RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 MANEAQ5SRI9 462 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 SFRP5Q5T4F7 317 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 ATG9BQ674R7 924 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 KDM4DQ6B0I6 523 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 FRMPD2BQ6IN97 320 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 TMEM179BQ7Z7N9 219 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 BEST3Q8N1M1 668 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 SLC5A8Q8N695 610 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 DBF4BQ8NFT6 615 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 PPTC7Q8NI37 304 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 CHD5Q8TDI0 1954 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 RXFP4Q8TDU9 374 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 ZNF583Q96ND8 569 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 NSUN5Q96P11 429 aaKnown RBP7.25□□□□□ -1.25
VTI1A-201ENST00000393077 TEFMQ96QE5 360 aaKnown RBP7.25□□□□□ -1.25
VTI1A-201ENST00000393077 METTL9Q9H1A3 318 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 GSTO2Q9H4Y5 243 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 TAS2R10Q9NYW0 307 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 KCNK7Q9Y2U2 307 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 MEIKINA0A087WXM9 373 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 CASC3O15234 703 aaKnown RBP7.25□□□□□ -1.25
VTI1A-201ENST00000393077 TLX2O43763 284 aaPredicted RBP7.25□□□□□ -1.25
VTI1A-201ENST00000393077 OR1I1O60431 355 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 ZNF432O94892 652 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 THP07101 528 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 SPI1P17947 270 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 MAGEB1P43366 347 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 PPM1FP49593 454 aaPredicted RBP7.25□□□□□ -1.25
VTI1A-201ENST00000393077 CEBPGP53567 150 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 FKBP1BP68106 108 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 PRKCZQ05513 592 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 PPIGQ13427 754 aaKnown RBP eCLIP7.25□□□□□ -1.251e-6■■■□□ 17.9
VTI1A-201ENST00000393077 IFI44LQ53G44 452 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 WDR53Q7Z5U6 358 aaPredicted RBP7.25□□□□□ -1.25
VTI1A-201ENST00000393077 ZNF546Q86UE3 836 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 ZDHHC17Q8IUH5 632 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 CARFQ8N187 725 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 OR11H7Q8NGC8 314 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 OR11H4Q8NGC9 324 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 IMP3Q9NV31 184 aaKnown RBP7.25□□□□□ -1.25
VTI1A-201ENST00000393077 RBM22Q9NW64 420 aaKnown RBP eCLIP7.25□□□□□ -1.25
VTI1A-201ENST00000393077 TRPV2Q9Y5S1 764 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 NAV1Q8NEY1 1877 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 IMPA2O14732 288 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 SMAD9O15198 467 aaKnown RBP7.25□□□□□ -1.25
VTI1A-201ENST00000393077 SEPT4O43236 478 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 OR2T1O43869 369 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 RAB36O95755 333 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 COX7A2P14406 83 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 ELNP15502 786 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 GKP32189 559 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 CCR1P32246 355 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 KDELR2P33947 212 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 KIR3DL1P43629 444 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 MECP2P51608 486 aaKnown RBP7.25□□□□□ -1.25
VTI1A-201ENST00000393077 CCL14Q16627 93 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 PDZD11Q5EBL8 140 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 CARD16Q5EG05 197 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 NCMAPQ5T1S8 102 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 MEDAGQ5VYS4 303 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 TRIM40Q6P9F5 258 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 MTSS1LQ765P7 747 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 SMIM15Q7Z3B0 74 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 REC114Q7Z4M0 266 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 KLHDC8BQ8IXV7 354 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 TMEM192Q8IY95 271 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 CRYBG2Q8N1P7 616 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 AQP11Q8NBQ7 271 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 OR10D4PQ8NGN7 298 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 TMEM163Q8TC26 289 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 SOCS4Q8WXH5 440 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 ZC3HAV1LQ96H79 300 aaKnown RBP7.25□□□□□ -1.25
VTI1A-201ENST00000393077 RSRP1Q9BUV0 290 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 TFB2MQ9H5Q4 396 aaKnown RBP7.25□□□□□ -1.25
VTI1A-201ENST00000393077 GOLGA2P5Q9HBQ8 144 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 C19orf12Q9NSK7 152 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 TMEM45AQ9NWC5 275 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 UTS2RQ9UKP6 389 aa7.25□□□□□ -1.25
VTI1A-201ENST00000393077 FARSAQ9Y285 508 aaKnown RBP7.25□□□□□ -1.25
VTI1A-201ENST00000393077 MRPL42Q9Y6G3 142 aaKnown RBP7.25□□□□□ -1.25
VTI1A-201ENST00000393077 A0A0B4J293 547 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 ZCWPW2A0A1B0GU75 182 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 MTMR11A4FU01 709 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 AGAP14A8MT82 685 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 AP4M1O00189 453 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 AGPAT2O15120 278 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 SOX14O95416 240 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 MMP3P08254 477 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 CNR2P34972 360 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 MAGEA3P43357 314 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 RGS4P49798 205 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 CDH11P55287 796 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 FOXA1P55317 472 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 MLLT11Q13015 90 aaPredicted RBP7.24□□□□□ -1.25
VTI1A-201ENST00000393077 TSTA3Q13630 321 aaPredicted RBP7.24□□□□□ -1.25
VTI1A-201ENST00000393077 HLXQ14774 488 aaPredicted RBP7.24□□□□□ -1.25
VTI1A-201ENST00000393077 HEPHL1Q6MZM0 1159 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 ULK3Q6PHR2 472 aa7.24□□□□□ -1.25
VTI1A-201ENST00000393077 DDX53Q86TM3 631 aaKnown RBP7.24□□□□□ -1.25
VTI1A-201ENST00000393077 SLC35F3Q8IY50 421 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms