□ 0.43
HOXA9-202ENST00000396345 AGKQ53H12 422 aa17.71■□□□□ 0.43
HOXA9-202ENST00000396345 CT45A2Q5DJT8 189 aa17.71■□□□□ 0.43
HOXA9-202ENST00000396345 SLC25A25Q6KCM7 469 aa17.71■□□□□ 0.43
HOXA9-202ENST00000396345 NPSR1Q6W5P4 371 aa17.71■□□□□ 0.43
HOXA9-202ENST00000396345 RTL4Q6ZR62 310 aa17.71■□□□□ 0.43
HOXA9-202ENST00000396345 WDR53Q7Z5U6 358 aaPredicted RBP17.71■□□□□ 0.43
HOXA9-202ENST00000396345 FUNDC1Q8IVP5 155 aa17.71■□□□□ 0.43
HOXA9-202ENST00000396345 DND1Q8IYX4 353 aaKnown RBP17.71■□□□□ 0.43
HOXA9-202ENST00000396345 PRR22Q8IZ63 422 aa17.71■□□□□ 0.43
HOXA9-202ENST00000396345 ZNF843Q8N446 348 aa17.71■□□□□ 0.43
HOXA9-202ENST00000396345 Q8NA96 180 aa17.71■□□□□ 0.43
HOXA9-202ENST00000396345 OR5AK3PQ8NH89 298 aa17.71■□□□□ 0.43
HOXA9-202ENST00000396345 C10orf82Q8WW14 230 aa17.71■□□□□ 0.43
HOXA9-202ENST00000396345 GIMAP5Q96F15 307 aa17.71■□□□□ 0.43
HOXA9-202ENST00000396345 SGCZQ96LD1 299 aa17.71■□□□□ 0.43
HOXA9-202ENST00000396345 LMF2Q9BU23 707 aaKnown RBP17.71■□□□□ 0.43
HOXA9-202ENST00000396345 HES7Q9BYE0 225 aa17.71■□□□□ 0.43
HOXA9-202ENST00000396345 TRIM4Q9C037 500 aa17.71■□□□□ 0.43
HOXA9-202ENST00000396345 FAM107BQ9H098 131 aa17.71■□□□□ 0.43
HOXA9-202ENST00000396345 NSRP1Q9H0G5 558 aaKnown RBP17.71■□□□□ 0.43
HOXA9-202ENST00000396345 ZNF385DQ9H6B1 395 aa17.71■□□□□ 0.43
HOXA9-202ENST00000396345 TIMMDC1Q9NPL8 285 aa17.71■□□□□ 0.43
HOXA9-202ENST00000396345 KLHL1Q9NR64 748 aa17.71■□□□□ 0.43
HOXA9-202ENST00000396345 TMEM45AQ9NWC5 275 aa17.71■□□□□ 0.43
HOXA9-202ENST00000396345 CCDC167Q9P0B6 97 aa17.71■□□□□ 0.43
HOXA9-202ENST00000396345 PCDHGA10Q9Y5H3 936 aa17.71■□□□□ 0.43
HOXA9-202ENST00000396345 TTC36A6NLP5 189 aa17.7■□□□□ 0.42
HOXA9-202ENST00000396345 TO15178 435 aa17.7■□□□□ 0.42
HOXA9-202ENST00000396345 SORBS2O94875 1100 aaKnown RBP17.7■□□□□ 0.42
HOXA9-202ENST00000396345 SP1P08047 785 aa17.7■□□□□ 0.42
HOXA9-202ENST00000396345 DRD4P21917 467 aa17.7■□□□□ 0.42
HOXA9-202ENST00000396345 ABCD3P28288 659 aa17.7■□□□□ 0.42
HOXA9-202ENST00000396345 PRIM2P49643 509 aa17.7■□□□□ 0.42
HOXA9-202ENST00000396345 TMED10P49755 219 aaKnown RBP17.7■□□□□ 0.42
HOXA9-202ENST00000396345 KCNK10P57789 538 aa17.7■□□□□ 0.42
HOXA9-202ENST00000396345 PSPHP78330 225 aa17.7■□□□□ 0.42
HOXA9-202ENST00000396345 PSG6Q00889 435 aa17.7■□□□□ 0.42
HOXA9-202ENST00000396345 TP53BP2Q13625 1128 aa17.7■□□□□ 0.42
HOXA9-202ENST00000396345 MAPKAPK3Q16644 382 aa17.7■□□□□ 0.42
HOXA9-202ENST00000396345 TIGD2Q4W5G0 525 aa17.7■□□□□ 0.42
HOXA9-202ENST00000396345 ZCCHC12Q6PEW1 402 aa17.7■□□□□ 0.42
HOXA9-202ENST00000396345 BHLHB9Q6PI77 547 aa17.7■□□□□ 0.42
HOXA9-202ENST00000396345 BLOC1S3Q6QNY0 202 aa17.7■□□□□ 0.42
HOXA9-202ENST00000396345 MSANTD1Q6ZTZ1 278 aa17.7■□□□□ 0.42
HOXA9-202ENST00000396345 MDGA2Q7Z553 956 aa17.7■□□□□ 0.42
HOXA9-202ENST00000396345 CPLX4Q7Z7G2 160 aa17.7■□□□□ 0.42
HOXA9-202ENST00000396345 SLC34A3Q8N130 599 aa17.7■□□□□ 0.42
HOXA9-202ENST00000396345 CDRT4Q8N9R6 151 aa17.7■□□□□ 0.42
HOXA9-202ENST00000396345 TMEM178AQ8NBL3 297 aa17.7■□□□□ 0.42
HOXA9-202ENST00000396345 GOT1L1Q8NHS2 421 aaPredicted RBP17.7■□□□□ 0.42
HOXA9-202ENST00000396345 VPS33AQ96AX1 596 aa17.7■□□□□ 0.42
HOXA9-202ENST00000396345 SCMH1Q96GD3 660 aa17.7■□□□□ 0.42
HOXA9-202ENST00000396345 C16orf58Q96GQ5 468 aa17.7■□□□□ 0.42
HOXA9-202ENST00000396345 ELAC2Q9BQ52 826 aaKnown RBP17.7■□□□□ 0.42
HOXA9-202ENST00000396345 RMND5AQ9H871 391 aa17.7■□□□□ 0.42
HOXA9-202ENST00000396345 OR10H1Q9Y4A9 318 aa17.7■□□□□ 0.42
HOXA9-202ENST00000396345 PCDHGB6Q9Y5F9 930 aa17.7■□□□□ 0.42
HOXA9-202ENST00000396345 B8ZZF3 427 aa17.69■□□□□ 0.42
HOXA9-202ENST00000396345 NR5A2O00482 541 aa17.69■□□□□ 0.42
HOXA9-202ENST00000396345 PPM1BO75688 479 aa17.69■□□□□ 0.42
HOXA9-202ENST00000396345 HMGN2P05204 90 aaKnown RBP17.69■□□□□ 0.42
HOXA9-202ENST00000396345 NAGAP17050 411 aa17.69■□□□□ 0.42
HOXA9-202ENST00000396345 UQCRC2P22695 453 aa17.69■□□□□ 0.42
HOXA9-202ENST00000396345 PLCXD2Q0VAA5 305 aa17.69■□□□□ 0.42
HOXA9-202ENST00000396345 RCAN2Q14206 197 aa17.69■□□□□ 0.42
HOXA9-202ENST00000396345 NTRK2Q16620 822 aa17.69■□□□□ 0.42
HOXA9-202ENST00000396345 VPS26BQ4G0F5 336 aa17.69■□□□□ 0.42
HOXA9-202ENST00000396345 MFSD12Q6NUT3 480 aa17.69■□□□□ 0.42
HOXA9-202ENST00000396345 SPATA21Q7Z572 469 aa17.69■□□□□ 0.42
HOXA9-202ENST00000396345 CPSF7Q8N684 471 aaKnown RBP17.69■□□□□ 0.42
HOXA9-202ENST00000396345 GOLM1Q8NBJ4 401 aa17.69■□□□□ 0.42
HOXA9-202ENST00000396345 FAM13CQ8NE31 585 aa17.69■□□□□ 0.42
HOXA9-202ENST00000396345 OR5M3Q8NGP4 307 aa17.69■□□□□ 0.42
HOXA9-202ENST00000396345 SLC9A6Q92581 669 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 310.7 ms