RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 CLEC6AQ6EIG7 209 aa8.08□□□□□ -1.12
ATG4A-205ENST00000394892 VASNQ6EMK4 673 aa8.08□□□□□ -1.12
ATG4A-205ENST00000394892 TMEM211Q6ICI0 200 aa8.08□□□□□ -1.12
ATG4A-205ENST00000394892 TMEM81Q6P7N7 255 aa8.08□□□□□ -1.12
ATG4A-205ENST00000394892 PAOXQ6QHF9 649 aa8.08□□□□□ -1.12
ATG4A-205ENST00000394892 PLXDC2Q6UX71 529 aa8.08□□□□□ -1.12
ATG4A-205ENST00000394892 B3GNT6Q6ZMB0 384 aa8.08□□□□□ -1.12
ATG4A-205ENST00000394892 C10orf107Q8IVU9 208 aa8.08□□□□□ -1.12
ATG4A-205ENST00000394892 DMRTC2Q8IXT2 367 aaPredicted RBP8.08□□□□□ -1.12
ATG4A-205ENST00000394892 RELL2Q8NC24 303 aaPredicted RBP8.08□□□□□ -1.12
ATG4A-205ENST00000394892 CHDHQ8NE62 594 aaPredicted RBP8.08□□□□□ -1.12
ATG4A-205ENST00000394892 ASB5Q8WWX0 329 aa8.08□□□□□ -1.12
ATG4A-205ENST00000394892 TMBIM1Q969X1 311 aa8.08□□□□□ -1.12
ATG4A-205ENST00000394892 POM121Q96HA1 1249 aa8.08□□□□□ -1.12
ATG4A-205ENST00000394892 WDYHV1Q96HA8 205 aa8.08□□□□□ -1.12
ATG4A-205ENST00000394892 TMEM41AQ96HV5 264 aa8.08□□□□□ -1.12
ATG4A-205ENST00000394892 LCORQ96JN0 433 aaPredicted RBP8.08□□□□□ -1.12
ATG4A-205ENST00000394892 BTBD9Q96Q07 612 aa8.08□□□□□ -1.12
ATG4A-205ENST00000394892 SECISBP2Q96T21 854 aaKnown RBP8.08□□□□□ -1.12
ATG4A-205ENST00000394892 G6PC3Q9BUM1 346 aa8.08□□□□□ -1.12
ATG4A-205ENST00000394892 UGT2B28Q9BY64 529 aa8.08□□□□□ -1.12
ATG4A-205ENST00000394892 LDAHQ9H6V9 325 aa8.08□□□□□ -1.12
ATG4A-205ENST00000394892 SLC35C2Q9NQQ7 365 aa8.08□□□□□ -1.12
ATG4A-205ENST00000394892 QPCTLQ9NXS2 382 aa8.08□□□□□ -1.12
ATG4A-205ENST00000394892 FLRT3Q9NZU0 649 aa8.08□□□□□ -1.12
ATG4A-205ENST00000394892 BCAP29Q9UHQ4 241 aa8.08□□□□□ -1.12
ATG4A-205ENST00000394892 BOKQ9UMX3 212 aaPredicted RBP8.08□□□□□ -1.12
ATG4A-205ENST00000394892 EDARQ9UNE0 448 aa8.08□□□□□ -1.12
ATG4A-205ENST00000394892 POLR3HQ9Y535 204 aaPredicted RBP8.08□□□□□ -1.12
ATG4A-205ENST00000394892 GTF3C1Q12789 2109 aa8.08□□□□□ -1.12
ATG4A-205ENST00000394892 CCDC168Q8NDH2 2452 aa8.07□□□□□ -1.12
ATG4A-205ENST00000394892 FRG2CA6NGY1 282 aa8.07□□□□□ -1.12
ATG4A-205ENST00000394892 GOLGA6L10A6NI86 522 aa8.07□□□□□ -1.12
ATG4A-205ENST00000394892 TMEM233B4DJY2 109 aa8.07□□□□□ -1.12
ATG4A-205ENST00000394892 TP53I11O14683 189 aa8.07□□□□□ -1.12
ATG4A-205ENST00000394892 SNPHO15079 494 aa8.07□□□□□ -1.12
ATG4A-205ENST00000394892 PLOD3O60568 738 aa8.07□□□□□ -1.12
ATG4A-205ENST00000394892 WDR1O75083 606 aa8.07□□□□□ -1.12
ATG4A-205ENST00000394892 GUCY1B2O75343 617 aa8.07□□□□□ -1.12
ATG4A-205ENST00000394892 CPA3P15088 417 aa8.07□□□□□ -1.12
ATG4A-205ENST00000394892 BMP7P18075 431 aa8.07□□□□□ -1.12
ATG4A-205ENST00000394892 KRT4P19013 534 aa8.07□□□□□ -1.12
ATG4A-205ENST00000394892 DDCP20711 480 aa8.07□□□□□ -1.12
ATG4A-205ENST00000394892 GDF1P27539 372 aa8.07□□□□□ -1.12
ATG4A-205ENST00000394892 CEACAM8P31997 349 aaPredicted RBP8.07□□□□□ -1.12
ATG4A-205ENST00000394892 PPP2R2AP63151 447 aa8.07□□□□□ -1.12
ATG4A-205ENST00000394892 PSG6Q00889 435 aa8.07□□□□□ -1.12
ATG4A-205ENST00000394892 ACSM2AQ08AH3 577 aa8.07□□□□□ -1.12
ATG4A-205ENST00000394892 UGT3A2Q3SY77 523 aa8.07□□□□□ -1.12
ATG4A-205ENST00000394892 ACSF3Q4G176 576 aaPredicted RBP8.07□□□□□ -1.12
ATG4A-205ENST00000394892 ZNF385BQ569K4 471 aa8.07□□□□□ -1.12
ATG4A-205ENST00000394892 SPIN4Q56A73 249 aa8.07□□□□□ -1.12
ATG4A-205ENST00000394892 NHSL2Q5HYW2 709 aa8.07□□□□□ -1.12
ATG4A-205ENST00000394892 HLA-DQA1Q5Y7H0 255 aa8.07□□□□□ -1.12
ATG4A-205ENST00000394892 TMEM198Q66K66 360 aa8.07□□□□□ -1.12
ATG4A-205ENST00000394892 ACSM2BQ68CK6 577 aa8.07□□□□□ -1.12
ATG4A-205ENST00000394892 ANGPTL8Q6UXH0 198 aa8.07□□□□□ -1.12
ATG4A-205ENST00000394892 ACAD11Q709F0 780 aa8.07□□□□□ -1.12
ATG4A-205ENST00000394892 NUP54Q7Z3B4 507 aa8.07□□□□□ -1.12
ATG4A-205ENST00000394892 WDR53Q7Z5U6 358 aaPredicted RBP8.07□□□□□ -1.12
ATG4A-205ENST00000394892 YRDCQ86U90 279 aaKnown RBP8.07□□□□□ -1.12
ATG4A-205ENST00000394892 TMEM200AQ86VY9 491 aa8.07□□□□□ -1.12
ATG4A-205ENST00000394892 BANPQ8N9N5 519 aa8.07□□□□□ -1.12
ATG4A-205ENST00000394892 FAM83FQ8NEG4 500 aaPredicted RBP8.07□□□□□ -1.12
ATG4A-205ENST00000394892 TNIP2Q8NFZ5 429 aa8.07□□□□□ -1.12
ATG4A-205ENST00000394892 NUDT8Q8WV74 236 aa8.07□□□□□ -1.12
ATG4A-205ENST00000394892 UBLCP1Q8WVY7 318 aaPredicted RBP8.07□□□□□ -1.12
ATG4A-205ENST00000394892 SARAFQ96BY9 339 aa8.07□□□□□ -1.12
ATG4A-205ENST00000394892 HSPBAP1Q96EW2 488 aa8.07□□□□□ -1.12
ATG4A-205ENST00000394892 SLC35A4Q96G79 324 aa8.07□□□□□ -1.12
ATG4A-205ENST00000394892 FCRL1Q96LA6 429 aa8.07□□□□□ -1.12
ATG4A-205ENST00000394892 ZNF597Q96LX8 424 aa8.07□□□□□ -1.12
ATG4A-205ENST00000394892 ZNF559Q9BR84 538 aa8.07□□□□□ -1.12
ATG4A-205ENST00000394892 FAIM2Q9BWQ8 316 aa8.07□□□□□ -1.12
ATG4A-205ENST00000394892 PRDM14Q9GZV8 571 aa8.07□□□□□ -1.12
ATG4A-205ENST00000394892 GLIPR2Q9H4G4 154 aa8.07□□□□□ -1.12
ATG4A-205ENST00000394892 FOLH1BQ9HBA9 442 aa8.07□□□□□ -1.12
ATG4A-205ENST00000394892 SERHLQ9NQF3 203 aa8.07□□□□□ -1.12
ATG4A-205ENST00000394892 NMRK1Q9NWW6 199 aa8.07□□□□□ -1.12
ATG4A-205ENST00000394892 ALKBH4Q9NXW9 302 aa8.07□□□□□ -1.12
ATG4A-205ENST00000394892 TAS2R7Q9NYW3 318 aa8.07□□□□□ -1.12
ATG4A-205ENST00000394892 SLC17A7Q9P2U7 560 aa8.07□□□□□ -1.12
ATG4A-205ENST00000394892 GIMAP2Q9UG22 337 aa8.07□□□□□ -1.12
ATG4A-205ENST00000394892 FBXL2Q9UKC9 423 aa8.07□□□□□ -1.12
ATG4A-205ENST00000394892 SETD2Q9BYW2 2564 aaPredicted RBP8.06□□□□□ -1.12
ATG4A-205ENST00000394892 GNG14A0A1W2PPG7 69 aa8.06□□□□□ -1.12
ATG4A-205ENST00000394892 PRAMEF25A6NGN4 478 aa8.06□□□□□ -1.12
ATG4A-205ENST00000394892 FIGNL2A6NMB9 653 aa8.06□□□□□ -1.12
ATG4A-205ENST00000394892 UPK1AO00322 258 aa8.06□□□□□ -1.12
ATG4A-205ENST00000394892 ACOX3O15254 700 aa8.06□□□□□ -1.12
ATG4A-205ENST00000394892 ZIC3O60481 467 aa8.06□□□□□ -1.12
ATG4A-205ENST00000394892 TRAPPC6AO75865 159 aa8.06□□□□□ -1.12
ATG4A-205ENST00000394892 SNX4O95219 450 aa8.06□□□□□ -1.12
ATG4A-205ENST00000394892 ZWINTO95229 277 aa8.06□□□□□ -1.12
ATG4A-205ENST00000394892 EPPINO95925 133 aa8.06□□□□□ -1.12
ATG4A-205ENST00000394892 IGKV1D-16P01601 117 aa8.06□□□□□ -1.12
ATG4A-205ENST00000394892 JUNP05412 331 aaKnown RBP8.06□□□□□ -1.12
ATG4A-205ENST00000394892 CHRNGP07510 517 aa8.06□□□□□ -1.12
ATG4A-205ENST00000394892 HOXD4P09016 255 aaPredicted RBP8.06□□□□□ -1.12
ATG4A-205ENST00000394892 ALDH3A1P30838 453 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms